Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 1.7e-47 192.2 90 100.0
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 1.5e-43 179.1 89 89.9
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 2.0e-40 168.7 85 88.2
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 7.8e-40 166.8 87 83.9
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 7.8e-40 166.8 87 83.9
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 1.0e-39 166.4 90 83.3
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 1.3e-39 166.0 84 84.5
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 1.7e-39 165.6 85 84.7
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 3.9e-39 164.5 85 84.7
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 8.6e-39 163.3 84 84.5
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 8.6e-39 163.3 84 84.5
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 8.6e-39 163.3 84 84.5
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 8.6e-39 163.3 85 84.7
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 1.1e-38 162.9 88 79.5
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 1.1e-38 162.9 89 79.8
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 1.1e-38 162.9 88 79.5
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 1.1e-38 162.9 85 83.5
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 1.1e-38 162.9 85 83.5
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 1.1e-38 162.9 85 83.5
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 1.5e-38 162.5 83 85.5
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 1.5e-38 162.5 80 88.8
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 1.9e-38 162.2 84 83.3
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 1.9e-38 162.2 85 83.5
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 2.5e-38 161.8 83 81.9
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.5e-38 161.8 83 81.9
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.5e-38 161.8 83 81.9
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.5e-38 161.8 83 81.9
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 2.5e-38 161.8 88 79.5
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 3.3e-38 161.4 84 83.3
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 3.3e-38 161.4 84 82.1
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 3.3e-38 161.4 84 83.3
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 4.3e-38 161.0 85 81.2
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 5.6e-38 160.6 88 79.5
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 5.6e-38 160.6 85 81.2
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 5.6e-38 160.6 85 81.2
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 5.6e-38 160.6 84 84.5
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 7.3e-38 160.2 84 82.1
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 7.3e-38 160.2 84 82.1
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 7.3e-38 160.2 85 81.2
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 7.3e-38 160.2 83 83.1
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 9.5e-38 159.8 88 79.5
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 9.5e-38 159.8 85 81.2
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 9.5e-38 159.8 85 81.2
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 9.5e-38 159.8 85 81.2
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 1.2e-37 159.5 85 81.2
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.2e-37 159.5 85 82.4
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 1.2e-37 159.5 85 80.0
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 1.6e-37 159.1 84 81.0
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 2.8e-37 158.3 84 82.1
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 2.8e-37 158.3 85 80.0
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 3.6e-37 157.9 85 78.8
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 4.7e-37 157.5 84 78.6
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 6.2e-37 157.1 85 80.0
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 6.2e-37 157.1 85 80.0
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 6.2e-37 157.1 84 79.8
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 6.2e-37 157.1 84 81.0
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 6.2e-37 157.1 87 75.9
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 6.2e-37 157.1 83 81.9
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 6.2e-37 157.1 84 79.8
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 8.0e-37 156.8 84 82.1
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 1.1e-36 156.4 85 77.6
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 1.4e-36 156.0 85 78.8
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 1.4e-36 156.0 85 76.5
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 1.8e-36 155.6 85 78.8
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 2.3e-36 155.2 83 79.5
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 2.3e-36 155.2 85 78.8
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 3.1e-36 154.8 85 78.8
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 3.1e-36 154.8 87 77.0
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 3.1e-36 154.8 87 77.0
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 5.2e-36 154.1 85 77.6
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 5.2e-36 154.1 85 77.6
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 6.8e-36 153.7 85 77.6
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 6.8e-36 153.7 85 77.6
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 8.9e-36 153.3 87 75.9
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 8.9e-36 153.3 79 81.0
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 8.9e-36 153.3 87 75.9
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 8.9e-36 153.3 89 76.4
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 1.2e-35 152.9 84 76.2
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 1.2e-35 152.9 85 77.6
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.5e-35 152.5 85 77.6
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 1.5e-35 152.5 85 80.0
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 2.0e-35 152.1 85 76.5
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 2.6e-35 151.8 81 80.2
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 3.4e-35 151.4 85 76.5
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 3.4e-35 151.4 85 76.5
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 3.4e-35 151.4 85 76.5
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 3.4e-35 151.4 85 76.5
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 3.4e-35 151.4 85 76.5
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 4.4e-35 151.0 85 76.5
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 4.4e-35 151.0 85 76.5
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 4.4e-35 151.0 85 76.5
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 4.4e-35 151.0 85 76.5
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 4.4e-35 151.0 84 78.6
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 5.8e-35 150.6 85 80.0
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 7.5e-35 150.2 85 78.8
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 7.5e-35 150.2 83 78.3
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 7.5e-35 150.2 83 78.3
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 1.1e-33 146.4 85 75.3
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 2.4e-33 145.2 81 79.0
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 3.2e-33 144.8 85 74.1
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 7.0e-33 143.7 83 73.5
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 1.2e-32 142.9 88 70.5
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 1.3e-31 139.4 84 72.6
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 3.0e-31 138.3 83 77.1
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 3.9e-31 137.9 80 70.0
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.1e-31 137.5 85 72.9
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 5.1e-31 137.5 69 84.1
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 1.1e-30 136.3 83 69.9
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 1.5e-30 136.0 83 71.1
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 1.5e-30 136.0 83 69.9
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 1.2e-29 132.9 88 64.8
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.2e-29 132.9 88 70.5
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 6.8e-28 127.1 88 65.9
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 1.5e-27 125.9 73 71.2
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 2.6e-27 125.2 84 66.7
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 1.7e-26 122.5 84 66.7
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 8.6e-23 110.2 70 70.0
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 8.6e-23 110.2 70 70.0
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 1.1e-20 103.2 82 51.2
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 2.4e-20 102.1 80 50.0
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 2.4e-17 92.0 53 69.8
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 4.2e-17 91.3 78 50.0
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 8.7e-15 83.6 42 81.0
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 1.1e-14 83.2 78 43.6
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 1.2e-13 79.7 85 40.0
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 1.9e-09 65.9 83 44.6
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 5.4e-09 64.3 41 70.7
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 2.1e-08 62.4 56 53.6
Zm00001eb053260 Zea mays HOM05D005988 ORTHO05D007392 3.3e-06 55.1 36 66.7
Zm00001eb053240 Zea mays HOM05D005988 ORTHO05D007392 5.6e-06 54.3 36 63.9


User provided reference genes

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