Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 0.0e+00 1440.2 751 100.0
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 5.1e-177 625.5 982 44.0
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 1.1e-160 571.2 1079 39.3
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 9.0e-158 561.6 795 47.5
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 2.9e-156 556.6 889 43.2
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 3.2e-155 553.1 1080 38.5
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 3.2e-155 553.1 852 43.0
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 7.4e-152 542.0 799 46.9
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 2.4e-150 537.0 820 44.5
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 5.3e-150 535.8 833 43.8
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 2.6e-149 533.5 835 44.6
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 2.9e-148 530.0 880 43.1
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 5.0e-148 529.3 809 45.2
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 1.9e-147 527.3 882 43.1
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 1.9e-147 527.3 412 68.7
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 7.2e-147 525.4 838 43.1
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 2.7e-146 523.5 837 44.0
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 4.7e-146 522.7 776 45.0
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 3.0e-145 520.0 878 42.5
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 3.0e-145 520.0 805 44.8
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 2.0e-144 517.3 408 68.4
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 2.6e-144 516.9 812 43.6
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 5.7e-144 515.8 860 40.1
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 7.4e-144 515.4 764 45.9
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 1.4e-142 511.1 767 45.4
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 1.8e-142 510.8 866 42.5
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 2.4e-142 510.4 816 43.0
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 4.1e-142 509.6 931 39.7
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 4.1e-142 509.6 793 45.0
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 5.3e-142 509.2 798 45.7
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 7.0e-142 508.8 412 66.0
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.6e-141 507.7 783 45.6
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 1.6e-141 507.7 937 40.8
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 2.0e-141 507.3 773 45.1
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 1.0e-140 505.0 728 47.7
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 1.3e-140 504.6 762 44.2
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 1.7e-140 504.2 837 42.8
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 8.5e-140 501.9 403 67.5
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 1.5e-139 501.1 828 43.4
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 2.5e-139 500.4 760 45.4
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 3.2e-139 500.0 762 44.5
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 1.2e-138 498.0 751 44.5
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 2.7e-138 496.9 929 39.0
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 5.2e-137 492.7 412 64.8
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 5.2e-137 492.7 760 45.3
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 8.8e-137 491.9 816 42.9
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 3.3e-136 490.0 831 43.3
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 7.5e-136 488.8 410 63.2
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 1.7e-135 487.6 412 63.3
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 3.7e-135 486.5 732 46.2
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 4.8e-135 486.1 416 64.2
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 1.1e-134 485.0 792 41.9
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 7.7e-133 478.8 755 43.3
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 2.9e-132 476.9 785 43.4
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 1.9e-131 474.2 472 58.1
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 1.9e-131 474.2 409 63.3
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 1.2e-130 471.5 927 38.7
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 2.1e-130 470.7 408 62.0
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 2.7e-130 470.3 856 41.6
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 1.4e-129 468.0 930 38.5
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.3e-129 467.2 937 38.4
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 1.5e-128 464.5 993 37.7
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 2.0e-128 464.2 922 39.5
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 9.8e-128 461.8 799 41.6
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 1.3e-127 461.5 849 40.9
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 2.8e-127 460.3 871 40.5
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 6.3e-127 459.1 415 61.9
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 1.8e-126 457.6 808 40.2
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 1.8e-126 457.6 911 38.0
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 7.0e-126 455.7 413 59.1
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 1.2e-125 454.9 708 44.4
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 1.6e-125 454.5 780 41.9
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 2.0e-125 454.1 456 57.7
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 4.5e-125 453.0 907 39.1
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 5.9e-125 452.6 773 41.1
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 1.7e-124 451.1 770 41.3
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 1.1e-123 448.4 837 39.4
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.5e-123 447.2 793 43.3
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 3.2e-123 446.8 925 38.1
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 1.0e-121 441.8 411 58.9
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 1.4e-121 441.4 784 41.2
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 1.8e-121 441.0 778 40.9
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 2.0e-120 437.6 914 37.6
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 7.5e-120 435.6 934 36.5
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 1.7e-119 434.5 411 59.9
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 8.3e-119 432.2 796 39.4
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 1.8e-118 431.0 417 60.0
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 9.2e-118 428.7 737 42.2
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 1.6e-117 427.9 776 41.0
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 2.7e-117 427.2 410 57.8
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 2.3e-116 424.1 397 59.2
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 1.5e-115 421.4 779 42.2
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 1.9e-115 421.0 434 56.0
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 6.8e-113 412.5 759 41.0
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 6.4e-111 406.0 424 55.2
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 4.1e-110 403.3 418 55.3
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 2.1e-106 391.0 812 37.8
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 4.0e-105 386.7 868 36.2
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 7.0e-102 375.9 419 52.0
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 4.0e-97 360.1 243 72.0
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 1.1e-89 335.5 198 81.3
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 4.0e-89 333.6 818 34.1
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 2.0e-80 304.7 468 43.2
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 1.8e-68 265.0 301 54.5
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 1.1e-67 262.3 624 35.7
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 2.5e-46 191.4 560 33.0
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 2.7e-37 161.4 201 41.3
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.5e-32 145.6 203 44.8
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 1.0e-31 142.9 111 63.1
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 1.8e-25 122.1 111 57.7
Dinv19922 Davidia involucrata HOM05D006304 ORTHO05D008584 1.3e-15 89.4 92 52.2
QL10p015689 Quercus lobata HOM05D006304 ORTHO05D008584 5.0e-15 87.4 86 59.3
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 1.9e-14 85.5 89 56.2
CSS0027880 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 8.6e-07 60.1 136 35.3
Duzib084G1176 Durio zibethinus HOM05D006304 ORTHO05D008584 8.6e-07 60.1 73 53.4


User provided reference genes

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