Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 3.9e-174 614.8 328 100.0
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 2.2e-44 183.7 224 50.4
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 4.4e-40 169.5 230 46.5
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 9.7e-40 168.3 232 47.8
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 3.7e-39 166.4 225 45.3
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 2.4e-38 163.7 234 43.2
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 5.5e-35 152.5 226 46.0
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 2.7e-34 150.2 222 45.0
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 6.8e-33 145.6 267 40.1
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.5e-32 144.4 222 45.5
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 7.5e-32 142.1 235 40.0
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 1.8e-30 137.5 226 40.7
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 4.5e-29 132.9 224 42.4
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.9e-28 130.2 219 40.6
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 6.5e-28 129.0 227 41.4
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 1.1e-27 128.3 223 39.5
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 1.5e-27 127.9 122 59.8
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 2.5e-27 127.1 227 40.5
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.8e-26 123.6 227 38.3
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 8.0e-26 122.1 232 38.4
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 8.0e-26 122.1 234 37.2
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 1.8e-25 120.9 218 36.2
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 3.0e-25 120.2 228 36.4
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 6.8e-25 119.0 222 40.1
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 1.2e-24 118.2 233 36.1
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 2.0e-24 117.5 226 35.8
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 2.6e-24 117.1 226 35.8
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 3.4e-24 116.7 224 36.6
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 2.2e-23 114.0 227 37.0
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 3.7e-23 113.2 241 36.1
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 6.3e-23 112.5 228 39.0
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 6.3e-23 112.5 228 39.0
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 3.5e-21 106.7 231 36.8
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 4.5e-21 106.3 99 56.6
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 5.9e-21 105.9 238 36.6
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.0e-20 105.1 227 35.2
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 1.3e-20 104.8 230 36.1
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 1.7e-20 104.4 143 43.4
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 2.9e-20 103.6 229 34.9
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 8.6e-20 102.1 225 33.3
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 1.9e-19 100.9 108 54.6
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 2.5e-19 100.5 227 34.4
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 5.6e-19 99.4 139 47.5
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 2.8e-18 97.1 83 60.2
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 8.0e-18 95.5 219 34.7
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 1.0e-17 95.1 227 32.6
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 1.4e-17 94.7 240 32.5
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 1.4e-17 94.7 225 34.2
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 1.8e-17 94.4 227 35.2
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 1.8e-17 94.4 228 32.0
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 3.0e-17 93.6 223 35.9
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 6.8e-17 92.4 221 35.3
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 6.8e-17 92.4 231 34.2
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 1.2e-16 91.7 227 34.4
MELO3C030968.2 Cucumis melo HOM05D007214 ORTHO05D008907 1.2e-16 91.7 92 52.2
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 1.2e-16 91.7 213 36.6
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 2.0e-16 90.9 95 53.7
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 7.5e-16 89.0 208 36.1
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 3.7e-15 86.7 224 34.4
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 3.7e-15 86.7 108 39.8
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 6.4e-15 85.9 232 34.9
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 1.4e-14 84.7 225 34.2
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 1.4e-14 84.7 132 40.2
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.6e-13 81.3 221 32.1
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 2.0e-13 80.9 226 32.7
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.3e-12 78.2 267 29.2
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 1.3e-12 78.2 112 45.5
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 2.3e-12 77.4 226 31.9
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 2.3e-12 77.4 70 58.6
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 2.3e-12 77.4 233 31.8
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 6.6e-12 75.9 156 37.2
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 2.5e-11 73.9 183 33.9
Os06g0235900 Oryza sativa ssp. japonica HOM05D007214 ORTHO05D008907 4.3e-11 73.2 104 42.3
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 5.6e-11 72.8 225 29.3
TPR.G39121 Trifolium pratense HOM05D007214 ORTHO05D008907 5.6e-11 72.8 247 30.0
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 2.8e-10 70.5 221 31.7
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 4.7e-10 69.7 228 31.1
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 6.2e-10 69.3 226 31.4
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.4e-09 68.2 210 35.2
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 1.8e-09 67.8 140 38.6
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 8.9e-09 65.5 162 34.0
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 1.2e-08 65.1 227 28.6
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 2.6e-08 63.9 232 27.2
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 3.4e-08 63.5 238 27.3
Rhsim12G0075800 Rhododendron simsii HOM05D000660 ORTHO05D008907 1.7e-07 61.2 112 42.0
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 2.2e-07 60.8 227 25.1
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 1.1e-06 58.5 114 33.3
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 1.4e-06 58.2 85 47.1
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 1.9e-06 57.8 203 29.6
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 1.9e-06 57.8 227 30.0


User provided reference genes

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