Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01103 Aquilegia oxysepala HOM05D003732 ORTHO05D014000 7.5e-98 360.5 184 100.0
Dinv24812 Davidia involucrata HOM05D003732 ORTHO05D014000 1.2e-74 283.5 184 77.7
GSVIVG01007696001 Vitis vinifera HOM05D003732 ORTHO05D014000 3.2e-72 275.4 184 73.9
Nn3g16769 Nelumbo nucifera HOM05D003732 ORTHO05D014000 2.1e-71 272.7 182 75.8
Haze_07546 Corylus avellana HOM05D003732 ORTHO05D014000 3.3e-69 265.4 182 70.9
Cfa019169 Carpinus fangiana HOM05D003732 ORTHO05D014000 1.2e-66 256.9 182 69.2
CDE07G2061 Ceratophyllum demersum HOM05D003732 ORTHO05D014000 9.9e-66 253.8 182 69.2
HPP92_021842 Vanilla planifolia HOM05D003732 ORTHO05D014000 1.3e-57 226.9 212 57.5
ATR1152G071 Amborella trichopoda HOM05D003732 ORTHO05D014000 4.9e-57 224.9 180 64.4
TAR374G1668 Trochodendron aralioides HOM05D003732 ORTHO05D014000 2.7e-47 192.6 134 73.1
AagrBONN_evm.TU.Sc2ySwM_228.5018 Anthoceros agrestis HOM05D003732 ORTHO05D014000 1.6e-39 166.8 159 53.5
Pp3c17_6460 Physcomitrium patens HOM05D003732 ORTHO05D014000 5.8e-34 148.3 155 49.7
Nn4g22676 Nelumbo nucifera HOM05D003732 ORTHO05D014000 4.8e-28 128.6 72 80.6
SEGI_14455 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 1.8e-22 110.2 94 57.4
Pp3c1_29590 Physcomitrium patens HOM05D003732 ORTHO05D004965 3.9e-22 109.0 153 43.8
SEGI_38076 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 1.7e-17 93.6 92 55.4
Migut.D02165 Erythranthe guttata HOM05D003732 ORTHO05D004965 1.6e-15 87.0 129 38.8
BcaC09g49713 Brassica carinata HOM05D003732 ORTHO05D004965 4.7e-15 85.5 129 41.1
QL01p035526 Quercus lobata HOM05D003732 ORTHO05D004965 4.7e-15 85.5 129 38.8
ClCG03G002100 Citrullus lanatus HOM05D003732 ORTHO05D004965 6.1e-15 85.1 129 39.5
ECA236G0640 Erigeron canadensis HOM05D003732 ORTHO05D004965 6.1e-15 85.1 127 41.7
Gorai.003G139600 Gossypium raimondii HOM05D003732 ORTHO05D004965 7.9e-15 84.7 132 39.4
Nitab4.5_0004465g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 7.9e-15 84.7 129 39.5
PSO339G6685 Papaver somniferum HOM05D003732 ORTHO05D004965 7.9e-15 84.7 127 40.9
PSO384G0746 Papaver somniferum HOM05D003732 ORTHO05D004965 7.9e-15 84.7 127 40.9
Aa31LG4G14990 Aethionema arabicum HOM05D003732 ORTHO05D004965 1.0e-14 84.3 129 40.3
Lsat_1_v5_gn_8_76381 Lactuca sativa HOM05D003732 ORTHO05D004965 1.4e-14 84.0 127 40.9
Sed0004042 Sechium edule HOM05D003732 ORTHO05D004965 1.4e-14 84.0 129 40.3
CSS0010801 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 1.8e-14 83.6 129 38.8
CSS0050219 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 1.8e-14 83.6 129 38.8
AUR62009702 Chenopodium quinoa HOM05D003732 ORTHO05D004965 1.8e-14 83.6 127 40.2
MELO3C026850.2 Cucumis melo HOM05D003732 ORTHO05D004965 1.8e-14 83.6 129 40.3
Thhalv10002573m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 1.8e-14 83.6 129 40.3
CSS0019034 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 2.3e-14 83.2 129 38.8
CAN.G84.24 Capsicum annuum HOM05D003732 ORTHO05D004965 2.3e-14 83.2 127 39.4
HanXRQChr06g0175491 Helianthus annuus HOM05D003732 ORTHO05D004965 2.3e-14 83.2 127 40.9
Pp3c9_8960 Physcomitrium patens HOM05D003732 ORTHO05D004965 2.3e-14 83.2 131 38.2
GSVIVG01025089001 Vitis vinifera HOM05D003732 ORTHO05D004965 2.3e-14 83.2 129 39.5
Gohir.D03G132600 Gossypium hirsutum HOM05D003732 ORTHO05D004965 3.0e-14 82.8 132 38.6
Ah.15g096680 Amaranthus hybridus HOM05D003732 ORTHO05D004965 3.9e-14 82.4 129 39.5
C01p33680 Brassica napus HOM05D003732 ORTHO05D004965 3.9e-14 82.4 130 41.5
Psat5g281400 Pisum sativum HOM05D003732 ORTHO05D004965 3.9e-14 82.4 129 39.5
Thecc.09G335200 Theobroma cacao HOM05D003732 ORTHO05D004965 3.9e-14 82.4 129 38.0
CsaV3_1G012760 Cucumis sativus L. HOM05D003732 ORTHO05D004965 5.1e-14 82.0 129 39.5
TPR.G11613 Trifolium pratense HOM05D003732 ORTHO05D004965 6.7e-14 81.6 129 39.5
BolC1t03315H Brassica oleracea HOM05D003732 ORTHO05D004965 8.8e-14 81.3 130 41.5
AUR62036244 Chenopodium quinoa HOM05D003732 ORTHO05D004965 8.8e-14 81.3 129 39.5
DCAR_005290 Daucus carota HOM05D003732 ORTHO05D004965 1.1e-13 80.9 129 38.8
Gohir.A03G035700 Gossypium hirsutum HOM05D003732 ORTHO05D004965 1.1e-13 80.9 131 39.7
TAR633G0632 Trochodendron aralioides HOM05D003732 ORTHO05D004965 1.1e-13 80.9 129 38.0
AT3G45770 Arabidopsis thaliana HOM05D003732 ORTHO05D004965 1.5e-13 80.5 129 38.0
BcaB05g24098 Brassica carinata HOM05D003732 ORTHO05D004965 1.5e-13 80.5 129 39.5
Cc01_g11890 Coffea canephora HOM05D003732 ORTHO05D004965 1.5e-13 80.5 127 37.8
Medtr2g095840 Medicago truncatula HOM05D003732 ORTHO05D004965 1.5e-13 80.5 129 39.5
Nitab4.5_0003743g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.5e-13 80.5 129 36.4
Nitab4.5_0004465g0030 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.5e-13 80.5 129 36.4
Hund18963 Selenicereus undatus HOM05D003732 ORTHO05D004965 1.5e-13 80.5 129 38.8
EL10Ac7g15885 Beta vulgaris HOM05D003732 ORTHO05D004965 2.0e-13 80.1 129 38.8
A01p26450 Brassica napus HOM05D003732 ORTHO05D004965 2.0e-13 80.1 130 40.8
BraA01t02569Z Brassica rapa HOM05D003732 ORTHO05D004965 2.0e-13 80.1 130 40.8
Carub.0005s1163 Capsella rubella HOM05D003732 ORTHO05D004965 2.0e-13 80.1 129 38.0
COL.COLO4_18395 Corchorus olitorius HOM05D003732 ORTHO05D004965 2.0e-13 80.1 129 38.8
Nitab4.5_0004465g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.0e-13 80.1 125 37.6
Prupe.6G090200 Prunus persica HOM05D003732 ORTHO05D004965 2.0e-13 80.1 129 38.0
CiPaw.13G104000 Carya illinoinensis HOM05D003732 ORTHO05D004965 2.6e-13 79.7 129 37.2
Ca_01368_v3 Cicer arietinum L. HOM05D003732 ORTHO05D004965 2.6e-13 79.7 129 38.8
RcHm_v2.0_Chr5g0061771 Rosa chinensis HOM05D003732 ORTHO05D004965 2.6e-13 79.7 129 37.2
arahy.Tifrunner.gnm1.ann1.58CB50 Arachis hypogaea HOM05D003732 ORTHO05D004965 3.3e-13 79.3 125 37.6
FvH4_3g34120 Fragaria vesca HOM05D003732 ORTHO05D004965 3.3e-13 79.3 129 37.2
HanXRQChr05g0133971 Helianthus annuus HOM05D003732 ORTHO05D004965 3.3e-13 79.3 127 39.4
PSO170G1826 Papaver somniferum HOM05D003732 ORTHO05D004965 3.3e-13 79.3 127 39.4
AL5G24450 Arabidopsis lyrata HOM05D003732 ORTHO05D004965 4.4e-13 79.0 129 38.0
HanXRQChr05g0133981 Helianthus annuus HOM05D003732 ORTHO05D004965 4.4e-13 79.0 127 38.6
MD03G1107400 Malus domestica HOM05D003732 ORTHO05D004965 4.4e-13 79.0 124 37.9
PGR102G1443 Punica granatum HOM05D003732 ORTHO05D004965 4.4e-13 79.0 129 35.7
CARHR149900 Cardamine hirsuta HOM05D003732 ORTHO05D004965 5.7e-13 78.6 129 38.0
Haze_23969 Corylus avellana HOM05D003732 ORTHO05D004965 5.7e-13 78.6 129 37.2
Duzib168G0288 Durio zibethinus HOM05D003732 ORTHO05D004965 5.7e-13 78.6 129 37.2
MBI19_g13322_MAGBIO Magnolia biondii HOM05D003732 ORTHO05D004965 5.7e-13 78.6 129 38.0
Peaxi162Scf00616g00312 Petunia axillaris HOM05D003732 ORTHO05D004965 5.7e-13 78.6 129 37.2
Phvul.L001386 Phaseolus vulgaris HOM05D003732 ORTHO05D004965 5.7e-13 78.6 125 39.2
SalBow3G0013 Salvia bowleyana HOM05D003732 ORTHO05D004965 5.7e-13 78.6 129 36.4
Sp5g15750 Schrenkiella parvula HOM05D003732 ORTHO05D004965 5.7e-13 78.6 129 38.8
SpUn0096_0020 Schrenkiella parvula HOM05D003732 ORTHO05D004965 5.7e-13 78.6 129 38.8
Zm00001eb171040 Zea mays HOM05D003732 ORTHO05D004965 5.7e-13 78.6 129 38.0
arahy.Tifrunner.gnm1.ann1.B493EM Arachis hypogaea HOM05D003732 ORTHO05D004965 9.7e-13 77.8 118 39.0
Ciclev10028610m.g Citrus clementina HOM05D003732 ORTHO05D004965 1.3e-12 77.4 129 35.7
Lj3g0021313 Lotus japonicus HOM05D003732 ORTHO05D004965 1.3e-12 77.4 125 39.2
VMungo1080G0314 Vigna mungo HOM05D003732 ORTHO05D004965 1.3e-12 77.4 125 38.4
CAN.G84.23 Capsicum annuum HOM05D003732 ORTHO05D004965 1.7e-12 77.0 130 39.2
Dinv06348 Davidia involucrata HOM05D003732 ORTHO05D004965 1.7e-12 77.0 129 35.7
Glyma.13G330100 Glycine max HOM05D003732 ORTHO05D004965 1.7e-12 77.0 125 38.4
Potri.001G233300 Populus trichocarpa HOM05D003732 ORTHO05D004965 1.7e-12 77.0 129 37.2
Sopen12g032610 Solanum pennellii HOM05D003732 ORTHO05D004965 1.7e-12 77.0 129 38.8
HPP92_018603 Vanilla planifolia HOM05D003732 ORTHO05D004965 1.7e-12 77.0 129 35.7
Oeu051855.1 Olea europaea HOM05D003732 ORTHO05D004965 2.2e-12 76.6 129 34.9
SEGI_28331 Sequoiadendron giganteum HOM05D003732 ORTHO05D004965 2.2e-12 76.6 129 38.0
Sopen11g030320 Solanum pennellii HOM05D003732 ORTHO05D004965 2.2e-12 76.6 129 38.0
CDE09G1079 Ceratophyllum demersum HOM05D003732 ORTHO05D004965 2.8e-12 76.3 132 35.6
Solyc12g096780.2 Solanum lycopersicum HOM05D003732 ORTHO05D004965 2.8e-12 76.3 129 38.8
unitig_736.g22424 Utricularia gibba HOM05D003732 ORTHO05D004965 3.7e-12 75.9 145 34.5
Cpa.g.sc139.33 Carica papaya HOM05D003732 ORTHO05D004965 4.8e-12 75.5 129 36.4
SGA_v2.0_scaffold316G48397 Striga asiatica HOM05D003732 ORTHO05D004965 4.8e-12 75.5 129 35.7
Atru.chr3.3750 Acer truncatum HOM05D003732 ORTHO05D004965 6.3e-12 75.1 129 34.9
CAN.G84.25 Capsicum annuum HOM05D003732 ORTHO05D004965 8.2e-12 74.7 129 36.4
Thhalv10025585m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 8.2e-12 74.7 112 39.3
Solyc11g072640.3 Solanum lycopersicum HOM05D003732 ORTHO05D004965 8.2e-12 74.7 129 35.7
Sopen11g030310 Solanum pennellii HOM05D003732 ORTHO05D004965 8.2e-12 74.7 129 35.7
PGSC0003DMG400025357 Solanum tuberosum HOM05D003732 ORTHO05D004965 8.2e-12 74.7 129 35.7
Nn2g10611 Nelumbo nucifera HOM05D003732 ORTHO05D004965 1.1e-11 74.3 129 37.2
ATR0594G235 Amborella trichopoda HOM05D003732 ORTHO05D004965 1.4e-11 73.9 127 35.4
Nitab4.5_0003743g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.4e-11 73.9 129 38.0
Manes.11G138400 Manihot esculenta HOM05D003732 ORTHO05D004965 1.8e-11 73.6 129 35.7
CBR_g29478 Chara braunii HOM05D003732 ORTHO05D004965 5.3e-11 72.0 130 35.4
ATR0594G008 Amborella trichopoda HOM05D003732 ORTHO05D004965 9.1e-11 71.2 127 35.4
TWI79G1305 Tripterygium wilfordii HOM05D003732 ORTHO05D004965 1.2e-10 70.9 129 34.9
FAN25G0838 Fragaria x ananassa HOM05D003732 ORTHO05D004965 2.0e-10 70.1 128 35.9
Sabra16G0139500 Salix brachista HOM05D003732 ORTHO05D004965 4.5e-10 68.9 146 32.9
Sc06g0008130 Simmondsia chinensis HOM05D003732 ORTHO05D004965 7.7e-10 68.2 129 34.1
vmacro14491 Vaccinium macrocarpon HOM05D003732 ORTHO05D004965 7.7e-10 68.2 147 31.3
FAN11G1631 Fragaria x ananassa HOM05D003732 ORTHO05D004965 1.0e-09 67.8 148 32.4
Hma1.2p1_2042F.1_g312240 Hydrangea macrophylla HOM05D003732 ORTHO05D004965 2.9e-09 66.2 146 30.8
Cre01.g035350 Chlamydomonas reinhardtii HOM05D003732 ORTHO05D004965 3.8e-09 65.9 114 34.2
FAN16G2257 Fragaria x ananassa HOM05D003732 ORTHO05D004965 6.5e-09 65.1 148 31.8
Peaxi162Scf00616g00313 Petunia axillaris HOM05D003732 ORTHO05D004965 1.5e-08 63.9 140 35.0
FAN21G0728 Fragaria x ananassa HOM05D003732 ORTHO05D004965 2.5e-08 63.2 148 31.1
CANSAT54G2866 Cannabis sativa HOM05D003732 ORTHO05D004965 4.2e-08 62.4 161 29.8
BcaB05g22412 Brassica carinata HOM05D003732 ORTHO05D004965 5.5e-08 62.0 129 37.2
Rhsim01G0223000 Rhododendron simsii HOM05D003732 ORTHO05D004965 3.0e-06 56.2 81 38.3
SHI43202 Sapria himalayana HOM05D003732 ORTHO05D004965 5.2e-06 55.5 109 39.4
Cfa024534 Carpinus fangiana HOM05D003732 ORTHO05D004965 8.8e-06 54.7 127 30.7


User provided reference genes

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