Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 1.1e-156 556.6 288 100.0
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 7.8e-110 401.0 303 71.0
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 2.5e-108 396.0 286 71.3
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 8.4e-104 380.9 267 70.4
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 3.2e-103 379.0 292 68.2
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 1.7e-101 373.2 267 68.9
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 1.3e-99 367.1 291 65.6
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 2.8e-99 365.9 298 63.1
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 2.8e-99 365.9 267 69.7
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 8.1e-99 364.4 290 65.2
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 1.4e-98 363.6 285 65.3
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 4.0e-98 362.1 270 67.0
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 5.3e-98 361.7 288 64.9
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 6.9e-98 361.3 283 66.8
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 6.9e-98 361.3 267 68.9
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 6.9e-98 361.3 288 64.9
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 9.0e-98 360.9 266 68.0
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 3.4e-97 359.0 293 62.8
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 3.4e-97 359.0 269 68.0
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 3.4e-97 359.0 269 68.0
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 7.6e-97 357.8 269 68.0
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 9.9e-97 357.5 262 67.9
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 1.3e-96 357.1 263 68.8
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 1.3e-96 357.1 284 66.2
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.7e-96 356.7 267 68.2
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 2.9e-96 355.9 264 66.7
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 2.9e-96 355.9 290 64.8
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 1.1e-95 354.0 307 63.2
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 2.4e-95 352.8 296 61.5
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 3.2e-95 352.4 287 64.1
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.2e-95 352.1 261 65.9
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 5.5e-95 351.7 283 65.0
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 5.5e-95 351.7 268 67.5
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 7.1e-95 351.3 266 66.2
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 9.3e-95 350.9 261 65.9
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 9.3e-95 350.9 285 63.9
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 1.2e-94 350.5 261 65.9
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 1.6e-94 350.1 267 67.8
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 1.6e-94 350.1 261 68.2
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 6.0e-94 348.2 260 68.5
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 6.0e-94 348.2 260 68.5
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 7.9e-94 347.8 237 70.0
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 1.8e-93 346.7 264 66.7
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 2.3e-93 346.3 286 61.5
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 3.9e-93 345.5 289 64.7
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 5.1e-93 345.1 290 63.8
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 8.7e-93 344.4 266 67.3
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 1.1e-92 344.0 229 74.2
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 1.1e-92 344.0 264 66.3
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 1.5e-92 343.6 229 73.4
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 9.6e-92 340.9 235 71.5
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 9.6e-92 340.9 264 65.5
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.3e-91 340.5 269 63.2
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 2.8e-91 339.3 294 62.9
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 3.7e-91 339.0 233 71.2
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 3.7e-91 339.0 242 70.7
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 8.1e-91 337.8 264 64.4
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 8.1e-91 337.8 264 64.4
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 8.1e-91 337.8 264 64.4
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 1.8e-90 336.7 258 65.9
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 2.4e-90 336.3 265 64.2
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 2.4e-90 336.3 265 64.2
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.4e-90 336.3 295 58.6
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 5.3e-90 335.1 258 66.3
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 1.5e-89 333.6 279 63.1
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 1.5e-89 333.6 254 66.5
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 2.0e-89 333.2 234 69.7
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 2.6e-89 332.8 262 64.9
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 4.5e-89 332.0 274 61.3
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 1.0e-88 330.9 269 63.9
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 1.0e-88 330.9 254 66.1
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 1.3e-88 330.5 262 64.5
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 1.3e-88 330.5 253 66.0
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 2.9e-88 329.3 259 65.3
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 3.8e-88 328.9 253 65.6
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 6.5e-88 328.2 253 65.6
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 2.5e-87 326.2 250 63.2
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 5.5e-87 325.1 287 59.9
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 9.3e-87 324.3 234 67.5
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 1.2e-86 323.9 234 69.2
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 2.1e-86 323.2 239 66.5
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 2.7e-86 322.8 246 63.0
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 2.7e-86 322.8 286 57.3
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 3.5e-86 322.4 269 63.2
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 7.9e-86 321.2 227 70.5
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 7.9e-86 321.2 227 70.5
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 3.0e-85 319.3 234 67.1
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 1.1e-84 317.4 297 56.6
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 2.5e-84 316.2 250 63.6
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 4.3e-84 315.5 249 63.1
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 2.8e-83 312.8 229 67.7
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 2.0e-81 306.6 229 65.5
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 1.1e-79 300.8 298 53.7
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 1.4e-79 300.4 238 63.4
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 4.6e-78 295.4 239 61.1
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 7.9e-78 294.7 261 59.8
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 5.7e-76 288.5 270 57.4
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 7.7e-73 278.1 279 54.8
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 1.8e-66 256.9 290 50.0
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 2.4e-66 256.5 249 54.6
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 1.2e-65 254.2 207 62.8
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 5.9e-57 225.3 177 65.0
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 5.0e-56 222.2 266 47.4
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 1.2e-46 191.0 134 65.7
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 8.0e-46 188.3 206 47.6
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 5.2e-45 185.7 134 62.7
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 1.5e-44 184.1 196 47.4
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 4.4e-44 182.6 203 50.7
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 9.8e-44 181.4 154 56.5
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 2.7e-41 173.3 239 40.6
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.1e-39 167.9 203 41.4
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 5.2e-37 159.1 153 52.9
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 3.7e-35 152.9 200 39.5
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 1.4e-34 151.0 138 60.1
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 1.2e-33 147.9 87 77.0
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 3.5e-25 119.8 92 67.4
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 4.6e-25 119.4 98 64.3
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 1.1e-23 114.8 87 64.4
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 9.8e-20 101.7 96 50.0
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 3.9e-16 89.7 52 76.9
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 6.8e-13 79.0 217 26.7
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 1.5e-12 77.8 51 64.7
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 3.4e-12 76.6 104 47.1
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 2.5e-07 60.5 34 79.4


User provided reference genes

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