Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 3.0e-156 555.1 264 100.0
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 9.7e-123 443.7 262 78.6
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 1.4e-118 429.9 262 74.8
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.1e-113 413.7 253 76.3
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 1.0e-111 407.1 262 69.5
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 1.6e-109 399.8 262 67.6
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 3.6e-109 398.7 262 69.8
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 1.0e-108 397.1 256 72.3
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 3.0e-108 395.6 262 69.1
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 3.0e-108 395.6 262 66.8
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 5.7e-107 391.3 256 70.3
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 9.7e-107 390.6 253 71.1
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.3e-106 390.2 253 69.2
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.2e-106 389.4 253 69.2
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 1.1e-105 387.1 262 66.0
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.1e-105 387.1 262 69.5
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 1.4e-105 386.7 256 69.1
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 1.4e-105 386.7 256 69.1
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 3.1e-105 385.6 263 68.1
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 4.1e-105 385.2 259 69.1
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 4.1e-105 385.2 253 68.8
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 4.1e-105 385.2 262 67.2
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 1.2e-104 383.6 225 77.3
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 4.5e-104 381.7 262 66.0
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 7.7e-104 380.9 264 67.8
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 1.3e-103 380.2 254 68.5
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 2.9e-103 379.0 262 67.6
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 3.8e-103 378.6 262 64.9
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 5.0e-103 378.3 253 68.4
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 8.5e-103 377.5 250 69.2
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.9e-102 376.3 253 67.2
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 5.5e-102 374.8 262 65.3
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 9.4e-102 374.0 255 65.9
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 2.7e-101 372.5 262 66.0
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 4.0e-100 368.6 263 63.5
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 2.6e-99 365.9 253 66.8
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 7.5e-99 364.4 253 66.8
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 1.3e-98 363.6 253 66.0
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 2.2e-98 362.8 253 66.4
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 2.2e-98 362.8 264 65.2
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.8e-98 362.5 253 66.0
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 1.1e-97 360.5 262 64.1
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 2.4e-97 359.4 254 64.6
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 2.4e-97 359.4 266 63.9
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 3.1e-97 359.0 253 63.6
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 2.0e-96 356.3 263 62.7
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 3.5e-96 355.5 254 64.6
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 3.5e-96 355.5 257 63.8
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.5e-96 355.1 256 64.1
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 5.9e-96 354.8 256 63.7
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.7e-95 353.2 256 63.7
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.9e-95 352.4 256 63.7
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 5.0e-95 351.7 296 57.1
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 8.5e-95 350.9 254 64.2
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 4.2e-94 348.6 220 72.7
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 1.6e-93 346.7 254 63.0
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 1.6e-93 346.7 256 63.3
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 2.1e-93 346.3 264 62.1
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 8.8e-92 340.9 254 62.2
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 2.8e-90 335.9 222 67.1
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.4e-89 333.6 248 62.1
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 1.8e-89 333.2 266 60.2
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 1.6e-88 330.1 253 62.1
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 4.5e-88 328.6 221 69.2
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 1.0e-87 327.4 254 59.4
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 5.0e-87 325.1 254 59.1
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 2.5e-86 322.8 253 59.7
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 1.6e-85 320.1 255 60.0
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 2.2e-82 309.7 254 59.4
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 2.4e-81 306.2 273 56.4
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 5.9e-80 301.6 253 57.3
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 3.8e-79 298.9 224 62.1
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.4e-73 279.6 179 72.6
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 2.4e-73 279.6 263 52.9
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 5.2e-68 261.9 178 68.5
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 4.0e-60 235.7 179 60.3
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 2.6e-59 233.0 173 63.6
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 2.6e-59 233.0 173 63.6
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 2.8e-53 213.0 181 58.0
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 1.7e-50 203.8 282 41.1
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 9.2e-49 198.0 132 65.2
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 1.0e-47 194.5 161 56.5
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.1e-46 191.0 121 70.2
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 3.3e-46 189.5 193 49.7
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 4.9e-42 175.6 131 61.1
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 8.1e-37 158.3 143 51.0
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 2.4e-33 146.7 100 64.0
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 1.2e-32 144.4 106 59.4
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.0e-32 142.1 118 55.9
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 3.3e-30 136.3 315 30.2
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 9.6e-30 134.8 315 30.2
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 2.3e-23 113.6 97 55.7
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.2e-19 101.3 59 72.9
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 4.5e-19 99.4 59 71.2
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 8.4e-18 95.1 89 51.7
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 2.7e-16 90.1 109 45.9
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 1.6e-13 80.9 75 53.3


User provided reference genes

Program Settings