Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 5.3e-177 624.4 348 100.0
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 5.2e-108 395.2 349 65.0
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 1.7e-106 390.2 357 62.5
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 2.2e-106 389.8 353 66.3
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 8.6e-103 377.9 361 60.9
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 1.5e-102 377.1 351 64.4
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 2.5e-102 376.3 354 60.2
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 1.6e-101 373.6 354 66.1
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 2.8e-101 372.9 351 64.4
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 2.3e-100 369.8 354 59.0
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 3.1e-100 369.4 352 63.9
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 6.8e-100 368.2 353 59.2
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 2.6e-99 366.3 359 62.1
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.7e-98 363.6 358 60.6
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 2.9e-98 362.8 360 57.2
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 8.3e-98 361.3 356 57.3
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 8.3e-98 361.3 358 60.6
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 8.3e-98 361.3 358 60.6
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 1.4e-97 360.5 358 59.8
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 1.4e-97 360.5 367 61.0
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 3.2e-97 359.4 352 62.8
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 1.2e-96 357.5 359 56.8
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 1.2e-96 357.5 354 62.4
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 1.2e-96 357.5 361 56.2
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 3.5e-96 355.9 358 58.7
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 4.6e-96 355.5 357 60.8
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 4.6e-96 355.5 354 55.9
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 1.0e-95 354.4 357 60.5
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.0e-95 354.4 358 58.4
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.0e-95 354.4 358 58.4
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 3.9e-95 352.4 358 58.4
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 5.0e-95 352.1 356 61.8
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 5.0e-95 352.1 381 56.7
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 6.6e-95 351.7 362 58.8
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 6.6e-95 351.7 362 58.8
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 8.6e-95 351.3 352 60.8
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 8.6e-95 351.3 362 57.7
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 1.9e-94 350.1 407 57.0
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 2.5e-94 349.7 352 61.4
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 5.6e-94 348.6 356 61.5
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 7.3e-94 348.2 365 55.9
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 1.8e-92 343.6 351 57.0
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 3.1e-92 342.8 355 61.4
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 6.8e-92 341.7 351 57.8
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 1.2e-91 340.9 362 55.0
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 5.8e-91 338.6 362 55.5
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 7.5e-91 338.2 359 57.4
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 9.8e-91 337.8 361 55.1
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 9.8e-91 337.8 370 60.3
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 9.8e-91 337.8 360 58.6
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 1.7e-90 337.0 362 54.4
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.7e-90 337.0 360 59.4
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.7e-90 337.0 360 60.8
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 2.2e-90 336.7 353 59.2
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 3.7e-90 335.9 354 61.3
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 4.9e-90 335.5 356 59.3
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 1.9e-89 333.6 358 54.2
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 9.2e-89 331.3 348 62.4
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 1.2e-88 330.9 369 53.4
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 2.1e-88 330.1 362 57.2
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 2.7e-88 329.7 359 54.6
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 6.6e-87 325.1 361 52.9
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 1.1e-86 324.3 334 59.0
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 1.9e-86 323.6 344 60.5
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 3.3e-86 322.8 357 54.9
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 3.3e-86 322.8 349 58.2
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 4.3e-86 322.4 348 57.5
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 7.3e-86 321.6 354 59.6
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 1.6e-85 320.5 360 56.4
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 2.8e-85 319.7 356 57.9
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 6.2e-85 318.5 348 53.2
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 6.2e-85 318.5 363 59.0
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 1.4e-84 317.4 359 52.9
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 5.2e-84 315.5 275 62.9
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 1.2e-83 314.3 358 57.3
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 1.2e-83 314.3 353 56.9
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 1.5e-83 313.9 190 78.9
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 3.4e-83 312.8 275 61.1
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 3.4e-83 312.8 365 52.6
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 7.6e-83 311.6 188 78.7
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 1.3e-82 310.8 394 54.6
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 1.7e-82 310.5 367 55.6
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 2.2e-82 310.1 362 58.0
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 2.2e-82 310.1 277 61.4
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 3.7e-82 309.3 349 53.9
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 4.1e-81 305.8 368 56.2
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 4.6e-80 302.4 363 53.4
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 6.0e-80 302.0 286 62.9
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 6.6e-79 298.5 357 50.7
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 1.1e-76 291.2 367 53.7
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 1.5e-75 287.3 365 51.0
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 5.8e-75 285.4 355 49.0
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 9.9e-75 284.6 350 48.3
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 4.9e-74 282.3 358 48.6
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 1.3e-71 274.2 431 44.8
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 4.4e-67 259.2 323 50.5
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 1.7e-66 257.3 281 55.2
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 2.1e-64 250.4 279 55.6
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 8.7e-63 245.0 282 59.6
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 3.3e-62 243.0 284 62.0
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 9.6e-62 241.5 192 63.5
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 8.1e-61 238.4 186 68.3
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 6.9e-60 235.3 282 52.8
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 2.0e-59 233.8 280 52.5
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 4.5e-59 232.6 282 52.1
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 9.3e-49 198.4 281 44.5
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 9.3e-49 198.4 173 52.6
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 1.8e-47 194.1 246 43.1
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 2.0e-43 180.6 188 47.3
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 3.4e-43 179.9 328 37.5
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 7.4e-22 109.0 81 65.4
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 2.8e-21 107.1 140 40.7
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 1.7e-18 97.8 138 38.4
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 1.2e-16 91.7 163 34.4
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 8.0e-16 89.0 187 30.5
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 2.0e-14 84.3 49 79.6
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 3.1e-12 77.0 72 50.0
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 6.5e-10 69.3 43 76.7
TAR625G0150 Trochodendron aralioides HOM05D006540 ORTHO05D008202 6.5e-10 69.3 94 53.2
Solyc05g013480.4 Solanum lycopersicum HOM05D006540 ORTHO05D008202 2.5e-09 67.4 199 47.2
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 9.4e-09 65.5 44 61.4


User provided reference genes

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