Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00698 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 0.0e+00 1728.0 858 100.0
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 0.0e+00 1105.1 1119 56.4
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 4.8e-187 659.1 1160 38.4
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 1.5e-148 531.2 1175 33.6
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 9.4e-143 511.9 1167 32.6
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 2.2e-139 500.7 1174 32.1
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 6.3e-139 499.2 1176 32.5
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 1.5e-124 451.4 1120 31.2
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 7.5e-124 449.1 1148 29.4
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 1.7e-120 438.0 1164 30.4
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 1.0e-117 428.7 1161 29.6
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 6.8e-117 426.0 598 42.8
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 2.6e-116 424.1 1150 28.6
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 3.7e-115 420.2 1165 29.5
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 1.1e-114 418.7 596 42.4
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 5.8e-108 396.4 1180 28.3
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 9.8e-108 395.6 952 31.7
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 1.8e-106 391.3 613 38.7
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.8e-106 391.3 600 39.7
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 1.6e-105 388.3 625 37.6
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 2.0e-105 387.9 1234 28.1
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 7.8e-105 386.0 630 38.4
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 1.7e-104 384.8 626 38.7
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 2.3e-101 374.4 614 38.1
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 2.0e-100 371.3 1168 27.9
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 2.0e-100 371.3 1173 27.3
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 2.0e-100 371.3 599 39.7
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 4.9e-99 366.7 598 37.0
ATR0661G443 Amborella trichopoda HOM05D002759 ORTHO05D003290 6.4e-99 366.3 621 38.5
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 1.1e-98 365.5 1125 26.9
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 1.9e-98 364.8 620 35.0
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 4.1e-98 363.6 1146 27.8
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 2.7e-97 360.9 598 36.6
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 4.6e-97 360.1 593 38.3
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 6.0e-97 359.8 598 36.6
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 1.0e-96 359.0 593 36.9
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 1.3e-96 358.6 593 36.9
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 1.3e-96 358.6 1035 28.2
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 1.3e-96 358.6 616 36.4
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 1.1e-95 355.5 1103 27.8
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 1.5e-95 355.1 593 37.4
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 2.5e-95 354.4 595 37.6
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 4.3e-95 353.6 1145 27.3
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 7.3e-95 352.8 593 36.8
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 7.3e-95 352.8 737 34.3
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 9.5e-95 352.4 593 37.1
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 2.8e-94 350.9 593 37.1
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 3.6e-94 350.5 592 36.5
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 4.7e-94 350.1 1156 26.9
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 1.8e-93 348.2 608 37.8
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 2.3e-93 347.8 631 35.5
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 8.9e-93 345.9 592 36.7
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 1.2e-92 345.5 622 35.5
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 1.2e-92 345.5 591 36.5
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 1.5e-92 345.1 1122 27.7
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 1.5e-92 345.1 1131 25.9
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 1.5e-92 345.1 641 35.7
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 2.6e-92 344.4 613 35.7
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 2.6e-92 344.4 610 35.7
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 4.4e-92 343.6 622 35.4
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 1.7e-91 341.7 1132 27.2
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 3.7e-91 340.5 1129 26.9
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 3.7e-91 340.5 1129 26.9
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 4.9e-91 340.1 590 35.9
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 2.4e-90 337.8 621 33.3
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 4.1e-90 337.0 613 35.2
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 5.4e-90 336.7 1146 26.6
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 5.4e-90 336.7 1162 26.6
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 7.1e-90 336.3 1122 27.3
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 1.6e-89 335.1 597 37.4
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 2.1e-89 334.7 621 34.8
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 2.1e-89 334.7 664 34.6
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 2.7e-89 334.3 1113 26.1
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 2.7e-89 334.3 1170 26.7
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 2.7e-89 334.3 594 36.5
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 2.7e-89 334.3 617 36.0
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 1.0e-88 332.4 632 34.5
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 5.1e-88 330.1 1145 26.7
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 1.1e-87 328.9 625 34.9
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 4.3e-87 327.0 589 35.1
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 5.6e-87 326.6 589 35.1
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 5.6e-87 326.6 1105 27.2
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 4.7e-86 323.6 671 34.0
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 4.7e-86 323.6 630 33.7
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 8.1e-86 322.8 608 34.9
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 8.1e-86 322.8 596 34.4
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 4.9e-83 313.5 628 34.7
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 1.9e-82 311.6 571 34.9
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 9.2e-82 309.3 622 33.1
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 6.6e-80 303.1 653 32.9
BcaB05g23798 Brassica carinata HOM05D002759 ORTHO05D003290 7.3e-79 299.7 626 33.9
RcHm_v2.0_Chr7g0177921 Rosa chinensis HOM05D002759 ORTHO05D003290 1.4e-77 295.4 801 30.6
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 1.8e-77 295.0 580 35.0
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 3.4e-76 290.8 1148 25.6
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 8.4e-75 286.2 599 33.9
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 1.2e-73 282.3 626 31.2
Ah.07g205390 Amaranthus hybridus HOM05D002759 ORTHO05D003290 1.9e-71 275.0 629 32.1
Hund21015 Selenicereus undatus HOM05D002759 ORTHO05D003290 9.0e-69 266.2 474 36.7
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 1.9e-66 258.5 1052 24.4
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 1.2e-65 255.8 624 31.1
SEGI_09272 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 5.1e-64 250.4 611 30.9
Cpa.g.sc148.31 Carica papaya HOM05D002759 ORTHO05D003290 2.8e-62 244.6 519 33.1
C04p07370 Brassica napus HOM05D002759 ORTHO05D003290 1.5e-60 238.8 588 31.6
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 7.6e-60 236.5 1047 26.5
BcaC02g11623 Brassica carinata HOM05D002759 ORTHO05D003290 9.3e-58 229.6 616 30.8
BolC4t22942H Brassica oleracea HOM05D002759 ORTHO05D003290 9.3e-58 229.6 611 30.9
FAN08G3490 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.6e-54 218.8 597 29.5
C04p13030 Brassica napus HOM05D002759 ORTHO05D003290 9.0e-53 213.0 602 29.7
HPP92_009112 Vanilla planifolia HOM05D002759 ORTHO05D003290 6.5e-51 206.8 887 25.5
BcaB02g09105 Brassica carinata HOM05D002759 ORTHO05D003290 4.6e-49 200.7 634 28.7
MD08G1226100 Malus domestica HOM05D002759 ORTHO05D003290 4.3e-39 167.5 362 32.0
AagrBONN_evm.TU.Sc2ySwM_117.1581 Anthoceros agrestis HOM05D002759 ORTHO05D003290 4.1e-37 161.0 681 24.4
Pp3c8_2900 Physcomitrium patens HOM05D002759 ORTHO05D003290 3.8e-35 154.5 645 24.0
unitig_26.g9018 Utricularia gibba HOM05D002759 ORTHO05D003290 3.3e-31 141.4 915 23.2
Cpa.g.sc148.29 Carica papaya HOM05D002759 ORTHO05D003290 1.0e-27 129.8 224 35.3
CARHR230010 Cardamine hirsuta HOM05D002759 ORTHO05D003290 3.8e-27 127.9 221 35.3
Gohir.A01G176601 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.1e-23 116.3 210 36.2
SHI26607 Sapria himalayana HOM05D002759 ORTHO05D003290 1.7e-22 112.5 267 31.8
Mapoly0118s0005 Marchantia polymorpha HOM05D002759 ORTHO05D003290 1.4e-21 109.4 611 22.6
SMO356G0583 Selaginella moellendorffii HOM05D002759 ORTHO05D003290 5.3e-21 107.5 570 22.3
CDE09G0711 Ceratophyllum demersum HOM05D002759 ORTHO05D003290 3.8e-19 101.3 281 28.8
CARHR290780 Cardamine hirsuta HOM05D002759 ORTHO05D003290 1.1e-18 99.8 224 32.1
Oeu043988.1 Olea europaea HOM05D002759 ORTHO05D003290 1.5e-18 99.4 205 31.7
BolC4t22359H Brassica oleracea HOM05D002759 ORTHO05D003290 4.2e-18 97.8 236 32.2
AL7G28920 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 5.5e-18 97.4 209 32.1
CARHR284390 Cardamine hirsuta HOM05D002759 ORTHO05D003290 2.7e-17 95.1 149 37.6
Gohir.D01G167432 Gossypium hirsutum HOM05D002759 ORTHO05D003290 4.7e-17 94.4 186 37.1
arahy.Tifrunner.gnm1.ann1.HX0PY9 Arachis hypogaea HOM05D002759 ORTHO05D003290 2.3e-16 92.0 190 33.7
FvH4_5g29932 Fragaria vesca HOM05D002759 ORTHO05D003290 4.0e-16 91.3 225 27.6
FAN18G4196 Fragaria x ananassa HOM05D002759 ORTHO05D003290 4.4e-15 87.8 246 25.6
CsaV3_6G032170 Cucumis sativus L. HOM05D002759 ORTHO05D003290 8.3e-14 83.6 184 32.1
SEGI_36049 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.1e-13 83.2 211 28.4
AT5G28550 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 3.1e-13 81.6 136 34.6
MD00G1111200 Malus domestica HOM05D002759 ORTHO05D003290 5.3e-13 80.9 149 32.9
Gohir.A01G176550 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.0e-11 76.6 226 27.0
ATR0661G448 Amborella trichopoda HOM05D002759 ORTHO05D015291 1.7e-11 75.9 224 27.7
MD08G1225400 Malus domestica HOM05D002759 ORTHO05D003290 1.7e-11 75.9 159 32.1
Gohir.D01G167366 Gossypium hirsutum HOM05D002759 ORTHO05D003290 2.2e-11 75.5 223 27.4
SHI26606 Sapria himalayana HOM05D002759 ORTHO05D003290 8.5e-11 73.6 163 34.4
Hund17372 Selenicereus undatus HOM05D002759 ORTHO05D003290 1.5e-10 72.8 226 26.1
CSS0019427 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 3.2e-10 71.6 110 38.2
CARHR222380 Cardamine hirsuta HOM05D002759 ORTHO05D003290 4.2e-10 71.2 116 34.5
SHI26605 Sapria himalayana HOM05D002759 ORTHO05D003290 1.6e-09 69.3 158 30.4
CARHR284400 Cardamine hirsuta HOM05D002759 ORTHO05D003290 4.7e-09 67.8 98 33.7
Atru.chr12.1442 Acer truncatum HOM05D002759 ORTHO05D003290 1.0e-08 66.6 156 31.4
TAR629G0124 Trochodendron aralioides HOM05D002759 ORTHO05D021026 4.0e-08 64.7 110 40.0
RcHm_v2.0_Chr4g0428231 Rosa chinensis HOM05D002759 ORTHO05D020730 1.5e-07 62.8 131 29.8
TAR628G0627 Trochodendron aralioides HOM05D002759 ORTHO05D021026 1.5e-07 62.8 100 39.0
TAR628G1230 Trochodendron aralioides HOM05D002759 ORTHO05D021026 1.5e-07 62.8 100 39.0
C04p12980 Brassica napus HOM05D002759 ORTHO05D003290 4.4e-07 61.2 144 29.9


User provided reference genes

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