Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.7e-93 344.7 161 100.0
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 4.7e-80 301.2 161 83.9
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 4.7e-80 301.2 158 84.2
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 2.3e-79 298.9 161 83.2
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 2.0e-78 295.8 161 82.0
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.0e-78 295.8 161 82.0
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 3.4e-78 295.0 161 80.1
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 9.9e-78 293.5 160 80.6
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 2.2e-77 292.4 161 80.1
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 3.7e-77 291.6 161 82.6
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.4e-76 288.9 161 80.1
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.2e-76 288.5 158 81.0
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 4.1e-76 288.1 162 81.5
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 5.4e-76 287.7 161 77.0
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 5.4e-76 287.7 161 77.0
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 9.2e-76 287.0 161 77.0
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.2e-75 286.6 161 78.3
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 1.2e-75 286.6 161 78.9
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.6e-75 286.2 158 81.0
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 2.1e-75 285.8 159 79.2
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 2.1e-75 285.8 162 80.2
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 2.1e-75 285.8 157 79.6
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.1e-75 285.8 157 79.6
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.1e-75 285.8 157 79.6
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.7e-75 285.4 158 81.0
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 2.7e-75 285.4 161 79.5
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 3.5e-75 285.0 161 78.9
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 4.6e-75 284.6 161 76.4
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 4.6e-75 284.6 159 79.9
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 6.0e-75 284.3 161 75.8
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 6.0e-75 284.3 161 78.3
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 76.4
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.0e-74 283.5 161 75.8
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.0e-74 283.5 161 77.6
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 1.7e-74 282.7 161 77.6
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 1.7e-74 282.7 161 75.8
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.7e-74 282.7 161 75.8
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.3e-74 282.3 161 79.5
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.3e-74 282.3 160 77.5
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 2.3e-74 282.3 155 80.6
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 3.9e-74 281.6 161 78.9
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 3.9e-74 281.6 161 75.8
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 3.9e-74 281.6 158 79.1
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 3.9e-74 281.6 159 77.4
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 3.9e-74 281.6 155 80.0
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 6.6e-74 280.8 158 79.1
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 8.6e-74 280.4 162 75.9
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 8.6e-74 280.4 161 76.4
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.1e-73 280.0 152 80.9
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.1e-73 280.0 157 79.6
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.1e-73 280.0 157 79.6
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 1.1e-73 280.0 162 77.8
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.5e-73 279.6 151 80.8
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.9e-73 279.3 158 77.8
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 2.5e-73 278.9 161 73.9
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.5e-73 278.9 161 77.6
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.5e-73 278.9 161 77.6
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 2.5e-73 278.9 158 77.2
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.3e-73 278.5 151 81.5
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 3.3e-73 278.5 161 78.3
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.3e-73 278.1 157 79.0
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 4.3e-73 278.1 161 76.4
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 5.6e-73 277.7 157 76.4
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 7.3e-73 277.3 162 76.5
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 9.5e-73 276.9 169 72.2
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 9.5e-73 276.9 154 79.2
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 1.2e-72 276.6 160 76.9
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 2.1e-72 275.8 154 77.9
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 4.7e-72 274.6 167 71.9
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 4.7e-72 274.6 154 77.9
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 4.7e-72 274.6 162 76.5
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 1.1e-71 273.5 161 73.3
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.1e-71 273.5 161 76.4
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.4e-71 273.1 157 75.8
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 5.2e-71 271.2 161 75.2
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 6.8e-71 270.8 162 74.7
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 75.2
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 5.8e-70 267.7 161 73.9
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 7.6e-70 267.3 148 81.1
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.3e-69 266.5 161 74.5
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.7e-69 266.2 161 72.7
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 2.9e-69 265.4 161 71.4
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.8e-69 265.0 161 72.0
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 6.4e-69 264.2 161 73.9
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.9e-68 262.7 152 75.0
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 3.2e-68 261.9 160 75.0
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.7e-67 258.8 158 72.8
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 7.8e-67 257.3 214 57.5
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 1.0e-66 256.9 135 82.2
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.7e-66 256.1 155 69.7
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 1.9e-65 252.7 161 72.7
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.5e-65 252.3 155 69.0
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 4.7e-64 248.1 161 69.6
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 8.1e-64 247.3 149 71.1
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.1e-63 246.9 156 72.4
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 1.8e-63 246.1 138 78.3
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 3.1e-63 245.4 158 68.4
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 2.0e-62 242.7 138 77.5
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 2.6e-62 242.3 155 67.1
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 3.4e-62 241.9 138 75.4
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 7.1e-60 234.2 135 77.0
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.5e-59 231.9 152 71.1
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.7e-58 229.6 135 74.8
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.5e-57 226.5 132 81.1
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.6e-56 223.0 120 82.5
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 1.4e-55 219.9 121 79.3
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 1.7e-53 213.0 145 62.1
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.9e-52 209.5 139 62.6
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.2e-52 208.4 155 64.5
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.6e-51 206.5 183 56.3
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.7e-51 205.7 118 76.3
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 3.9e-50 201.8 113 78.8
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.5e-49 199.9 139 59.7
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 4.3e-49 198.4 116 75.0
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.6e-48 196.4 113 75.2
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 8.1e-48 194.1 108 77.8
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 3.1e-47 192.2 103 79.6
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 4.5e-46 188.3 115 73.0
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.0e-42 177.2 94 81.9
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.8e-40 169.1 135 63.7
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 4.0e-39 165.2 157 54.8
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 1.5e-38 163.3 165 50.9
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 1.0e-37 160.6 101 69.3
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 6.7e-34 147.9 85 78.8
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 2.0e-30 136.3 80 76.2
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 6.1e-27 124.8 73 75.3
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 7.2e-20 101.3 52 82.7
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.7e-16 90.1 60 63.3
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.7e-08 63.5 70 42.9


User provided reference genes

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