Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 1.8e-174 615.9 337 100.0
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 4.7e-98 362.1 275 70.5
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 6.4e-95 351.7 253 74.7
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 5.4e-94 348.6 310 64.8
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 1.2e-93 347.4 246 74.4
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 2.1e-93 346.7 252 72.2
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 4.6e-93 345.5 326 60.4
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 4.6e-93 345.5 288 65.3
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 7.8e-93 344.7 266 68.8
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 1.7e-92 343.6 249 71.9
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 5.1e-92 342.0 249 71.5
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 6.6e-92 341.7 238 80.7
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 1.1e-91 340.9 317 60.9
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 1.9e-91 340.1 301 62.5
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 3.3e-91 339.3 344 57.6
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 9.5e-91 337.8 309 60.5
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 2.8e-90 336.3 237 72.6
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 3.6e-90 335.9 235 77.0
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 1.2e-88 330.9 237 71.3
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 1.5e-88 330.5 337 58.8
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.5e-88 330.5 316 59.5
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 1.5e-88 330.5 326 56.4
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 1.7e-87 327.0 300 59.7
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 1.7e-87 327.0 237 78.1
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 2.2e-87 326.6 325 59.1
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 3.7e-87 325.9 323 57.9
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 6.4e-87 325.1 320 57.8
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 8.4e-87 324.7 279 63.4
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 8.4e-87 324.7 232 71.6
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 8.4e-87 324.7 304 59.9
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 1.1e-86 324.3 327 56.6
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 1.1e-86 324.3 337 57.0
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 1.1e-86 324.3 337 54.6
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 1.9e-86 323.6 336 58.0
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 2.4e-86 323.2 230 73.0
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 5.4e-86 322.0 240 69.2
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 9.2e-86 321.2 338 56.8
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 1.6e-85 320.5 252 68.7
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 2.1e-85 320.1 306 59.8
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 2.1e-85 320.1 256 65.6
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 2.7e-85 319.7 344 57.6
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 2.7e-85 319.7 279 62.7
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 3.5e-85 319.3 330 57.0
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 1.0e-84 317.8 237 70.9
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 2.3e-84 316.6 262 66.0
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 3.0e-84 316.2 265 63.0
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 3.0e-84 316.2 272 62.9
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 3.0e-84 316.2 237 76.8
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 3.9e-84 315.8 325 56.9
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 8.6e-84 314.7 271 63.5
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 3.3e-83 312.8 325 56.9
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 5.6e-83 312.0 311 57.6
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 5.6e-83 312.0 287 59.9
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 5.6e-83 312.0 238 76.1
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 5.6e-83 312.0 340 55.6
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 7.3e-83 311.6 253 66.0
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 9.6e-83 311.2 257 65.4
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 9.6e-83 311.2 271 64.2
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 9.6e-83 311.2 335 53.7
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 1.2e-82 310.8 245 67.8
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 1.6e-82 310.5 343 53.1
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 2.8e-82 309.7 257 65.0
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 3.6e-82 309.3 287 59.6
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 3.6e-82 309.3 313 56.5
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 3.6e-82 309.3 287 61.0
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 3.6e-82 309.3 337 53.4
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 6.2e-82 308.5 329 53.2
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 8.1e-82 308.1 343 53.9
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 1.4e-81 307.4 287 62.4
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 1.4e-81 307.4 202 76.7
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 1.4e-81 307.4 329 59.0
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 1.8e-81 307.0 285 58.9
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 6.8e-81 305.1 308 55.2
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 2.0e-80 303.5 209 73.2
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 2.0e-80 303.5 248 64.5
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 3.4e-80 302.8 197 75.6
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 4.4e-80 302.4 334 56.9
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 4.4e-80 302.4 234 65.4
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 7.6e-80 301.6 288 57.6
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 2.2e-79 300.1 199 76.4
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 2.2e-79 300.1 231 67.5
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 3.8e-79 299.3 233 67.0
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 4.9e-79 298.9 287 57.1
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 1.1e-78 297.7 289 57.1
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 3.2e-78 296.2 234 65.8
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 5.4e-78 295.4 233 66.1
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 5.4e-78 295.4 233 66.1
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 5.4e-78 295.4 312 56.1
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 9.3e-78 294.7 289 56.4
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 9.3e-78 294.7 198 74.7
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 1.2e-77 294.3 199 73.9
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 2.7e-77 293.1 300 59.3
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 1.0e-76 291.2 235 67.7
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 1.7e-76 290.4 233 65.2
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 1.7e-76 290.4 248 62.9
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 1.7e-76 290.4 233 65.2
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 3.0e-76 289.7 248 62.5
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 5.1e-76 288.9 242 63.6
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 6.6e-76 288.5 209 72.2
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 3.3e-75 286.2 197 74.6
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 2.6e-72 276.6 254 59.4
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 5.8e-72 275.4 199 70.4
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 2.4e-70 270.0 270 53.7
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 9.0e-65 251.5 199 67.8
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 2.0e-64 250.4 226 56.6
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 2.1e-61 240.4 247 51.4
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 3.5e-61 239.6 195 61.0
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 5.6e-59 232.3 232 51.7
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 1.2e-56 224.6 203 55.7
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 6.5e-55 218.8 292 46.9
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 1.8e-52 210.7 219 51.1
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 2.0e-48 197.2 150 65.3
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 1.4e-33 147.9 180 58.9
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 1.4e-28 131.3 123 56.9
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 1.5e-27 127.9 110 60.0
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 3.7e-26 123.2 178 41.6
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 1.5e-19 101.3 66 78.8
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 4.4e-19 99.8 64 81.2
Zm00001eb151370 Zea mays HOM05D006025 ORTHO05D443914 1.2e-08 65.1 52 65.4


User provided reference genes

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