Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 0.0e+00 1405.2 723 100.0
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 2.5e-290 1001.9 719 70.9
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 3.4e-271 938.3 714 67.1
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 1.9e-269 932.6 714 67.4
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 4.6e-260 901.4 694 65.6
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 3.9e-251 871.7 676 66.4
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 3.9e-251 871.7 722 62.2
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 2.2e-249 865.9 721 61.9
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 7.7e-247 857.4 711 61.0
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 7.7e-247 857.4 711 61.0
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 6.5e-246 854.4 723 61.0
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 5.5e-245 851.3 723 62.5
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 3.0e-243 845.5 720 59.6
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 4.4e-242 841.6 724 60.6
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 2.8e-241 839.0 717 59.8
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 4.8e-241 838.2 721 60.9
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 3.5e-239 832.0 715 60.3
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 2.2e-238 829.3 727 59.1
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 3.8e-238 828.6 713 59.0
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 3.2e-237 825.5 728 59.1
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 2.1e-236 822.8 703 61.2
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 3.6e-236 822.0 716 58.9
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 4.7e-236 821.6 725 58.9
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 6.7e-235 817.8 724 58.3
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 5.7e-234 814.7 688 61.6
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 7.5e-234 814.3 747 57.0
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 2.8e-233 812.4 725 57.5
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 8.2e-233 810.8 727 57.9
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 1.8e-232 809.7 709 59.5
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 1.6e-231 806.6 714 58.4
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 2.7e-231 805.8 727 57.9
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 1.0e-230 803.9 723 58.5
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 1.7e-230 803.1 654 62.8
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 6.5e-230 801.2 727 56.9
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 1.5e-229 800.0 723 58.5
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 3.2e-229 798.9 719 55.9
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 4.2e-229 798.5 748 57.1
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 7.2e-229 797.7 749 57.1
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 4.7e-228 795.0 758 57.0
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 1.4e-227 793.5 723 56.6
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 4.0e-227 792.0 714 57.0
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 6.8e-227 791.2 723 57.7
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.2e-226 790.4 760 56.1
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.5e-226 790.0 749 56.3
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 2.8e-225 785.8 653 61.1
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 3.7e-225 785.4 714 57.0
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 1.4e-224 783.5 723 58.0
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 1.8e-224 783.1 716 55.6
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 2.7e-223 779.2 723 57.1
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 4.5e-223 778.5 726 55.9
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 1.9e-221 773.1 723 57.1
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 1.6e-220 770.0 721 56.3
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 2.8e-220 769.2 706 57.5
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 4.7e-220 768.5 711 56.5
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 1.4e-219 766.9 717 55.9
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 2.3e-219 766.1 721 54.9
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 3.0e-219 765.8 712 55.9
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 8.8e-219 764.2 722 54.4
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 1.2e-218 763.8 713 56.2
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 1.5e-218 763.5 723 54.8
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 1.7e-217 760.0 723 55.6
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 2.2e-217 759.6 723 55.2
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 3.7e-217 758.8 713 55.8
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 7.0e-216 754.6 624 61.5
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 1.6e-215 753.4 732 54.8
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 1.7e-214 750.0 685 57.7
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 2.3e-214 749.6 714 54.2
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 5.0e-214 748.4 699 55.9
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.5e-213 746.9 604 63.7
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 5.6e-213 745.0 674 56.1
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 5.6e-213 745.0 723 54.1
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 7.3e-213 744.6 719 54.7
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 1.6e-212 743.4 715 55.2
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 8.3e-209 731.1 703 55.3
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 1.4e-208 730.3 681 57.1
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 2.4e-208 729.6 709 54.2
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 3.0e-206 722.6 689 54.7
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 3.9e-206 722.2 742 52.6
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 4.3e-205 718.8 707 54.0
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 1.4e-203 713.8 726 53.9
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 5.2e-203 711.8 724 54.3
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 7.5e-202 708.0 723 54.8
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 1.7e-201 706.8 653 56.4
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 3.7e-201 705.7 724 54.1
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 8.3e-201 704.5 724 53.9
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 2.4e-200 703.0 724 53.6
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.6e-199 700.3 707 53.5
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 1.7e-198 696.8 725 53.4
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 3.9e-198 695.7 725 53.1
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 5.0e-198 695.3 726 53.2
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 5.0e-198 695.3 727 53.2
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 6.6e-198 694.9 725 53.2
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 4.3e-197 692.2 724 52.6
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 1.6e-196 690.3 709 53.3
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.5e-194 683.7 617 57.2
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 2.9e-193 679.5 795 47.8
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 2.3e-190 669.8 704 53.7
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 3.9e-190 669.1 619 57.0
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 1.1e-189 667.5 696 52.4
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.5e-189 667.2 647 56.4
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 8.4e-185 651.4 609 55.7
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 3.5e-183 646.0 590 58.0
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 7.8e-183 644.8 717 49.1
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.6e-180 637.1 722 50.8
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 1.9e-165 587.0 528 58.0
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 8.2e-156 555.1 527 57.1
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 2.1e-151 540.4 430 64.0
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 3.7e-148 529.6 637 48.4
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 7.9e-135 485.3 509 54.2
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.3e-132 478.0 428 56.3
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 2.6e-122 443.7 756 37.0
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 4.5e-122 443.0 723 42.0
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 4.4e-117 426.4 765 36.2
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 1.7e-113 414.5 720 36.2
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 6.3e-100 369.4 336 55.4
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 5.2e-94 349.7 331 55.0
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 5.4e-91 339.7 489 40.7
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 2.8e-79 300.8 309 56.0
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 2.7e-74 284.3 247 59.1
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 3.3e-56 224.2 291 47.4
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 3.6e-55 220.7 255 47.5
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 4.9e-52 210.3 273 46.5
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 1.9e-43 181.8 434 30.0
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 6.0e-34 150.2 160 50.0
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 8.2e-31 139.8 744 24.9
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 8.5e-28 129.8 152 45.4
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 1.4e-27 129.0 129 52.7
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 1.5e-16 92.4 307 29.0
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 9.1e-14 83.2 63 69.8
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 4.5e-13 80.9 69 53.6
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 2.1e-10 72.0 71 49.3
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 8.8e-09 66.6 124 35.5


User provided reference genes

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