Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 2.2e-67 258.8 130 100.0
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 9.5e-23 110.5 124 48.4
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 1.3e-19 100.1 110 46.4
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 1.3e-19 100.1 123 45.5
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 4.9e-19 98.2 108 47.2
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 6.4e-19 97.8 118 44.1
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 1.1e-18 97.1 112 46.4
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 5.4e-18 94.7 131 39.7
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 1.3e-16 90.1 109 44.0
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 3.0e-16 89.0 121 46.3
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 5.1e-16 88.2 126 39.7
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 1.5e-15 86.7 113 46.0
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.9e-15 86.3 105 45.7
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 3.3e-15 85.5 100 44.0
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 4.3e-15 85.1 105 39.0
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 4.3e-15 85.1 110 43.6
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 5.6e-15 84.7 113 39.8
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 7.3e-15 84.3 109 40.4
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 9.6e-15 84.0 108 42.6
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 1.6e-14 83.2 113 44.2
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 2.8e-14 82.4 118 42.4
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 2.8e-14 82.4 120 38.3
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.8e-14 82.4 136 39.7
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 3.6e-14 82.0 123 41.5
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 3.6e-14 82.0 109 40.4
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 6.2e-14 81.3 135 40.0
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 8.1e-14 80.9 127 38.6
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 8.1e-14 80.9 113 37.2
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 8.1e-14 80.9 113 38.1
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.4e-13 80.1 111 43.2
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 1.4e-13 80.1 104 39.4
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 2.4e-13 79.3 115 39.1
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 3.1e-13 79.0 116 40.5
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 3.1e-13 79.0 113 38.1
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 4.0e-13 78.6 113 38.1
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 4.0e-13 78.6 113 38.1
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 4.0e-13 78.6 130 35.4
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 5.3e-13 78.2 111 40.5
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 5.3e-13 78.2 109 38.5
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 5.3e-13 78.2 118 39.0
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 5.3e-13 78.2 110 40.0
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 1.2e-12 77.0 129 38.8
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 1.2e-12 77.0 114 43.9
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 1.2e-12 77.0 105 45.7
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 1.5e-12 76.6 109 41.3
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 1.5e-12 76.6 109 41.3
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 2.6e-12 75.9 105 38.1
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 4.4e-12 75.1 102 47.1
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 5.8e-12 74.7 108 41.7
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 7.6e-12 74.3 112 36.6
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 9.9e-12 73.9 111 37.8
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 1.3e-11 73.6 77 46.8
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 1.7e-11 73.2 133 36.8
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 2.2e-11 72.8 108 33.3
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 2.2e-11 72.8 111 38.7
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 6.4e-11 71.2 94 38.3
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 8.4e-11 70.9 118 40.7
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 8.4e-11 70.9 111 37.8
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 2.4e-10 69.3 112 38.4
QL10p006100 Quercus lobata HOM05D007296 ORTHO05D009201 3.2e-10 68.9 100 41.0
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 4.2e-10 68.6 117 35.9
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 7.1e-10 67.8 128 35.9
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 1.6e-09 66.6 116 34.5
Lalb_Chr07g0183081 Lupinus albus HOM05D007296 ORTHO05D009201 2.7e-09 65.9 105 36.2
Glyma.05G042900 Glycine max HOM05D007296 ORTHO05D009201 4.6e-09 65.1 129 31.8
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 4.6e-09 65.1 107 34.6
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 1.3e-08 63.5 72 44.4
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 1.3e-08 63.5 105 31.4
Phvul.003G206500 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 1.3e-08 63.5 125 32.0
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 3.9e-08 62.0 76 43.4
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 8.7e-08 60.8 107 36.4
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.1e-07 60.5 54 53.7
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 1.9e-07 59.7 65 41.5
VMungo1215G1852 Vigna mungo HOM05D007296 ORTHO05D009201 1.9e-07 59.7 113 31.0
FAN09G0682 Fragaria x ananassa HOM05D007296 ORTHO05D009201 2.5e-07 59.3 52 53.8
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 2.5e-07 59.3 129 37.2
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 4.3e-07 58.5 78 38.5
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 5.6e-07 58.2 119 37.8
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 5.6e-07 58.2 121 35.5
SalBow7G1031 Salvia bowleyana HOM05D007296 ORTHO05D009201 5.6e-07 58.2 99 42.4
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 7.3e-07 57.8 108 34.3
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 1.3e-06 57.0 85 36.5
FvH4_6g51980 Fragaria vesca HOM05D007296 ORTHO05D009201 2.1e-06 56.2 54 50.0
FAN14G0692 Fragaria x ananassa HOM05D007296 ORTHO05D009201 2.1e-06 56.2 54 50.0
BcaB08g36986 Brassica carinata HOM05D007296 ORTHO05D009201 2.8e-06 55.8 61 49.2
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 2.8e-06 55.8 113 35.4
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 3.6e-06 55.5 118 36.4
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 3.6e-06 55.5 86 33.7
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 6.2e-06 54.7 127 33.1
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 8.1e-06 54.3 127 33.1


User provided reference genes

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