Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 0.0e+00 1139.0 571 100.0
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 1.3e-244 849.7 593 72.5
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 8.8e-238 827.0 539 75.1
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 8.8e-238 827.0 536 76.5
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 1.5e-237 826.2 561 72.9
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 2.0e-237 825.9 535 76.1
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 3.7e-236 821.6 547 73.7
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 3.7e-236 821.6 535 76.4
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 1.1e-235 820.1 536 75.0
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.4e-235 819.7 536 74.4
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 5.3e-235 817.8 535 75.1
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 1.2e-234 816.6 534 75.1
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.6e-234 815.5 536 74.3
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 1.3e-233 813.1 604 68.5
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 3.8e-233 811.6 571 71.8
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 5.0e-233 811.2 535 74.0
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 1.1e-232 810.1 537 74.5
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 1.5e-232 809.7 537 74.5
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 2.5e-232 808.9 535 73.6
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 7.2e-232 807.4 518 75.9
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 7.2e-232 807.4 549 73.2
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 2.1e-231 805.8 535 74.4
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 3.6e-231 805.1 593 69.3
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 8.0e-231 803.9 590 69.0
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 5.2e-230 801.2 535 74.0
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 1.5e-229 799.7 535 74.0
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 3.3e-229 798.5 519 75.3
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 3.3e-229 798.5 535 73.6
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 4.4e-229 798.1 544 72.2
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 1.3e-228 796.6 535 73.3
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 2.2e-228 795.8 537 72.8
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 3.7e-228 795.0 588 69.9
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 3.7e-228 795.0 537 72.4
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 6.3e-228 794.3 586 69.1
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 6.3e-228 794.3 546 72.9
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 8.2e-228 793.9 574 69.9
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 1.1e-227 793.5 535 73.5
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 4.1e-227 791.6 518 73.9
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 4.1e-227 791.6 574 69.0
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 5.3e-227 791.2 535 73.3
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 7.0e-227 790.8 521 74.3
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 9.1e-227 790.4 535 72.1
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 9.1e-227 790.4 572 68.7
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 1.2e-226 790.0 534 73.6
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.6e-226 789.6 518 74.7
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 1.6e-226 789.6 520 72.9
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 2.0e-226 789.3 552 70.8
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.0e-226 789.3 574 69.0
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 2.6e-226 788.9 564 68.8
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 2.6e-226 788.9 535 72.5
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 3.5e-226 788.5 535 71.6
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 4.5e-226 788.1 534 73.8
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 5.9e-226 787.7 536 71.3
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 7.7e-226 787.3 535 73.8
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 7.7e-226 787.3 536 72.2
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 1.7e-225 786.2 562 70.1
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 2.2e-225 785.8 536 72.2
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 6.5e-225 784.3 569 69.1
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 1.9e-224 782.7 536 72.4
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.9e-224 782.7 535 70.5
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 2.5e-224 782.3 537 72.3
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 3.2e-224 781.9 537 72.3
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 3.2e-224 781.9 537 72.3
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 5.5e-224 781.2 536 71.6
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 5.5e-224 781.2 537 72.1
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 5.5e-224 781.2 537 72.1
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 2.7e-223 778.9 536 71.8
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 3.6e-223 778.5 560 69.6
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 4.7e-223 778.1 537 71.5
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.0e-222 776.9 574 68.3
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.3e-222 775.8 570 68.4
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 1.2e-221 773.5 572 68.0
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.5e-221 773.1 554 69.1
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.2e-220 769.2 536 71.1
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 4.8e-220 768.1 537 70.0
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 4.8e-220 768.1 518 71.8
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 1.4e-219 766.5 518 73.0
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 1.8e-219 766.1 525 72.6
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 3.1e-219 765.4 536 70.7
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 1.1e-216 756.9 532 70.9
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 1.1e-211 740.3 516 71.3
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 3.1e-211 738.8 606 63.2
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 2.0e-210 736.1 531 68.2
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 1.0e-209 733.8 536 70.0
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 1.7e-209 733.0 535 68.8
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 8.6e-209 730.7 573 66.5
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 1.8e-206 723.0 539 68.1
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 2.4e-203 712.6 534 67.4
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 4.1e-203 711.8 535 69.0
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 2.1e-199 699.5 461 72.5
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 4.0e-198 695.3 486 71.4
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 6.8e-198 694.5 535 66.2
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 2.4e-195 686.0 463 73.4
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 1.7e-193 679.9 446 74.2
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 2.3e-193 679.5 465 70.8
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 9.5e-192 674.1 484 68.2
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 5.2e-190 668.3 464 70.3
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 2.3e-185 652.9 508 64.4
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 1.8e-182 643.3 515 65.6
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 2.3e-182 642.9 531 63.3
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 4.0e-182 642.1 507 64.5
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.2e-181 640.6 487 65.9
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 2.6e-181 639.4 434 72.8
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 7.6e-181 637.9 531 61.0
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 2.9e-180 636.0 437 72.1
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 2.8e-175 619.4 573 58.8
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 9.3e-171 604.4 513 60.2
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 2.4e-166 589.7 444 65.1
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 2.4e-166 589.7 376 75.0
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 2.1e-138 496.9 361 69.8
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 1.1e-118 431.4 321 64.5
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-93 347.8 253 66.4
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.6e-77 294.7 200 71.0
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-61 240.0 274 46.7
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 9.9e-56 222.2 201 54.7
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 5.4e-46 189.9 143 68.5
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 6.2e-42 176.4 139 61.2
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 4.2e-38 163.7 100 74.0
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 1.6e-34 151.8 101 69.3
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.3e-31 142.1 101 64.4
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 1.3e-23 115.5 68 75.0
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 1.7e-23 115.2 82 69.5
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 9.3e-22 109.4 136 44.9
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 2.7e-21 107.8 73 69.9
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 1.0e-20 105.9 66 71.2
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 1.4e-17 95.5 117 48.7
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 1.4e-17 95.5 117 48.7
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 3.4e-16 90.9 119 47.1
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 3.4e-16 90.9 119 47.1
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 2.9e-15 87.8 67 64.2
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.5e-14 84.7 55 72.7
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 8.8e-12 76.3 96 46.9
SEGI_38231 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.0e-07 62.8 38 73.7


User provided reference genes

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