Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 3.9e-38 161.0 83 100.0
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 2.7e-31 138.3 83 85.5
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 1.4e-30 136.0 83 83.1
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 1.8e-30 135.6 83 84.3
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 2.3e-30 135.2 80 86.2
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 8.8e-30 133.3 86 80.2
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 1.5e-29 132.5 80 82.5
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 4.4e-29 131.0 74 86.5
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 4.4e-29 131.0 83 80.7
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 7.4e-29 130.2 80 82.5
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 1.3e-28 129.4 74 83.8
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 1.7e-28 129.0 79 78.5
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.7e-28 129.0 79 78.5
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 2.2e-28 128.6 77 84.4
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 2.8e-28 128.3 79 81.0
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 3.7e-28 127.9 80 83.8
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.7e-28 127.9 80 83.8
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.7e-28 127.9 80 83.8
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.7e-28 127.9 80 83.8
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.7e-28 127.9 80 83.8
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.7e-28 127.9 80 83.8
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 3.7e-28 127.9 77 84.4
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 4.8e-28 127.5 74 86.5
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 4.8e-28 127.5 80 77.5
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 8.2e-28 126.7 69 89.9
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 8.2e-28 126.7 80 78.8
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 8.2e-28 126.7 80 78.8
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.1e-27 126.3 83 77.1
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 1.1e-27 126.3 77 84.4
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 1.1e-27 126.3 77 83.1
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.1e-27 126.3 80 80.0
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 1.1e-27 126.3 77 77.9
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.1e-27 126.3 78 79.5
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.4e-27 125.9 69 88.4
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 1.8e-27 125.6 75 84.0
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 4.1e-27 124.4 77 83.1
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 4.1e-27 124.4 78 79.5
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 5.3e-27 124.0 80 80.0
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 5.3e-27 124.0 72 84.7
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 7.0e-27 123.6 75 78.7
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 9.1e-27 123.2 80 77.5
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 9.1e-27 123.2 77 76.6
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 9.1e-27 123.2 71 84.5
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 1.6e-26 122.5 80 78.8
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 1.6e-26 122.5 80 76.2
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 1.6e-26 122.5 80 76.2
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 2.0e-26 122.1 69 85.5
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 2.0e-26 122.1 76 80.3
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 2.0e-26 122.1 75 78.7
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 2.6e-26 121.7 64 92.2
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 2.6e-26 121.7 70 84.3
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 3.5e-26 121.3 70 81.4
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 3.5e-26 121.3 70 81.4
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 3.5e-26 121.3 70 81.4
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 3.5e-26 121.3 75 76.0
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 3.5e-26 121.3 75 78.7
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 3.5e-26 121.3 75 78.7
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 3.5e-26 121.3 69 88.4
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 3.5e-26 121.3 70 81.4
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 4.5e-26 120.9 70 82.9
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 4.5e-26 120.9 75 78.7
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 5.9e-26 120.6 70 81.4
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 5.9e-26 120.6 70 81.4
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 5.9e-26 120.6 70 81.4
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 5.9e-26 120.6 70 81.4
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 5.9e-26 120.6 70 81.4
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 5.9e-26 120.6 69 84.1
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 5.9e-26 120.6 77 77.9
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 5.9e-26 120.6 77 79.2
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 1.0e-25 119.8 77 77.9
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 1.0e-25 119.8 69 81.2
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.0e-25 119.8 73 82.2
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 1.3e-25 119.4 77 79.2
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 1.3e-25 119.4 77 77.9
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 1.3e-25 119.4 77 79.2
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 1.7e-25 119.0 70 80.0
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 2.2e-25 118.6 75 78.7
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 3.8e-25 117.9 76 80.3
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 8.5e-25 116.7 97 64.9
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 8.5e-25 116.7 70 80.0
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 1.1e-24 116.3 75 77.3
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 4.2e-24 114.4 78 74.4
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 4.2e-24 114.4 78 74.4
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 4.2e-24 114.4 72 79.2
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 5.5e-24 114.0 89 68.5
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 7.2e-24 113.6 67 80.6
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 7.2e-24 113.6 70 81.4
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 1.2e-23 112.8 70 78.6
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 1.6e-23 112.5 83 69.9
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 2.1e-23 112.1 69 84.1
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 68.8
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.4e-22 109.4 77 70.1
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 1.4e-22 109.4 77 70.1
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 2.3e-22 108.6 96 63.5
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 4.0e-22 107.8 77 68.8
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 8.8e-22 106.7 77 64.9
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 8.8e-22 106.7 64 85.9
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 2.6e-21 105.1 65 83.1
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 5.7e-21 104.0 74 67.6
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.3e-20 102.8 68 77.9
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 2.2e-20 102.1 158 43.7
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 4.8e-20 100.9 76 61.8
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 6.3e-20 100.5 68 75.0
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 8.2e-20 100.1 62 77.4
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 1.1e-19 99.8 75 69.3
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 7.0e-19 97.1 50 98.0
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 2.7e-18 95.1 150 42.7
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 2.7e-18 95.1 55 83.6
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 2.7e-18 95.1 51 94.1
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 4.5e-18 94.4 55 87.3
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 6.5e-17 90.5 52 88.5
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 1.1e-16 89.7 122 45.1
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 3.2e-16 88.2 65 67.7
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.2e-15 86.3 62 72.6
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 4.7e-15 84.3 79 57.0
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.4e-14 82.8 77 54.5
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.8e-14 82.4 68 63.2
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 2.6e-13 78.6 64 65.6
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 7.5e-13 77.0 67 64.2
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 2.8e-12 75.1 68 52.9
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 7.7e-10 67.0 37 89.2
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 1.0e-09 66.6 38 92.1
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 2.9e-09 65.1 58 60.3
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 6.1e-07 57.4 34 85.3


User provided reference genes

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