Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 0.0e+00 1793.5 1019 100.0
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 1.6e-165 587.8 933 46.6
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 4.1e-145 520.0 1054 41.5
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 1.4e-140 505.0 1053 43.5
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 2.2e-138 497.7 1085 41.2
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 3.8e-135 486.9 916 43.4
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 9.8e-131 472.2 898 44.1
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 8.9e-124 449.1 925 42.3
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 2.0e-120 438.0 644 50.5
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 3.5e-120 437.2 890 41.7
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 3.5e-120 437.2 865 43.0
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 4.4e-115 420.2 891 41.3
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 9.8e-115 419.1 958 39.5
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 1.7e-114 418.3 883 39.9
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 3.2e-113 414.1 906 39.8
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 5.4e-113 413.3 940 38.6
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 4.6e-112 410.2 1050 38.5
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 1.1e-110 405.6 1076 39.6
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 2.1e-109 401.4 948 37.3
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 1.1e-108 399.1 983 39.6
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.4e-108 398.7 967 41.7
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 9.9e-107 392.5 971 38.2
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 6.4e-106 389.8 1016 37.6
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 1.1e-105 389.0 891 41.2
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 3.2e-105 387.5 1100 37.1
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 5.4e-105 386.7 912 38.7
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 2.3e-103 381.3 961 38.4
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 6.6e-103 379.8 969 37.5
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 8.6e-103 379.4 1036 39.5
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 2.1e-101 374.8 1047 37.6
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 8.1e-101 372.9 961 39.9
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 8.9e-100 369.4 810 40.2
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 2.0e-99 368.2 843 38.6
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 8.4e-98 362.8 880 38.0
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 1.2e-96 359.0 973 37.8
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 1.6e-96 358.6 768 37.9
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 3.5e-96 357.5 903 37.0
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 4.6e-96 357.1 883 39.3
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 3.0e-95 354.4 921 38.8
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 1.9e-94 351.7 932 35.7
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 2.5e-94 351.3 932 35.7
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 7.3e-94 349.7 998 37.2
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 1.3e-93 349.0 935 37.8
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 1.3e-93 349.0 964 38.5
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 2.4e-92 344.7 976 37.5
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 4.0e-92 344.0 1039 36.9
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 6.9e-92 343.2 1024 36.7
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 1.2e-91 342.4 919 35.1
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 2.6e-91 341.3 813 38.5
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 5.8e-91 340.1 793 38.8
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 7.6e-91 339.7 910 37.9
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 3.8e-90 337.4 885 38.3
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 6.4e-90 336.7 911 36.3
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 4.2e-89 334.0 946 36.5
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 4.2e-89 334.0 984 36.4
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 2.1e-88 331.6 583 42.4
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 1.3e-87 328.9 904 35.4
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 8.7e-87 326.2 738 43.9
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 1.1e-86 325.9 869 37.9
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 1.5e-86 325.5 737 38.5
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 2.5e-86 324.7 1006 35.8
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 1.3e-85 322.4 931 36.4
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 1.3e-85 322.4 959 36.5
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 9.0e-84 316.2 924 34.5
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 9.9e-83 312.8 912 36.8
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 3.2e-81 307.8 834 36.3
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 1.2e-75 289.3 945 34.5
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 3.4e-75 287.7 816 37.3
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 3.8e-74 284.3 904 34.8
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 6.5e-74 283.5 409 46.7
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 2.1e-72 278.5 918 34.0
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 3.3e-70 271.2 998 32.6
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 5.7e-70 270.4 939 34.3
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 6.2e-69 266.9 737 37.9
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 1.4e-68 265.8 797 33.8
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 7.6e-67 260.0 985 33.0
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 6.5e-66 256.9 960 33.0
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 8.4e-66 256.5 889 34.9
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 8.7e-63 246.5 597 39.4
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 2.2e-61 241.9 1013 32.4
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 4.8e-61 240.7 685 37.8
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 1.4e-57 229.2 926 32.3
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 5.5e-57 227.3 894 32.4
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 3.3e-54 218.0 878 31.2
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 4.5e-51 207.6 839 31.8
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 2.2e-50 205.3 967 31.0
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 1.4e-49 202.6 870 30.1
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.0e-47 196.4 924 30.5
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 5.1e-47 194.1 487 38.2
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 1.0e-42 179.9 884 29.1
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 8.5e-42 176.8 461 35.8
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 4.2e-41 174.5 960 30.4
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 3.1e-36 158.3 361 38.2
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 8.5e-34 150.2 508 34.3
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 2.7e-32 145.2 539 34.0
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 2.3e-31 142.1 384 38.8
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 1.7e-29 136.0 936 27.7
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 3.7e-29 134.8 906 28.3
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 2.4e-28 132.1 525 30.5
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 2.4e-28 132.1 525 30.5
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 3.5e-27 128.3 596 29.0
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 8.5e-26 123.6 900 27.2
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 6.1e-24 117.5 657 29.5
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 2.3e-23 115.5 285 37.5
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 3.0e-23 115.2 893 28.4
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 5.2e-23 114.4 249 38.2
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 7.5e-22 110.5 529 30.4
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 3.7e-21 108.2 893 25.4
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 1.8e-15 89.4 212 38.2
TPR.G3084 Trifolium pratense HOM05D002002 ORTHO05D012248 5.7e-14 84.3 96 55.2
GSVIVG01005755001 Vitis vinifera HOM05D002002 ORTHO05D008797 5.7e-14 84.3 98 57.1
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 2.9e-13 82.0 135 41.5
TPR.G24664 Trifolium pratense HOM05D002002 ORTHO05D008797 9.2e-12 77.0 74 62.2
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 1.2e-11 76.6 114 43.9
Lsat_1_v5_gn_0_41981 Lactuca sativa HOM05D002002 ORTHO05D008797 7.5e-06 57.4 92 40.2


User provided reference genes

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