Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00999 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 2.4e-43 178.7 109 100.0
Aqoxy3G00995 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 2.3e-22 109.0 75 81.3
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 8.0e-15 84.0 75 72.0
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 8.0e-15 84.0 74 77.0
CsaV3_1G008390 Cucumis sativus L. HOM05D003549 ORTHO05D004223 1.0e-14 83.6 75 77.3
Oeu000929.1 Olea europaea HOM05D003549 ORTHO05D004223 1.4e-14 83.2 79 73.4
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 1.8e-14 82.8 74 75.7
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.8e-14 82.8 74 73.0
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 2.3e-14 82.4 74 73.0
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 3.0e-14 82.0 74 74.3
GSVIVG01032498001 Vitis vinifera HOM05D003549 ORTHO05D004223 3.0e-14 82.0 74 70.3
ClCG01G013030 Citrullus lanatus HOM05D003549 ORTHO05D004223 4.0e-14 81.6 75 76.0
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 4.0e-14 81.6 75 64.0
Ca_16195_v3 Cicer arietinum L. HOM05D003549 ORTHO05D004223 6.8e-14 80.9 74 71.6
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 6.8e-14 80.9 74 75.7
TAR622G1417 Trochodendron aralioides HOM05D003549 ORTHO05D004223 6.8e-14 80.9 74 75.7
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 8.9e-14 80.5 74 75.7
Migut.D01775 Erythranthe guttata HOM05D003549 ORTHO05D004223 8.9e-14 80.5 75 73.3
Nn8g39923 Nelumbo nucifera HOM05D003549 ORTHO05D004223 8.9e-14 80.5 75 64.0
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 1.2e-13 80.1 74 74.3
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.2e-13 80.1 74 73.0
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 1.5e-13 79.7 75 65.3
QL02p076964 Quercus lobata HOM05D003549 ORTHO05D004223 1.5e-13 79.7 74 66.2
HanXRQChr16g0517241 Helianthus annuus HOM05D003549 ORTHO05D004223 2.0e-13 79.3 75 69.3
MBI15_g31119_MAGBIO Magnolia biondii HOM05D003549 ORTHO05D004223 2.0e-13 79.3 74 75.7
Nitab4.5_0000852g0140 Nicotiana tabacum HOM05D003549 ORTHO05D004223 2.0e-13 79.3 75 65.3
Nitab4.5_0003857g0060 Nicotiana tabacum HOM05D003549 ORTHO05D004223 2.0e-13 79.3 75 65.3
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 2.6e-13 79.0 74 68.9
arahy.Tifrunner.gnm1.ann1.G4GSC6 Arachis hypogaea HOM05D003549 ORTHO05D004223 3.4e-13 78.6 74 78.4
arahy.Tifrunner.gnm1.ann1.TT1NYY Arachis hypogaea HOM05D003549 ORTHO05D004223 3.4e-13 78.6 74 78.4
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 3.4e-13 78.6 74 62.2
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 4.4e-13 78.2 75 62.7
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 4.4e-13 78.2 74 70.3
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 4.4e-13 78.2 74 70.3
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 4.4e-13 78.2 74 70.3
Psat5g114160 Pisum sativum HOM05D003549 ORTHO05D004223 4.4e-13 78.2 74 71.6
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.8e-13 77.8 74 68.9
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.8e-13 77.8 74 68.9
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.8e-13 77.8 74 68.9
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 5.8e-13 77.8 72 70.8
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 9.8e-13 77.0 75 73.3
RcHm_v2.0_Chr7g0184521 Rosa chinensis HOM05D003549 ORTHO05D004223 9.8e-13 77.0 74 67.6
Cc04_g12860 Coffea canephora HOM05D003549 ORTHO05D004223 1.7e-12 76.3 74 63.5
Potri.017G066900 Populus trichocarpa HOM05D003549 ORTHO05D004223 2.2e-12 75.9 74 71.6
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 2.9e-12 75.5 74 70.3
Gohir.A07G060300 Gossypium hirsutum HOM05D003549 ORTHO05D004223 2.9e-12 75.5 73 72.6
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 2.9e-12 75.5 63 76.2
Medtr3g078130 Medicago truncatula HOM05D003549 ORTHO05D004223 2.9e-12 75.5 74 73.0
MD14G1183200 Malus domestica HOM05D003549 ORTHO05D004223 3.7e-12 75.1 63 76.2
Nn2g12408 Nelumbo nucifera HOM05D003549 ORTHO05D004223 3.7e-12 75.1 75 72.0
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 3.7e-12 75.1 74 70.3
Hma1.2p1_0176F.1_g077660 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 4.9e-12 74.7 74 70.3
Lsat_1_v5_gn_4_74920 Lactuca sativa HOM05D003549 ORTHO05D004223 4.9e-12 74.7 75 62.7
CSS0022405 Camellia sinensis var. sinensis HOM05D003549 ORTHO05D004223 6.4e-12 74.3 74 71.6
PSO017G2368 Papaver somniferum HOM05D003549 ORTHO05D004223 8.3e-12 73.9 74 60.8
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 1.1e-11 73.6 75 72.0
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 1.1e-11 73.6 74 60.8
PSO832G2372 Papaver somniferum HOM05D003549 ORTHO05D004223 1.4e-11 73.2 73 64.4
PSO063G4497 Papaver somniferum HOM05D003549 ORTHO05D004223 1.9e-11 72.8 73 61.6
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.9e-11 72.8 75 62.7
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.9e-11 72.8 75 62.7
Ciclev10023184m.g Citrus clementina HOM05D003549 ORTHO05D004223 2.4e-11 72.4 74 70.3
Dinv09155 Davidia involucrata HOM05D003549 ORTHO05D004223 3.2e-11 72.0 74 66.2
Duzib205G0517 Durio zibethinus HOM05D003549 ORTHO05D004223 3.2e-11 72.0 74 62.2
Solyc03g114170.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 3.2e-11 72.0 75 61.3
PGSC0003DMG400024492 Solanum tuberosum HOM05D003549 ORTHO05D004223 3.2e-11 72.0 75 61.3
Prupe.3G282400 Prunus persica HOM05D003549 ORTHO05D004223 4.1e-11 71.6 74 67.6
SalBow2G1727 Salvia bowleyana HOM05D003549 ORTHO05D004223 4.1e-11 71.6 75 56.0
Sed0023520 Sechium edule HOM05D003549 ORTHO05D004223 4.1e-11 71.6 75 72.0
Hund03159 Selenicereus undatus HOM05D003549 ORTHO05D004223 4.1e-11 71.6 75 65.3
CAN.G628.73 Capsicum annuum HOM05D003549 ORTHO05D004223 5.4e-11 71.2 75 65.3
Dinv33505 Davidia involucrata HOM05D003549 ORTHO05D004223 5.4e-11 71.2 74 58.1
ECA232G0606 Erigeron canadensis HOM05D003549 ORTHO05D004223 5.4e-11 71.2 76 64.5
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 5.4e-11 71.2 74 70.3
Ciclev10017382m.g Citrus clementina HOM05D003549 ORTHO05D004223 9.2e-11 70.5 74 64.9
FAN02G2804 Fragaria x ananassa HOM05D003549 ORTHO05D004223 9.2e-11 70.5 63 69.8
FAN05G0330 Fragaria x ananassa HOM05D003549 ORTHO05D004223 9.2e-11 70.5 63 69.8
FAN09G2996 Fragaria x ananassa HOM05D003549 ORTHO05D004223 9.2e-11 70.5 63 69.8
FAN09G4496 Fragaria x ananassa HOM05D003549 ORTHO05D004223 9.2e-11 70.5 63 69.8
RcHm_v2.0_Chr2g0170951 Rosa chinensis HOM05D003549 ORTHO05D004223 9.2e-11 70.5 74 64.9
Sopen03g033240 Solanum pennellii HOM05D003549 ORTHO05D004223 9.2e-11 70.5 75 60.0
Thecc.03G009800 Theobroma cacao HOM05D003549 ORTHO05D004223 9.2e-11 70.5 74 66.2
TPR.G30392 Trifolium pratense HOM05D003549 ORTHO05D004223 9.2e-11 70.5 82 68.3
HPP92_002194 Vanilla planifolia HOM05D003549 ORTHO05D004223 9.2e-11 70.5 74 64.9
ClCG08G009420 Citrullus lanatus HOM05D003549 ORTHO05D004223 1.6e-10 69.7 75 68.0
MELO3C026538.2 Cucumis melo HOM05D003549 ORTHO05D004223 1.6e-10 69.7 75 68.0
CsaV3_6G031560 Cucumis sativus L. HOM05D003549 ORTHO05D004223 1.6e-10 69.7 75 68.0
TWI15G0885 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.6e-10 69.7 75 60.0
FvH4_6g50520 Fragaria vesca HOM05D003549 ORTHO05D004223 2.0e-10 69.3 63 69.8
FAN14G1319 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.0e-10 69.3 63 69.8
Peaxi162Scf00535g00046 Petunia axillaris HOM05D003549 ORTHO05D004223 2.0e-10 69.3 75 56.0
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 2.7e-10 68.9 75 57.3
SGA_v2.0_scaffold90G27958 Striga asiatica HOM05D000215 ORTHO05D003454 2.7e-10 68.9 75 54.7
THA.LOC104805767 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 3.5e-10 68.6 75 66.7
DCAR_021678 Daucus carota HOM05D003549 ORTHO05D004223 4.6e-10 68.2 73 71.2
TAR371G0468 Trochodendron aralioides HOM05D003549 ORTHO05D004223 7.8e-10 67.4 74 70.3
ECA246G5096 Erigeron canadensis HOM05D003549 ORTHO05D004223 1.0e-09 67.0 75 62.7
DCAR_021565 Daucus carota HOM05D003549 ORTHO05D004223 1.3e-09 66.6 77 62.3
Solyc06g071390.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 1.3e-09 66.6 75 62.7
Sopen06g027670 Solanum pennellii HOM05D003549 ORTHO05D004223 1.3e-09 66.6 75 62.7
THA.LOC109116495 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 1.3e-09 66.6 74 59.5
AL2G18990 Arabidopsis lyrata HOM05D003549 ORTHO05D004223 1.7e-09 66.2 75 68.0
TWI60G0590 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 1.7e-09 66.2 75 57.3
PGSC0003DMG400027096 Solanum tuberosum HOM05D003549 ORTHO05D004223 2.3e-09 65.9 75 64.0
Atru.chr9.2446 Acer truncatum HOM05D003549 ORTHO05D004223 3.0e-09 65.5 50 72.0
AL8G14410 Arabidopsis lyrata HOM05D003549 ORTHO05D004223 3.0e-09 65.5 75 65.3
Manes.14G067300 Manihot esculenta HOM05D003549 ORTHO05D004223 3.0e-09 65.5 76 67.1
Aa31LG2G1940 Aethionema arabicum HOM05D003549 ORTHO05D004223 6.6e-09 64.3 75 61.3
Sp5g19250 Schrenkiella parvula HOM05D003549 ORTHO05D004223 6.6e-09 64.3 75 68.0
Thhalv10022469m.g Eutrema salsugineum HOM05D003549 ORTHO05D004223 8.6e-09 63.9 75 69.3
BcaB03g15337 Brassica carinata HOM05D003549 ORTHO05D004223 1.1e-08 63.5 75 60.0
CANSAT64G1109 Cannabis sativa HOM05D003549 ORTHO05D004223 1.5e-08 63.2 74 66.2
Duzib084G0774 Durio zibethinus HOM05D003549 ORTHO05D004223 1.9e-08 62.8 74 58.1
THA.LOC104823782 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 1.9e-08 62.8 75 64.0
Manes.06G103400 Manihot esculenta HOM05D003549 ORTHO05D004223 2.5e-08 62.4 49 69.4
Cpa.g.sc1914.1 Carica papaya HOM05D003549 ORTHO05D004223 3.3e-08 62.0 48 70.8
SalBow5G5409 Salvia bowleyana HOM05D003549 ORTHO05D004223 4.3e-08 61.6 74 60.8
Zm00001eb332940 Zea mays HOM05D003549 ORTHO05D004223 4.3e-08 61.6 64 56.2
CARHR049490 Cardamine hirsuta HOM05D003549 ORTHO05D004223 5.6e-08 61.2 66 65.2
Sc04g0001880 Simmondsia chinensis HOM05D003549 ORTHO05D004223 7.3e-08 60.8 76 59.2
CAN.G208.13 Capsicum annuum HOM05D003549 ORTHO05D004223 1.6e-07 59.7 85 43.5
ECA247G2394 Erigeron canadensis HOM05D003549 ORTHO05D004223 2.1e-07 59.3 74 60.8
Peaxi162Scf00689g00329 Petunia axillaris HOM05D003549 ORTHO05D004223 2.1e-07 59.3 75 61.3
PGR083G2145 Punica granatum HOM05D003549 ORTHO05D004223 2.1e-07 59.3 74 64.9
CAN.G781.29 Capsicum annuum HOM05D003549 ORTHO05D004223 2.8e-07 58.9 75 58.7
Lalb_Chr11g0071151 Lupinus albus HOM05D003549 ORTHO05D004223 2.8e-07 58.9 74 67.6
Carub.0003s3029 Capsella rubella HOM05D003549 ORTHO05D004223 3.6e-07 58.5 74 63.5
unitig_26.g9627 Utricularia gibba HOM05D000915 ORTHO05D001662 4.7e-07 58.2 69 53.6
A07p32720 Brassica napus HOM05D003549 ORTHO05D004223 6.2e-07 57.8 72 62.5
C06p38930 Brassica napus HOM05D003549 ORTHO05D004223 6.2e-07 57.8 72 62.5
BolC6t38985H Brassica oleracea HOM05D003549 ORTHO05D004223 6.2e-07 57.8 72 62.5
BraA07t30898Z Brassica rapa HOM05D003549 ORTHO05D004223 6.2e-07 57.8 72 62.5
Rhsim08G0170600 Rhododendron simsii HOM05D003549 ORTHO05D004223 6.2e-07 57.8 77 53.2
COL.COLO4_34052 Corchorus olitorius HOM05D003549 ORTHO05D004223 8.0e-07 57.4 74 64.9
Duzib068G0952 Durio zibethinus HOM05D003549 ORTHO05D004223 1.1e-06 57.0 80 58.8
Os01g0273000 Oryza sativa ssp. japonica HOM05D003549 ORTHO05D004223 1.1e-06 57.0 75 50.7
Sc12g0005420 Simmondsia chinensis HOM05D003549 ORTHO05D004223 1.1e-06 57.0 73 60.3
HanXRQChr02g0037231 Helianthus annuus HOM05D003549 ORTHO05D004223 1.4e-06 56.6 73 64.4
CAN.G650.26 Capsicum annuum HOM05D003549 ORTHO05D004223 1.8e-06 56.2 50 60.0
SMO139G0002 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 3.1e-06 55.5 73 58.9
Hma1.2p1_0802F.1_g220520 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 5.2e-06 54.7 69 47.8
Aqoxy3G02997 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 6.8e-06 54.3 72 56.9
AT5G45010 Arabidopsis thaliana HOM05D003549 ORTHO05D004223 6.8e-06 54.3 75 61.3
Eucgr.K02857 Eucalyptus grandis HOM05D003549 ORTHO05D004223 8.9e-06 53.9 70 62.9


User provided reference genes

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