Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01251 Aquilegia oxysepala HOM05D004782 ORTHO05D005498 1.0e-51 206.5 104 100.0
Aqoxy3G01250 Aquilegia oxysepala HOM05D004782 ORTHO05D005498 9.4e-13 77.0 92 50.0
Nn3g16678 Nelumbo nucifera HOM05D004782 ORTHO05D005498 2.1e-12 75.9 86 52.3
THA.LOC104802393 Tarenaya hassleriana HOM05D004782 ORTHO05D005498 4.6e-12 74.7 82 48.8
Phvul.008G228200 Phaseolus vulgaris HOM05D004782 ORTHO05D005498 1.4e-11 73.2 65 58.5
Manes.15G152300 Manihot esculenta HOM05D004782 ORTHO05D005498 6.7e-11 70.9 83 49.4
RcHm_v2.0_Chr2g0173401 Rosa chinensis HOM05D004782 ORTHO05D005498 8.8e-11 70.5 89 47.2
Lalb_Chr14g0362901 Lupinus albus HOM05D004782 ORTHO05D005498 2.0e-10 69.3 83 49.4
Psat5g038480 Pisum sativum HOM05D004782 ORTHO05D005498 2.0e-10 69.3 81 49.4
Ciclev10018402m.g Citrus clementina HOM05D004782 ORTHO05D005498 2.5e-10 68.9 65 56.9
FAN14G2962 Fragaria x ananassa HOM05D004782 ORTHO05D005498 2.5e-10 68.9 65 55.4
Cpa.g.sc130.76 Carica papaya HOM05D004782 ORTHO05D005498 3.3e-10 68.6 76 53.9
CiPaw.04G029900 Carya illinoinensis HOM05D004782 ORTHO05D005498 3.3e-10 68.6 73 52.1
FvH4_6g51920 Fragaria vesca HOM05D004782 ORTHO05D005498 4.3e-10 68.2 65 53.8
VMungo0647G2046 Vigna mungo HOM05D004782 ORTHO05D005498 4.3e-10 68.2 73 50.7
TAR374G0154 Trochodendron aralioides HOM05D004782 ORTHO05D005498 5.7e-10 67.8 89 43.8
Ca_07059_v3 Cicer arietinum L. HOM05D004782 ORTHO05D005498 7.4e-10 67.4 73 52.1
Cfa007334 Carpinus fangiana HOM05D004782 ORTHO05D005498 1.3e-09 66.6 62 56.5
Haze_14764 Corylus avellana HOM05D004782 ORTHO05D005498 1.3e-09 66.6 62 56.5
FAN05G5758 Fragaria x ananassa HOM05D004782 ORTHO05D005498 1.3e-09 66.6 65 52.3
Glyma.16G018100 Glycine max HOM05D004782 ORTHO05D005498 1.3e-09 66.6 76 50.0
Lj1g0001798 Lotus japonicus HOM05D004782 ORTHO05D005498 1.3e-09 66.6 62 56.5
MD09G1021700 Malus domestica HOM05D004782 ORTHO05D005498 1.3e-09 66.6 62 53.2
PGR142G1749 Punica granatum HOM05D004782 ORTHO05D005498 1.3e-09 66.6 65 50.8
TPR.G1089 Trifolium pratense HOM05D004782 ORTHO05D005498 1.3e-09 66.6 62 56.5
Prupe.3G294600 Prunus persica HOM05D004782 ORTHO05D005498 2.2e-09 65.9 62 53.2
CiPaw.03G046200 Carya illinoinensis HOM05D004782 ORTHO05D005498 2.8e-09 65.5 62 56.5
FAN09G1186 Fragaria x ananassa HOM05D004782 ORTHO05D005498 2.8e-09 65.5 78 48.7
Glyma.16G068500 Glycine max HOM05D004782 ORTHO05D005498 2.8e-09 65.5 79 46.8
Sabra16G0222000 Salix brachista HOM05D004782 ORTHO05D005498 2.8e-09 65.5 74 50.0
CANSAT01G0425 Cannabis sativa HOM05D004782 ORTHO05D005498 3.7e-09 65.1 62 54.8
Eucgr.I01726 Eucalyptus grandis HOM05D004782 ORTHO05D005498 3.7e-09 65.1 62 53.2
FAN02G4014 Fragaria x ananassa HOM05D004782 ORTHO05D005498 3.7e-09 65.1 65 52.3
Sabra15G0083700 Salix brachista HOM05D004782 ORTHO05D005498 3.7e-09 65.1 74 48.6
PSO017G6962 Papaver somniferum HOM05D004782 ORTHO05D005498 4.8e-09 64.7 90 47.8
ATR0122G021 Amborella trichopoda HOM05D004782 ORTHO05D005498 8.2e-09 63.9 93 44.1
QL02p073881 Quercus lobata HOM05D004782 ORTHO05D005498 8.2e-09 63.9 62 53.2
Medtr7g033120 Medicago truncatula HOM05D004782 ORTHO05D005498 1.1e-08 63.5 65 50.8
PSO478G2740 Papaver somniferum HOM05D004782 ORTHO05D005498 1.8e-08 62.8 85 48.2
Potri.001G342400 Populus trichocarpa HOM05D004782 ORTHO05D005498 1.8e-08 62.8 74 48.6
MD17G1021600 Malus domestica HOM05D004782 ORTHO05D005498 2.4e-08 62.4 76 48.7
MELO3C026593.2 Cucumis melo HOM05D004782 ORTHO05D005498 4.1e-08 61.6 62 46.8
Atru.chr6.2436 Acer truncatum HOM05D004782 ORTHO05D005498 5.3e-08 61.2 65 46.2
CsaV3_3G042920 Cucumis sativus L. HOM05D004782 ORTHO05D005498 5.3e-08 61.2 62 46.8
Dinv25722 Davidia involucrata HOM05D004782 ORTHO05D005498 5.3e-08 61.2 81 43.2
Sc03g0007250 Simmondsia chinensis HOM05D004782 ORTHO05D005498 5.3e-08 61.2 65 47.7
Dinv33420 Davidia involucrata HOM05D004782 ORTHO05D005498 6.9e-08 60.8 80 45.0
Gohir.A04G046350 Gossypium hirsutum HOM05D004782 ORTHO05D005498 9.1e-08 60.5 62 51.6
Gorai.011G094100 Gossypium raimondii HOM05D004782 ORTHO05D005498 9.1e-08 60.5 62 51.6
CARHR198870 Cardamine hirsuta HOM05D004782 ORTHO05D005498 1.2e-07 60.1 65 44.6
Gohir.A10G101700 Gossypium hirsutum HOM05D004782 ORTHO05D005498 1.2e-07 60.1 62 51.6
Gohir.D10G085900 Gossypium hirsutum HOM05D004782 ORTHO05D005498 1.2e-07 60.1 62 51.6
AT5G14440 Arabidopsis thaliana HOM05D004782 ORTHO05D005498 1.5e-07 59.7 65 44.6
COL.COLO4_29185 Corchorus olitorius HOM05D004782 ORTHO05D005498 1.5e-07 59.7 82 45.1
unitig_62.g23373 Utricularia gibba HOM05D004782 ORTHO05D005498 1.5e-07 59.7 74 45.9
Thecc.04G020400 Theobroma cacao HOM05D004782 ORTHO05D005498 2.0e-07 59.3 86 43.0
Carub.0006s1262 Capsella rubella HOM05D004782 ORTHO05D005498 2.6e-07 58.9 63 46.0
Duzib147G0999 Durio zibethinus HOM05D004782 ORTHO05D005498 2.6e-07 58.9 62 51.6
SGA_v2.0_scaffold135G34920 Striga asiatica HOM05D004782 ORTHO05D005498 2.6e-07 58.9 83 45.8
MBI06_g10164_MAGBIO Magnolia biondii HOM05D004782 ORTHO05D005498 3.4e-07 58.5 86 43.0
ClCG10G013750 Citrullus lanatus HOM05D004782 ORTHO05D005498 5.9e-07 57.8 61 47.5
Sed0010446 Sechium edule HOM05D004782 ORTHO05D005498 5.9e-07 57.8 62 43.5
AL6G25170 Arabidopsis lyrata HOM05D004782 ORTHO05D005498 7.7e-07 57.4 79 40.5
CDE09G1218 Ceratophyllum demersum HOM05D004782 ORTHO05D005498 7.7e-07 57.4 65 47.7
Aa31LG11G15220 Aethionema arabicum HOM05D004782 ORTHO05D005498 1.0e-06 57.0 76 40.8
AUR62028428 Chenopodium quinoa HOM05D004782 ORTHO05D005498 1.3e-06 56.6 65 46.2
DCAR_021737 Daucus carota HOM05D004782 ORTHO05D005498 1.3e-06 56.6 72 43.1
Cc07_g00060 Coffea canephora HOM05D004782 ORTHO05D005498 1.7e-06 56.2 79 41.8
SEGI_27694 Sequoiadendron giganteum HOM05D004782 ORTHO05D005498 1.7e-06 56.2 67 43.3
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 1.7e-06 56.2 94 41.5
BcaC03g13487 Brassica carinata HOM05D000631 ORTHO05D005498 2.2e-06 55.8 79 38.0
BcaC03g13488 Brassica carinata HOM05D004782 ORTHO05D005498 2.2e-06 55.8 79 38.0
BcaNung03155 Brassica carinata HOM05D004782 ORTHO05D005498 2.2e-06 55.8 79 38.0
Migut.H00022 Erythranthe guttata HOM05D004782 ORTHO05D005498 2.2e-06 55.8 82 41.5
PSO339G5508 Papaver somniferum HOM05D004782 ORTHO05D005498 2.2e-06 55.8 86 41.9
PGR083G1527 Punica granatum HOM05D004782 ORTHO05D005498 2.2e-06 55.8 61 44.3
Ah.02g128240 Amaranthus hybridus HOM05D004782 ORTHO05D005498 2.9e-06 55.5 62 45.2
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 3.8e-06 55.1 80 42.5
MSTRG.3133 Avicennia marina HOM05D004782 ORTHO05D005498 3.8e-06 55.1 82 36.6
AL7G49230 Arabidopsis lyrata HOM05D004782 ORTHO05D005498 5.0e-06 54.7 61 45.9
A02p02500 Brassica napus HOM05D004782 ORTHO05D005498 5.0e-06 54.7 65 40.0
BraA02t05220Z Brassica rapa HOM05D004782 ORTHO05D005498 5.0e-06 54.7 65 40.0
BraA03t09994Z Brassica rapa HOM05D004782 ORTHO05D005498 5.0e-06 54.7 79 39.2
Thhalv10014310m.g Eutrema salsugineum HOM05D004782 ORTHO05D005498 5.0e-06 54.7 79 39.2
Hma1.2p1_1563F.1_g290780 Hydrangea macrophylla HOM05D004782 ORTHO05D005498 5.0e-06 54.7 80 37.5
Sp6g29580 Schrenkiella parvula HOM05D004782 ORTHO05D005498 5.0e-06 54.7 79 38.0
C03p07650 Brassica napus HOM05D004782 ORTHO05D005498 6.5e-06 54.3 77 40.3
BolC3t13265H Brassica oleracea HOM05D004782 ORTHO05D005498 6.5e-06 54.3 77 40.3
Carub.0007s3495 Capsella rubella HOM05D004782 ORTHO05D005498 6.5e-06 54.3 74 44.6
ECA238G0280 Erigeron canadensis HOM05D004782 ORTHO05D005498 6.5e-06 54.3 88 33.0
vmacro18299 Vaccinium macrocarpon HOM05D004782 ORTHO05D005498 6.5e-06 54.3 87 37.9
BcaC03g13490 Brassica carinata HOM05D004782 ORTHO05D005498 8.5e-06 53.9 79 38.0
A03p06620 Brassica napus HOM05D004782 ORTHO05D005498 8.5e-06 53.9 79 39.2
C02p06750 Brassica napus HOM05D004782 ORTHO05D005498 8.5e-06 53.9 79 38.0
Hma1.2p1_1747F.1_g300620 Hydrangea macrophylla HOM05D004782 ORTHO05D005498 8.5e-06 53.9 80 37.5
Peaxi162Scf00420g00132 Petunia axillaris HOM05D004782 ORTHO05D005498 8.5e-06 53.9 88 40.9
TWI36G0764 Tripterygium wilfordii HOM05D004782 ORTHO05D005498 8.5e-06 53.9 62 45.2
HPP92_008082 Vanilla planifolia HOM05D004782 ORTHO05D005498 8.5e-06 53.9 71 42.3


User provided reference genes

Program Settings