Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 7.3e-209 730.3 375 100.0
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 6.1e-46 189.1 350 37.4
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 5.3e-42 176.0 323 34.4
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 4.5e-41 172.9 318 35.2
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 5.9e-41 172.6 319 36.7
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 1.3e-40 171.4 355 35.5
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 4.2e-39 166.4 321 35.2
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 1.0e-37 161.8 332 34.0
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 5.2e-37 159.5 314 34.1
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 1.4e-34 151.4 305 35.4
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 7.7e-33 145.6 351 31.6
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 7.7e-33 145.6 348 31.9
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 3.8e-32 143.3 329 31.6
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 5.0e-32 142.9 320 33.4
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 2.5e-31 140.6 278 36.0
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 3.2e-31 140.2 281 33.1
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 1.6e-30 137.9 233 34.3
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 1.8e-29 134.4 378 27.2
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 5.2e-29 132.9 314 32.2
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 2.0e-28 131.0 321 30.5
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 1.7e-27 127.9 366 29.8
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 4.1e-26 123.2 312 26.6
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 2.9e-24 117.1 229 30.1
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 1.8e-21 107.8 167 36.5
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 4.0e-21 106.7 307 28.7
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 5.2e-21 106.3 306 30.4
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 8.9e-21 105.5 313 28.8
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 7.5e-20 102.4 305 28.5
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 1.7e-19 101.3 166 35.5
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 1.7e-19 101.3 353 28.0
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 2.9e-19 100.5 317 27.1
GSVIVG01028089001 Vitis vinifera HOM05D008757 ORTHO05D010583 3.7e-19 100.1 202 33.2
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 1.4e-18 98.2 317 27.8
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 8.0e-14 82.4 164 32.3
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 4.0e-13 80.1 133 35.3
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 2.0e-12 77.8 132 33.3
Thecc.01G310700 Theobroma cacao HOM05D008757 ORTHO05D010583 2.6e-12 77.4 96 43.8
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 1.7e-11 74.7 133 32.3
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 2.2e-11 74.3 308 25.6
AL5G45370 Arabidopsis lyrata HOM05D012658 ORTHO05D010583 3.7e-11 73.6 133 33.8
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 6.4e-11 72.8 133 32.3
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 1.1e-10 72.0 160 28.8
THA.LOC104817467 Tarenaya hassleriana HOM05D012658 ORTHO05D010583 1.1e-10 72.0 133 33.8
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 1.9e-10 71.2 164 32.9
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 9.2e-10 68.9 179 27.9
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.2e-09 68.6 175 26.3
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 2.0e-09 67.8 246 26.0
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 2.7e-09 67.4 232 25.0
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 7.8e-09 65.9 175 25.7
SMO329G0060 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 2.5e-07 60.8 135 28.1
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 2.8e-06 57.4 254 21.3
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 6.2e-06 56.2 227 26.9


User provided reference genes

Program Settings