Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00735 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 1.1e-165 586.6 315 100.0
Aqoxy7G00284 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 3.8e-134 481.9 315 81.0
TAR626G1135 Trochodendron aralioides HOM05D005557 ORTHO05D006748 1.3e-105 387.1 313 68.4
QL11p001232 Quercus lobata HOM05D005557 ORTHO05D006748 2.3e-99 366.3 325 62.5
Ciclev10009013m.g Citrus clementina HOM05D005557 ORTHO05D006748 8.9e-99 364.4 316 62.3
CANSAT56G2230 Cannabis sativa HOM05D005557 ORTHO05D006748 2.6e-98 362.8 319 67.4
Manes.03G042000 Manihot esculenta HOM05D005557 ORTHO05D006748 3.4e-98 362.5 324 59.9
Thecc.08G180200 Theobroma cacao HOM05D005557 ORTHO05D006748 3.4e-98 362.5 318 61.6
Gohir.A06G078200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 7.5e-98 361.3 311 62.7
GSVIVG01015048001 Vitis vinifera HOM05D005557 ORTHO05D006748 2.9e-97 359.4 216 78.7
CiPaw.03G203700 Carya illinoinensis HOM05D005557 ORTHO05D006748 8.3e-97 357.8 322 60.9
Dinv25539 Davidia involucrata HOM05D005557 ORTHO05D006748 1.4e-96 357.1 322 61.5
Hma1.2p1_0169F.1_g074410 Hydrangea macrophylla HOM05D005557 ORTHO05D006748 4.1e-96 355.5 231 76.2
Gorai.010G090300 Gossypium raimondii HOM05D005557 ORTHO05D006748 5.4e-96 355.1 318 60.7
PSO386G0114 Papaver somniferum HOM05D005557 ORTHO05D006748 1.6e-95 353.6 250 70.4
Atru.chr7.1734 Acer truncatum HOM05D005557 ORTHO05D006748 2.0e-95 353.2 310 59.7
Dinv42413 Davidia involucrata HOM05D005557 ORTHO05D006748 3.5e-95 352.4 317 60.9
TWI32G1325 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 3.5e-95 352.4 312 60.3
Cfa002966 Carpinus fangiana HOM05D000173 ORTHO05D006748 1.3e-94 350.5 315 61.6
Potri.006G139800 Populus trichocarpa HOM05D005557 ORTHO05D006748 1.7e-94 350.1 321 57.6
MD02G1257100 Malus domestica HOM05D005557 ORTHO05D006748 2.3e-94 349.7 222 76.6
CSS0017494 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 3.9e-94 349.0 238 72.7
FvH4_7g05500 Fragaria vesca HOM05D005557 ORTHO05D006748 1.5e-93 347.1 248 70.6
Lj7A689T78 Lonicera japonica HOM05D005557 ORTHO05D006748 2.5e-93 346.3 313 60.1
MD07G1063400 Malus domestica HOM05D005557 ORTHO05D006748 4.3e-93 345.5 225 75.6
FAN01G0749 Fragaria x ananassa HOM05D005557 ORTHO05D006748 5.6e-93 345.1 248 70.2
FAN10G4084 Fragaria x ananassa HOM05D005557 ORTHO05D006748 5.6e-93 345.1 248 70.2
RcHm_v2.0_Chr1g0332351 Rosa chinensis HOM05D005557 ORTHO05D006748 5.6e-93 345.1 252 69.8
Duzib168G0027 Durio zibethinus HOM05D005557 ORTHO05D006748 7.3e-93 344.7 317 62.1
TWI63G1120 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 1.2e-92 344.0 318 58.2
FAN03G2003 Fragaria x ananassa HOM05D005557 ORTHO05D006748 2.1e-92 343.2 248 69.8
Cc06_g12460 Coffea canephora HOM05D005557 ORTHO05D006748 3.6e-92 342.4 236 69.5
Prupe.2G075400 Prunus persica HOM05D005557 ORTHO05D006748 6.2e-92 341.7 222 74.8
PGR142G2674 Punica granatum HOM05D005557 ORTHO05D006748 6.2e-92 341.7 313 57.5
COL.COLO4_18069 Corchorus olitorius HOM05D005557 ORTHO05D006748 8.1e-92 341.3 198 81.3
Actinidia30238 Actinidia chinensis HOM05D005557 ORTHO05D006748 1.1e-91 340.9 318 57.9
ClCG03G014930 Citrullus lanatus HOM05D005557 ORTHO05D006748 1.8e-91 340.1 311 59.2
Cpa.g.sc28.12 Carica papaya HOM05D005557 ORTHO05D006748 2.3e-91 339.7 311 56.6
Sabra06G0109200 Salix brachista HOM05D005557 ORTHO05D006748 5.2e-91 338.6 248 65.3
BolC5t30454H Brassica oleracea HOM05D005557 ORTHO05D006748 6.8e-91 338.2 312 55.8
THA.LOC104815688 Tarenaya hassleriana HOM05D005557 ORTHO05D006748 2.0e-90 336.7 315 57.5
Solyc07g042150.3 Solanum lycopersicum HOM05D005557 ORTHO05D006748 2.6e-90 336.3 317 56.8
Thhalv10008278m.g Eutrema salsugineum HOM05D005557 ORTHO05D006748 4.4e-90 335.5 313 56.2
Aa31LG7G3880 Aethionema arabicum HOM05D005557 ORTHO05D006748 9.9e-90 334.3 311 55.9
A06p15270 Brassica napus HOM05D005557 ORTHO05D006748 1.3e-89 334.0 314 56.1
BraA06t24641Z Brassica rapa HOM05D005557 ORTHO05D006748 1.3e-89 334.0 314 56.1
vmacro17121 Vaccinium macrocarpon HOM05D000173 ORTHO05D006748 1.3e-89 334.0 337 55.2
arahy.Tifrunner.gnm1.ann1.568RE3 Arachis hypogaea HOM05D005557 ORTHO05D006748 1.7e-89 333.6 219 72.6
AT1G19140 Arabidopsis thaliana HOM05D005557 ORTHO05D006748 2.2e-89 333.2 312 57.7
Migut.J00918 Erythranthe guttata HOM05D005557 ORTHO05D006748 2.2e-89 333.2 237 69.6
Sp1g17050 Schrenkiella parvula HOM05D005557 ORTHO05D006748 2.2e-89 333.2 319 55.8
PGSC0003DMG400016040 Solanum tuberosum HOM05D005557 ORTHO05D006748 2.2e-89 333.2 319 55.5
Nitab4.5_0000343g0390 Nicotiana tabacum HOM05D005557 ORTHO05D006748 2.9e-89 332.8 241 67.2
DCAR_024765 Daucus carota HOM05D005557 ORTHO05D006748 3.7e-89 332.4 240 67.1
arahy.Tifrunner.gnm1.ann1.C56SYK Arachis hypogaea HOM05D005557 ORTHO05D006748 8.3e-89 331.3 319 56.7
Lj4g0021187 Lotus japonicus HOM05D005557 ORTHO05D006748 8.3e-89 331.3 217 72.8
BcaB07g31927 Brassica carinata HOM05D005557 ORTHO05D006748 1.1e-88 330.9 312 55.8
CARHR019740 Cardamine hirsuta HOM05D005557 ORTHO05D006748 1.1e-88 330.9 318 56.0
AL1G31720 Arabidopsis lyrata HOM05D005557 ORTHO05D006748 1.4e-88 330.5 318 55.3
MSTRG.10500 Avicennia marina HOM05D005557 ORTHO05D006748 1.4e-88 330.5 237 67.5
SalBow6G3747 Salvia bowleyana HOM05D005557 ORTHO05D006748 1.4e-88 330.5 258 64.0
Sopen07g021740 Solanum pennellii HOM05D005557 ORTHO05D006748 1.4e-88 330.5 315 56.2
CsaV3_1G041220 Cucumis sativus L. HOM05D005557 ORTHO05D006748 1.9e-88 330.1 313 57.8
Lalb_Chr13g0299361 Lupinus albus HOM05D005557 ORTHO05D006748 2.4e-88 329.7 313 56.9
Sed0003389 Sechium edule HOM05D005557 ORTHO05D006748 3.2e-88 329.3 214 73.4
BcaC07g38981 Brassica carinata HOM05D005557 ORTHO05D006748 7.1e-88 328.2 312 56.1
C05p17510 Brassica napus HOM05D005557 ORTHO05D006748 1.2e-87 327.4 313 54.6
Gohir.D06G077200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 1.2e-87 327.4 291 60.5
BcaC05g25811 Brassica carinata HOM05D005557 ORTHO05D006748 1.6e-87 327.0 309 54.4
Peaxi162Scf00880g00018 Petunia axillaris HOM05D005557 ORTHO05D006748 3.5e-87 325.9 253 64.0
Nitab4.5_0008784g0050 Nicotiana tabacum HOM05D005557 ORTHO05D006748 4.6e-87 325.5 316 55.1
A08p29990 Brassica napus HOM05D005557 ORTHO05D006748 1.0e-86 324.3 313 55.6
Eucgr.C00788 Eucalyptus grandis HOM05D005557 ORTHO05D006748 1.0e-86 324.3 212 70.8
Os03g0405100 Oryza sativa ssp. japonica HOM05D005557 ORTHO05D006748 2.3e-86 323.2 213 71.4
AUR62028302 Chenopodium quinoa HOM05D005557 ORTHO05D006748 3.9e-86 322.4 311 57.2
CANSAT56G3371 Cannabis sativa HOM05D005557 ORTHO05D006748 5.1e-86 322.0 326 62.6
Ca_09310_v3 Cicer arietinum L. HOM05D005557 ORTHO05D006748 5.1e-86 322.0 317 55.2
Duzib187G0437 Durio zibethinus HOM05D005557 ORTHO05D006748 5.1e-86 322.0 314 57.0
Glyma.17G048000 Glycine max HOM05D005557 ORTHO05D006748 6.6e-86 321.6 209 70.3
BolC8t49542H Brassica oleracea HOM05D005557 ORTHO05D006748 1.1e-85 320.9 212 70.8
FAN10G0153 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.1e-85 320.9 248 66.9
HPP92_013279 Vanilla planifolia HOM05D005557 ORTHO05D006748 1.5e-85 320.5 215 68.8
EL10Ac8g19008 Beta vulgaris HOM05D005557 ORTHO05D006748 1.9e-85 320.1 225 68.4
C08p19230 Brassica napus HOM05D005557 ORTHO05D006748 1.9e-85 320.1 212 70.8
BraA08t34934Z Brassica rapa HOM05D005557 ORTHO05D006748 3.3e-85 319.3 225 68.0
CSS0008332 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 3.3e-85 319.3 238 68.5
Carub.0001s1877 Capsella rubella HOM05D005557 ORTHO05D006748 3.3e-85 319.3 225 69.8
Phvul.003G129500 Phaseolus vulgaris HOM05D005557 ORTHO05D006748 3.3e-85 319.3 208 71.6
BcaB03g12934 Brassica carinata HOM05D005557 ORTHO05D006748 4.3e-85 318.9 221 68.8
SGA_v2.0_scaffold31G12665 Striga asiatica HOM05D005557 ORTHO05D006748 7.3e-85 318.2 255 63.5
MELO3C015535.2 Cucumis melo HOM05D005557 ORTHO05D006748 9.5e-85 317.8 333 53.5
Lalb_Chr07g0181281 Lupinus albus HOM05D005557 ORTHO05D006748 3.6e-84 315.8 311 55.9
VMungo1215G1068 Vigna mungo HOM05D005557 ORTHO05D006748 3.6e-84 315.8 316 53.8
Glyma.13G111700 Glycine max HOM05D005557 ORTHO05D006748 6.2e-84 315.1 311 54.3
Medtr4g125000 Medicago truncatula HOM05D005557 ORTHO05D006748 6.2e-84 315.1 315 54.6
SGA_v2.0_scaffold296G47553 Striga asiatica HOM05D005557 ORTHO05D006748 6.2e-84 315.1 334 53.3
CAN.G32.9 Capsicum annuum HOM05D005557 ORTHO05D006748 1.1e-83 314.3 242 63.2
ECA234G3626 Erigeron canadensis HOM05D005557 ORTHO05D006748 2.4e-83 313.2 234 65.4
Zm00001eb019520 Zea mays HOM05D005557 ORTHO05D006748 4.0e-83 312.4 209 70.3
Rhsim05G0005000 Rhododendron simsii HOM05D000173 ORTHO05D006748 6.8e-83 311.6 207 72.5
Actinidia39641 Actinidia chinensis HOM05D005557 ORTHO05D006748 1.2e-82 310.8 309 56.3
TAR624G0952 Trochodendron aralioides HOM05D005557 ORTHO05D006748 1.2e-82 310.8 273 60.4
CDE05G0257 Ceratophyllum demersum HOM05D005557 ORTHO05D006748 2.6e-82 309.7 237 62.4
Lsat_1_v5_gn_5_139800 Lactuca sativa HOM05D005557 ORTHO05D006748 3.4e-82 309.3 230 65.2
Sc18g0002770 Simmondsia chinensis HOM05D005557 ORTHO05D006748 5.8e-82 308.5 295 58.3
SEGI_32471 Sequoiadendron giganteum HOM05D005557 ORTHO05D006748 3.8e-81 305.8 248 58.9
HanXRQChr12g0354431 Helianthus annuus HOM05D005557 ORTHO05D006748 1.4e-80 303.9 210 70.0
Hund26090 Selenicereus undatus HOM05D005557 ORTHO05D006748 6.2e-76 288.5 194 68.0
TPR.G12564 Trifolium pratense HOM05D005557 ORTHO05D006748 2.6e-74 283.1 290 54.5
BcaB03g12932 Brassica carinata HOM05D005557 ORTHO05D006748 1.9e-72 276.9 230 62.6
unitig_85.g27246 Utricularia gibba HOM05D005557 ORTHO05D006748 2.1e-71 273.5 255 54.1
Pp3c26_10620 Physcomitrium patens HOM05D005557 ORTHO05D006748 1.1e-69 267.7 216 58.8
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 1.7e-65 253.8 203 61.6
ATR1100G017 Amborella trichopoda HOM05D005557 ORTHO05D006748 5.4e-64 248.8 184 66.3
Mapoly0016s0081 Marchantia polymorpha HOM05D005557 ORTHO05D006748 2.1e-63 246.9 236 51.3
Psat7g057840 Pisum sativum HOM05D005557 ORTHO05D006748 4.6e-63 245.7 163 71.2
Thecc.09G074000 Theobroma cacao HOM05D005557 ORTHO05D006748 1.8e-62 243.8 338 46.2
SMO364G0522 Selaginella moellendorffii HOM05D005557 ORTHO05D006748 1.6e-60 237.3 234 50.9
Haze_26037 Corylus avellana HOM05D000173 ORTHO05D000316 2.0e-58 230.3 191 62.8
AagrBONN_evm.TU.Sc2ySwM_228.5739 Anthoceros agrestis HOM05D005557 ORTHO05D006748 1.4e-48 197.6 184 53.8
PSO724G0807 Papaver somniferum HOM05D005557 ORTHO05D006748 4.5e-42 176.0 265 43.0
CBR_g19881 Chara braunii HOM05D005557 ORTHO05D006748 2.2e-41 173.7 161 52.2
SHI52085 Sapria himalayana HOM05D005557 ORTHO05D006748 3.8e-41 172.9 144 58.3
AUR62025296 Chenopodium quinoa HOM05D005557 ORTHO05D006748 1.4e-40 171.0 109 70.6
arahy.Tifrunner.gnm1.ann1.CV9S7K Arachis hypogaea HOM05D005557 ORTHO05D006748 4.2e-32 142.9 83 77.1
arahy.Tifrunner.gnm1.ann1.56M64E Arachis hypogaea HOM05D005557 ORTHO05D006748 5.5e-32 142.5 83 77.1
arahy.Tifrunner.gnm1.ann1.D619LQ Arachis hypogaea HOM05D005557 ORTHO05D006748 5.5e-32 142.5 133 57.9
PRCOL_00004586 Prasinoderma coloniale HOM05D005557 ORTHO05D006748 7.2e-32 142.1 202 38.6
AagrBONN_evm.TU.Sc2ySwM_228.4614 Anthoceros agrestis HOM05D005557 ORTHO05D006748 9.7e-29 131.7 125 51.2
arahy.Tifrunner.gnm1.ann1.WCQ4SR Arachis hypogaea HOM05D005557 ORTHO05D006748 5.3e-27 125.9 117 55.6
Cre06.g269550 Chlamydomonas reinhardtii HOM05D005557 ORTHO05D006748 2.0e-26 124.0 150 41.3
arahy.Tifrunner.gnm1.ann1.67TMSF Arachis hypogaea HOM05D005557 ORTHO05D006748 2.9e-25 120.2 68 76.5
MCO02G393 Micromonas commoda HOM05D005557 ORTHO05D006748 3.2e-24 116.7 198 33.8
Nn1g06537 Nelumbo nucifera HOM05D005557 ORTHO05D006748 2.1e-23 114.0 154 50.0
arahy.Tifrunner.gnm1.ann1.L7J4LP Arachis hypogaea HOM05D005557 ORTHO05D006748 1.6e-15 87.8 57 68.4
Migut.J00920 Erythranthe guttata HOM05D005557 ORTHO05D006748 1.2e-13 81.6 78 56.4
MBI13_g00695_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 1.4e-11 74.7 162 35.2
arahy.Tifrunner.gnm1.ann1.HVCV5S Arachis hypogaea HOM05D004618 ORTHO05D005318 1.2e-10 71.6 83 47.0
Migut.J00958 Erythranthe guttata HOM05D005557 ORTHO05D006748 6.5e-09 65.9 70 55.7
arahy.Tifrunner.gnm1.ann1.B62L7G Arachis hypogaea HOM05D000992 ORTHO05D001928 3.2e-08 63.5 45 66.7
C09p50170 Brassica napus HOM05D002376 ORTHO05D004654 1.0e-06 58.5 37 70.3
Lj2g0003057 Lotus japonicus HOM05D005557 ORTHO05D018814 3.0e-06 57.0 47 55.3
arahy.Tifrunner.gnm1.ann1.KDZ9D9 Arachis hypogaea HOM05D005557 ORTHO05D001928 4.0e-06 56.6 28 82.1


User provided reference genes

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