Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 2.4e-182 642.1 337 100.0
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 1.5e-139 500.0 337 76.6
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 9.7e-136 487.3 337 73.3
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 1.1e-131 473.8 337 73.0
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 1.5e-131 473.4 329 72.6
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 3.2e-131 472.2 329 73.3
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 1.2e-130 470.3 335 71.3
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 3.6e-130 468.8 337 71.2
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 3.6e-130 468.8 337 70.3
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 6.1e-130 468.0 329 72.6
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.0e-129 467.2 337 71.5
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 1.4e-129 466.8 337 71.2
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 4.0e-129 465.3 336 69.3
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 5.2e-129 464.9 337 71.5
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 6.8e-129 464.5 337 70.3
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.5e-128 463.4 337 71.5
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 9.8e-128 460.7 331 68.6
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 2.8e-127 459.1 337 69.7
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 3.7e-127 458.8 337 68.5
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 6.3e-127 458.0 332 69.6
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.4e-126 456.8 335 69.3
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 1.4e-126 456.8 336 69.0
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 3.1e-126 455.7 337 69.7
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 5.4e-126 454.9 336 68.5
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 7.0e-126 454.5 334 68.9
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 9.1e-126 454.1 374 66.3
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 1.6e-125 453.4 337 68.2
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 2.7e-125 452.6 335 69.6
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 2.7e-125 452.6 337 68.5
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 3.5e-125 452.2 336 68.2
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 4.5e-125 451.8 323 69.3
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 4.5e-125 451.8 330 69.4
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 4.5e-125 451.8 334 70.1
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 5.9e-125 451.4 337 68.0
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 1.0e-124 450.7 337 68.0
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 1.0e-124 450.7 336 68.2
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 1.0e-124 450.7 337 67.4
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 1.0e-124 450.7 336 67.9
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 2.9e-124 449.1 337 67.7
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 2.9e-124 449.1 326 69.6
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 6.5e-124 448.0 336 69.3
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 8.5e-124 447.6 336 67.3
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 8.5e-124 447.6 335 69.9
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 8.5e-124 447.6 337 67.7
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 1.9e-123 446.4 338 67.5
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 2.5e-123 446.0 337 67.1
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 2.5e-123 446.0 338 67.8
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 3.2e-123 445.7 337 68.5
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 4.2e-123 445.3 338 67.8
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 9.4e-123 444.1 329 66.9
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 1.2e-122 443.7 337 68.5
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 1.6e-122 443.4 328 68.9
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 1.6e-122 443.4 334 67.7
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.6e-122 443.4 337 68.8
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 2.7e-122 442.6 329 66.9
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 3.6e-122 442.2 337 67.4
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 3.6e-122 442.2 322 68.3
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 3.6e-122 442.2 333 68.8
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 3.6e-122 442.2 337 67.1
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 4.7e-122 441.8 337 67.4
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 6.1e-122 441.4 328 68.6
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 6.1e-122 441.4 332 67.5
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 1.4e-121 440.3 332 67.8
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 5.2e-121 438.3 334 66.8
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 4.4e-120 435.3 337 66.2
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 5.7e-120 434.9 332 67.2
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 1.3e-119 433.7 337 65.6
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 1.7e-119 433.3 339 66.1
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 1.7e-119 433.3 353 64.6
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 8.3e-119 431.0 307 70.0
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 1.8e-118 429.9 321 67.9
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 7.7e-117 424.5 358 63.4
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 1.7e-116 423.3 337 66.8
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 6.6e-116 421.4 321 67.3
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.5e-115 420.2 346 63.9
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 8.9e-113 411.0 398 57.5
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 2.9e-111 406.0 321 64.2
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 3.7e-111 405.6 337 64.7
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 8.3e-111 404.4 327 64.2
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 7.8e-109 397.9 337 62.9
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 2.1e-106 389.8 300 66.3
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 2.8e-106 389.4 337 62.0
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 2.2e-103 379.8 282 69.5
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 4.1e-102 375.6 336 60.4
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 2.7e-101 372.9 344 59.0
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 3.5e-101 372.5 337 59.1
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 4.7e-98 362.1 330 57.6
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 1.1e-94 350.9 331 55.0
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 8.6e-92 341.3 254 68.9
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 5.4e-86 322.0 207 76.8
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 5.4e-86 322.0 329 49.8
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 2.5e-83 313.2 242 65.7
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 9.6e-83 311.2 321 49.8
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 6.2e-82 308.5 197 76.6
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.4e-80 302.4 325 50.8
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.3e-76 290.0 325 48.3
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 2.8e-74 283.1 183 75.4
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 3.2e-70 269.6 202 69.3
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 1.7e-68 263.8 317 45.7
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 4.9e-63 245.7 241 56.8
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.4e-62 244.2 325 43.1
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 2.1e-61 240.4 351 38.5
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 9.6e-59 231.5 370 42.4
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 1.4e-54 217.6 164 66.5
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.3e-49 199.1 171 54.4
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 4.6e-45 186.0 150 67.3
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.2e-40 171.4 300 39.0
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.3e-39 167.9 283 39.2
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 3.0e-36 156.8 334 31.4
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 3.4e-32 143.3 125 62.4
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 6.1e-29 132.5 124 58.1
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 5.1e-28 129.4 88 71.6
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 2.3e-20 104.0 76 65.8
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 1.7e-18 97.8 338 27.5
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 4.2e-14 83.2 59 74.6
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 8.8e-12 75.5 52 69.2
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 8.8e-12 75.5 52 69.2


User provided reference genes

Program Settings