Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00584 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 4.0e-157 558.1 302 100.0
Aqoxy6G00905 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 1.2e-28 131.3 311 30.9
Aqoxy3G02433 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 6.2e-25 119.0 195 35.4
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 7.9e-20 102.1 291 25.8
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 3.9e-19 99.8 197 32.5
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 4.8e-17 92.8 234 29.1
AUR62017713 Chenopodium quinoa HOM05D008040 ORTHO05D010075 8.2e-17 92.0 198 31.3
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.1e-16 91.7 234 29.1
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.1e-16 91.7 235 28.5
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 5.3e-16 89.4 239 27.6
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 6.9e-16 89.0 233 28.8
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 6.9e-16 89.0 247 28.3
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 6.9e-16 89.0 248 29.4
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 9.0e-16 88.6 205 29.8
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.1e-13 81.6 232 27.6
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.9e-13 80.9 217 28.1
AUR62035995 Chenopodium quinoa HOM05D008040 ORTHO05D010075 5.5e-13 79.3 198 30.8
COL.COLO4_10419 Corchorus olitorius HOM05D026534 ORTHO05D010075 5.5e-13 79.3 200 28.0
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 5.5e-13 79.3 222 30.2
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 7.2e-13 79.0 224 28.6
COL.COLO4_14085 Corchorus olitorius HOM05D000206 ORTHO05D002863 1.2e-12 78.2 181 30.9
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.6e-12 77.8 222 28.8
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.1e-12 77.4 222 28.8
QL04p017690 Quercus lobata HOM05D008040 ORTHO05D010075 3.5e-12 76.6 190 30.0
SGA_v2.0_scaffold286G47115 Striga asiatica HOM05D008040 ORTHO05D010075 6.1e-12 75.9 209 28.2
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 7.9e-12 75.5 223 27.8
SGA_v2.0_scaffold147G36326 Striga asiatica HOM05D008040 ORTHO05D010075 1.0e-11 75.1 216 29.6
SGA_v2.0_scaffold286G47111 Striga asiatica HOM05D008040 ORTHO05D010075 1.0e-11 75.1 207 28.5
QL04p017640 Quercus lobata HOM05D008040 ORTHO05D010075 1.3e-11 74.7 190 29.5
QL09p019845 Quercus lobata HOM05D011629 ORTHO05D013267 1.8e-11 74.3 179 30.2
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 8.7e-11 72.0 208 27.9
Ciclev10026974m.g Citrus clementina HOM05D008040 ORTHO05D010075 5.7e-10 69.3 223 28.3
MBI05_g44031_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 1.3e-09 68.2 167 30.5
RcHm_v2.0_Chr2g0102901 Rosa chinensis HOM05D008040 ORTHO05D010075 1.3e-09 68.2 206 25.7
MD12G1051600 Malus domestica HOM05D008040 ORTHO05D010075 3.7e-09 66.6 209 24.9
FAN19G2662 Fragaria x ananassa HOM05D008040 ORTHO05D010075 6.3e-09 65.9 203 25.6
MD12G1211200 Malus domestica HOM05D008040 ORTHO05D010075 2.4e-08 63.9 210 24.8
MBI05_g35610_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 4.1e-08 63.2 205 28.3
FAN26G0836 Fragaria x ananassa HOM05D008040 ORTHO05D010075 6.9e-08 62.4 171 26.3
FvH4_1g14071 Fragaria vesca HOM05D008040 ORTHO05D010075 9.0e-08 62.0 177 27.1
FAN19G2417 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.2e-07 61.6 171 26.3
FAN23G2403 Fragaria x ananassa HOM05D008040 ORTHO05D010075 2.0e-07 60.8 204 24.5
Prupe.7G151200 Prunus persica HOM05D008040 ORTHO05D010075 2.6e-07 60.5 210 21.9
MBI05_g38417_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 1.3e-06 58.2 116 33.6
Os05g0177400 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 2.9e-06 57.0 227 26.0


User provided reference genes

Program Settings