Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 0.0e+00 3924.0 1981 100.0
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 0.0e+00 2532.3 2037 66.2
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 0.0e+00 2503.8 2015 66.0
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 0.0e+00 2495.3 1998 65.8
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 0.0e+00 2463.3 2004 65.3
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 0.0e+00 2444.1 2027 64.5
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 0.0e+00 2413.3 2015 63.9
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 0.0e+00 2392.5 2005 63.8
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 0.0e+00 2383.2 2057 62.7
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 0.0e+00 2381.7 1998 63.1
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 0.0e+00 2365.9 2004 63.9
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 0.0e+00 2358.6 2012 63.7
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 0.0e+00 2350.1 2134 60.9
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 0.0e+00 2335.8 2016 62.5
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 0.0e+00 2330.8 2009 63.0
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 0.0e+00 2324.7 2008 62.4
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 0.0e+00 2314.3 2021 61.9
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 0.0e+00 2297.3 2008 62.2
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 0.0e+00 2283.1 2004 61.4
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 0.0e+00 2281.1 1992 61.9
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 0.0e+00 2280.4 2004 61.0
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 0.0e+00 2274.2 1992 61.6
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 0.0e+00 2267.7 2007 61.7
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 0.0e+00 2265.0 2008 61.0
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 0.0e+00 2263.8 2004 61.2
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 0.0e+00 2245.3 1996 60.2
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 0.0e+00 2240.3 2005 60.4
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 2232.2 2020 60.0
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 0.0e+00 2225.7 2001 59.8
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 0.0e+00 2221.8 2004 59.7
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 0.0e+00 2216.8 2005 60.0
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 0.0e+00 2214.5 2000 60.0
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 0.0e+00 2213.7 2006 59.6
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 0.0e+00 2206.0 2114 57.1
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 2191.4 2046 58.9
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 0.0e+00 2188.3 1999 59.5
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 0.0e+00 2186.4 1999 59.5
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 0.0e+00 2183.7 2035 60.0
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 0.0e+00 2180.2 2075 58.2
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 0.0e+00 2179.8 1856 63.1
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 2179.1 2015 59.3
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 0.0e+00 2177.9 2010 59.7
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 0.0e+00 2176.4 2007 59.5
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 0.0e+00 2174.1 2010 59.3
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 0.0e+00 2170.2 2007 58.3
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 0.0e+00 2168.3 2010 59.7
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 0.0e+00 2163.7 2005 59.1
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 0.0e+00 2161.0 2003 58.9
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 0.0e+00 2144.0 2010 58.8
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 0.0e+00 2143.6 2001 59.4
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 0.0e+00 2139.0 2102 56.2
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 0.0e+00 2128.6 2007 58.4
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 0.0e+00 2128.2 2005 58.4
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 0.0e+00 2115.5 1997 59.2
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 0.0e+00 2110.5 1995 57.2
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 0.0e+00 2100.1 1997 58.1
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 0.0e+00 2100.1 2063 56.9
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 0.0e+00 2097.8 2005 58.0
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 0.0e+00 2093.9 2065 56.2
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 0.0e+00 2089.3 2002 58.0
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 0.0e+00 2080.8 1683 65.2
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 2065.8 2028 57.0
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 0.0e+00 2060.0 2000 57.1
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 0.0e+00 2047.7 1986 55.8
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 0.0e+00 2047.3 2008 56.9
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 0.0e+00 2027.3 1991 56.0
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 0.0e+00 2007.6 1992 55.3
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 0.0e+00 1993.0 1989 55.0
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 0.0e+00 1986.5 1996 55.0
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 0.0e+00 1986.1 1993 54.7
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 0.0e+00 1984.5 1993 54.6
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 0.0e+00 1983.8 1995 54.9
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 0.0e+00 1979.5 2042 54.8
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 0.0e+00 1953.7 2021 55.1
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 0.0e+00 1939.9 2006 54.0
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 0.0e+00 1926.4 2015 53.3
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1923.3 1984 53.8
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 0.0e+00 1921.4 1908 56.5
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1914.8 1983 53.6
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 0.0e+00 1912.5 1908 57.3
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1905.6 1988 53.6
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 0.0e+00 1901.7 1988 53.8
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 0.0e+00 1892.9 2013 52.9
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 0.0e+00 1891.7 2006 53.0
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 0.0e+00 1881.3 2153 51.1
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1876.7 1992 53.0
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 0.0e+00 1865.9 2021 52.6
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 0.0e+00 1844.7 1787 56.6
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 0.0e+00 1768.4 1669 57.6
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 0.0e+00 1735.7 1762 55.2
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 0.0e+00 1734.5 1988 51.0
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 0.0e+00 1701.0 2012 49.8
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 0.0e+00 1621.3 1432 62.2
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 0.0e+00 1574.7 1496 57.5
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 0.0e+00 1566.2 1368 61.5
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 0.0e+00 1546.6 1723 52.4
Aqoxy368s001 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 0.0e+00 1502.3 1042 77.6
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 0.0e+00 1485.7 1187 67.5
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 0.0e+00 1478.8 1894 46.3
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 0.0e+00 1349.7 2036 42.9
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 0.0e+00 1338.6 1554 48.8
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 0.0e+00 1338.6 1237 58.7
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 0.0e+00 1318.9 1414 52.9
SalBow6G3750 Salvia bowleyana HOM05D000764 ORTHO05D004953 0.0e+00 1201.4 1193 56.7
TAR623G0474 Trochodendron aralioides HOM05D000764 ORTHO05D004953 0.0e+00 1140.2 787 73.7
Cpa.g.sc119.44 Carica papaya HOM05D000764 ORTHO05D004953 9.3e-295 1018.1 778 67.1
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 3.5e-294 1016.1 2164 34.4
CDE10G0575 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 2.9e-288 996.5 979 56.0
COL.COLO4_07280 Corchorus olitorius HOM05D000764 ORTHO05D004953 4.6e-286 989.2 776 67.4
AUR62019164 Chenopodium quinoa HOM05D000764 ORTHO05D004953 7.2e-263 912.1 843 57.4
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 1.0e-261 908.3 2174 32.2
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 3.4e-244 850.1 1187 44.5
vmacro06915 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 8.1e-222 775.8 1293 40.8
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 2.9e-211 740.7 1988 31.9
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 3.0e-184 651.0 1949 29.3
SHI31301 Sapria himalayana HOM05D000764 ORTHO05D004953 1.1e-181 642.5 1022 40.5
Pp3c7_4610 Physcomitrium patens HOM05D000764 ORTHO05D004953 3.0e-176 624.4 1640 30.5
Os05g0447500 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 1.3e-171 609.0 593 55.6
Migut.L00371 Erythranthe guttata HOM05D000764 ORTHO05D004953 1.7e-163 582.0 429 67.6
SalBow6G2556 Salvia bowleyana HOM05D000764 ORTHO05D004953 2.2e-158 565.1 546 58.1
Migut.L00380 Erythranthe guttata HOM05D000764 ORTHO05D004953 3.0e-152 544.7 653 51.6
CDE10G0477 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 3.7e-142 511.1 783 43.7
Aqoxy6G02541 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 7.2e-138 496.9 285 90.9
Lj2A763G34 Lonicera japonica HOM05D000764 ORTHO05D004953 4.1e-133 481.1 512 56.1
Actinidia02700 Actinidia chinensis HOM05D000764 ORTHO05D004953 2.7e-132 478.4 320 72.5
SEGI_19391 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 5.4e-117 427.6 420 54.5
Actinidia02701 Actinidia chinensis HOM05D000764 ORTHO05D004953 1.8e-112 412.5 319 66.8
Os05g0447580 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 6.0e-108 397.5 361 59.0
SHI31298 Sapria himalayana HOM05D000764 ORTHO05D004953 4.7e-97 361.3 535 43.9
Actinidia15647 Actinidia chinensis HOM05D000764 ORTHO05D004953 1.8e-96 359.4 220 80.0
VMungo1080G0389 Vigna mungo HOM05D000764 ORTHO05D004953 1.2e-84 320.1 390 50.3
Hma1.2p1_0449F.1_g155100 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 2.7e-84 318.9 211 73.5
CiPaw.14G136600 Carya illinoinensis HOM05D000764 ORTHO05D004953 3.6e-81 308.5 246 64.6
VMungo1080G1023 Vigna mungo HOM05D000764 ORTHO05D004953 5.8e-79 301.2 188 77.1
CBR_g38308 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-75 290.4 1088 26.5
VMungo1080G1824 Vigna mungo HOM05D000764 ORTHO05D004953 9.0e-72 277.3 158 82.3
COL.COLO4_07282 Corchorus olitorius HOM05D000764 ORTHO05D004953 5.1e-67 261.5 153 80.4
vmacro06920 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 6.2e-65 254.6 153 78.4
SEGI_38078 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 7.4e-58 231.1 164 68.3
CDE10G0100 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 6.3e-57 228.0 333 41.1
Cpa.g.sc119.45 Carica papaya HOM05D000764 ORTHO05D004953 1.8e-56 226.5 196 64.8
Dinv39954 Davidia involucrata HOM05D000764 ORTHO05D004953 4.1e-56 225.3 292 44.5
CAN.G1237.46 Capsicum annuum HOM05D000764 ORTHO05D004953 1.5e-50 206.8 244 50.0
CDE10G1322 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 1.5e-50 206.8 125 76.0
HPP92_009741 Vanilla planifolia HOM05D000764 ORTHO05D004953 5.7e-50 204.9 610 29.8
CAN.G610.44 Capsicum annuum HOM05D000764 ORTHO05D004953 1.8e-48 199.9 291 42.3
CAN.G1237.45 Capsicum annuum HOM05D000764 ORTHO05D004953 4.5e-47 195.3 419 36.0
VMungo1383G3575 Vigna mungo HOM05D000764 ORTHO05D004953 2.7e-44 186.0 399 35.6
CAN.G1237.21 Capsicum annuum HOM05D000764 ORTHO05D004953 1.1e-42 180.6 256 44.1
Dinv39953 Davidia involucrata HOM05D000100 ORTHO05D000052 4.2e-37 162.2 123 70.7
Psat6g137480 Pisum sativum HOM05D000493 ORTHO05D004953 2.2e-33 149.8 334 35.9
Rhsim12G0118500 Rhododendron simsii HOM05D000764 ORTHO05D004953 1.6e-31 143.7 462 32.3
CAN.G1237.22 Capsicum annuum HOM05D000764 ORTHO05D004953 7.2e-29 134.8 96 69.8
Nn1g03529 Nelumbo nucifera HOM05D000764 ORTHO05D004953 1.3e-25 124.0 72 72.2
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 3.1e-24 119.4 126 51.6
Psat5g238800 Pisum sativum HOM05D000764 ORTHO05D002785 1.0e-19 104.4 84 67.9
Psat5g238960 Pisum sativum HOM05D000764 ORTHO05D002785 1.0e-19 104.4 84 67.9
SHI31300 Sapria himalayana HOM05D000764 ORTHO05D004953 1.3e-17 97.4 68 64.7
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 3.7e-17 95.9 154 44.8
Psat2g093280 Pisum sativum HOM05D002199 ORTHO05D007829 8.3e-17 94.7 154 44.2
CiPaw.14G136500 Carya illinoinensis HOM05D000764 ORTHO05D004953 7.0e-16 91.7 67 65.7
Thhalv10012088m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 9.1e-16 91.3 152 42.8
SHI31299 Sapria himalayana HOM05D000764 ORTHO05D004953 9.1e-16 91.3 137 44.5
Oeu017835.1 Olea europaea HOM05D000764 ORTHO05D004953 2.0e-15 90.1 110 47.3
SHI31294 Sapria himalayana HOM05D000764 ORTHO05D004953 1.3e-14 87.4 111 45.9
BcaC03g15090 Brassica carinata HOM05D000951 ORTHO05D032059 1.9e-13 83.6 44 77.3
BolC2t08722H Brassica oleracea HOM05D000951 ORTHO05D032059 1.9e-13 83.6 44 77.3
PSO339G0018 Papaver somniferum HOM05D000164 ORTHO05D000096 5.7e-10 72.0 86 48.8
Sc16g0012210 Simmondsia chinensis HOM05D000764 ORTHO05D004953 8.3e-09 68.2 165 33.9
CBR_g38302 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-08 67.4 92 41.3
SHI31296 Sapria himalayana HOM05D000764 ORTHO05D004953 9.2e-08 64.7 115 36.5
MELO3C030779.2 Cucumis melo HOM05D000764 ORTHO05D004953 2.3e-06 60.1 113 33.6


User provided reference genes

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