Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00549 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 9.5e-158 560.5 355 100.0
PSO017G7367 Papaver somniferum HOM05D005253 ORTHO05D006058 2.8e-61 240.0 344 45.9
Aqoxy3G03749 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 4.5e-59 232.6 341 49.9
Cfa017731 Carpinus fangiana HOM05D005253 ORTHO05D006058 1.0e-55 221.5 342 43.0
Haze_18511 Corylus avellana HOM05D005253 ORTHO05D006058 6.8e-55 218.8 343 43.1
TWI60G1362 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 1.2e-54 218.0 340 41.5
TAR371G0033 Trochodendron aralioides HOM05D005253 ORTHO05D006058 2.0e-54 217.2 362 45.9
MBI14_g08108_MAGBIO Magnolia biondii HOM05D005253 ORTHO05D006058 2.6e-54 216.9 345 42.9
PSO478G2666 Papaver somniferum HOM05D005253 ORTHO05D006058 9.8e-54 214.9 345 42.6
Potri.004G107000 Populus trichocarpa HOM05D005253 ORTHO05D006058 2.2e-53 213.8 345 46.4
Gorai.001G067300 Gossypium raimondii HOM05D005253 ORTHO05D006058 8.3e-53 211.8 339 45.4
CANSAT80G0823 Cannabis sativa HOM05D005253 ORTHO05D006058 1.9e-52 210.7 344 45.9
vmacro17641 Vaccinium macrocarpon HOM05D005253 ORTHO05D006058 4.1e-52 209.5 365 42.5
Duzib205G1609 Durio zibethinus HOM05D005253 ORTHO05D006058 9.2e-52 208.4 339 43.7
Gohir.D07G063700 Gossypium hirsutum HOM05D005253 ORTHO05D006058 9.2e-52 208.4 339 41.0
GSVIVG01008154001 Vitis vinifera HOM05D005253 ORTHO05D006058 4.6e-51 206.1 354 39.3
TWI81G0215 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 1.3e-50 204.5 339 41.6
Nn3g17535 Nelumbo nucifera HOM05D005253 ORTHO05D006058 2.3e-50 203.8 338 46.2
Gohir.A09G243900 Gossypium hirsutum HOM05D005253 ORTHO05D006058 3.9e-50 203.0 336 40.5
Dinv38642 Davidia involucrata HOM05D005253 ORTHO05D006058 1.5e-49 201.1 344 40.1
Gohir.D09G244600 Gossypium hirsutum HOM05D005253 ORTHO05D006058 4.3e-49 199.5 336 44.3
Lj4g0025893 Lotus japonicus HOM05D005253 ORTHO05D006058 1.6e-48 197.6 293 41.0
Rhsim08G0142100 Rhododendron simsii HOM05D005253 ORTHO05D006058 4.7e-48 196.1 342 40.6
Duzib068G0534 Durio zibethinus HOM05D005253 ORTHO05D006058 6.8e-47 192.2 338 40.2
Dinv17459 Davidia involucrata HOM05D005253 ORTHO05D006058 8.9e-47 191.8 317 46.1
Medtr4g109960 Medicago truncatula HOM05D005253 ORTHO05D006058 2.6e-46 190.3 342 38.3
PSO782G3834 Papaver somniferum HOM05D005253 ORTHO05D006058 3.4e-46 189.9 343 40.8
Cc04_g08280 Coffea canephora HOM05D005253 ORTHO05D006058 7.5e-46 188.7 349 41.5
Gorai.006G268700 Gossypium raimondii HOM05D005253 ORTHO05D006058 7.5e-46 188.7 336 38.7
Glyma.17G081700 Glycine max HOM05D005253 ORTHO05D006058 9.8e-46 188.3 340 37.1
Glyma.05G018200 Glycine max HOM05D005253 ORTHO05D006058 3.7e-45 186.4 340 37.1
Gohir.A07G058832 Gossypium hirsutum HOM05D005253 ORTHO05D006058 1.4e-44 184.5 339 38.6
TPR.G1989 Trifolium pratense HOM05D005253 ORTHO05D006058 2.4e-44 183.7 338 37.6
Ciclev10020920m.g Citrus clementina HOM05D005253 ORTHO05D006058 4.1e-44 183.0 346 39.9
Lalb_Chr13g0302681 Lupinus albus HOM05D005253 ORTHO05D006058 2.7e-43 180.3 330 37.9
PSO063G5368 Papaver somniferum HOM05D005253 ORTHO05D006058 4.6e-43 179.5 343 39.9
MD14G1216600 Malus domestica HOM05D005253 ORTHO05D006058 1.0e-42 178.3 337 37.7
Sabra04G0074900 Salix brachista HOM05D005253 ORTHO05D006058 1.7e-42 177.6 283 53.7
arahy.Tifrunner.gnm1.ann1.TSF3K2 Arachis hypogaea HOM05D005253 ORTHO05D006058 3.0e-42 176.8 342 37.1
CSS0036905 Camellia sinensis var. sinensis HOM05D005253 ORTHO05D006058 3.0e-42 176.8 344 41.6
Phvul.003G182200 Phaseolus vulgaris HOM05D005253 ORTHO05D006058 5.1e-42 176.0 340 39.7
ATR0691G224 Amborella trichopoda HOM05D005253 ORTHO05D006058 6.6e-42 175.6 337 38.0
ClCG04G011560 Citrullus lanatus HOM05D005253 ORTHO05D006058 8.6e-42 175.3 349 45.6
TPR.G2086 Trifolium pratense HOM05D005253 ORTHO05D006058 1.9e-41 174.1 297 37.4
COL.COLO4_27496 Corchorus olitorius HOM05D005253 ORTHO05D006058 2.5e-41 173.7 323 39.9
Lsat_1_v5_gn_5_23380 Lactuca sativa HOM05D005253 ORTHO05D006058 3.3e-41 173.3 330 38.8
Prupe.5G210000 Prunus persica HOM05D005253 ORTHO05D006058 4.3e-41 172.9 342 37.7
ECA246G0831 Erigeron canadensis HOM05D005253 ORTHO05D006058 5.6e-41 172.6 344 40.1
MD06G1205700 Malus domestica HOM05D005253 ORTHO05D006058 9.5e-41 171.8 338 37.6
Cpa.g.sc3.232 Carica papaya HOM05D005253 ORTHO05D006058 1.6e-40 171.0 341 41.6
Hma1.2p1_0060F.1_g032740 Hydrangea macrophylla HOM05D005253 ORTHO05D006058 2.8e-40 170.2 376 38.6
Nitab4.5_0002467g0110 Nicotiana tabacum HOM05D005253 ORTHO05D006058 2.8e-40 170.2 344 37.2
VMungo1215G3162 Vigna mungo HOM05D005253 ORTHO05D006058 3.6e-40 169.9 361 37.7
Atru.chr4.1592 Acer truncatum HOM05D005253 ORTHO05D006058 1.1e-39 168.3 346 48.3
arahy.Tifrunner.gnm1.ann1.399KXC Arachis hypogaea HOM05D005253 ORTHO05D006058 1.4e-39 167.9 342 35.7
Sed0023471 Sechium edule HOM05D005253 ORTHO05D006058 8.9e-39 165.2 349 36.7
Peaxi162Scf00017g03254 Petunia axillaris HOM05D005253 ORTHO05D006058 2.0e-38 164.1 344 37.8
SHI17413 Sapria himalayana HOM05D005253 ORTHO05D006058 2.6e-38 163.7 292 38.0
Nitab4.5_0005994g0050 Nicotiana tabacum HOM05D005253 ORTHO05D006058 5.8e-38 162.5 337 37.1
Thhalv10014100m.g Eutrema salsugineum HOM05D005253 ORTHO05D006058 7.6e-38 162.2 335 36.4
MSTRG.9581 Avicennia marina HOM05D005253 ORTHO05D006058 1.3e-37 161.4 343 37.0
MELO3C002054.2 Cucumis melo HOM05D005253 ORTHO05D006058 2.2e-37 160.6 352 46.0
Peaxi162Scf00365g00114 Petunia axillaris HOM05D005253 ORTHO05D006058 2.9e-37 160.2 347 34.9
Manes.06G080800 Manihot esculenta HOM05D005253 ORTHO05D006058 3.7e-37 159.8 290 40.7
HanXRQChr05g0157441 Helianthus annuus HOM05D005253 ORTHO05D006058 4.9e-37 159.5 335 41.8
Ca_21755_v3 Cicer arietinum L. HOM05D005253 ORTHO05D006058 4.1e-36 156.4 341 40.2
DCAR_010175 Daucus carota HOM05D005253 ORTHO05D006058 5.4e-36 156.0 343 37.9
SalBow7G2030 Salvia bowleyana HOM05D005253 ORTHO05D006058 5.4e-36 156.0 356 36.0
Solyc03g114760.3 Solanum lycopersicum HOM05D005253 ORTHO05D006058 7.1e-36 155.6 364 34.6
C09p68830 Brassica napus HOM05D005253 ORTHO05D006058 2.1e-35 154.1 333 37.2
PGSC0003DMG400024524 Solanum tuberosum HOM05D005253 ORTHO05D006058 2.1e-35 154.1 364 35.4
Manes.14G089100 Manihot esculenta HOM05D005253 ORTHO05D006058 4.6e-35 152.9 346 33.8
Nitab4.5_0002041g0040 Nicotiana tabacum HOM05D005253 ORTHO05D006058 4.6e-35 152.9 346 34.7
BcaB08g37285 Brassica carinata HOM05D005253 ORTHO05D006058 6.0e-35 152.5 333 36.9
Sopen03g033840 Solanum pennellii HOM05D005253 ORTHO05D006058 7.8e-35 152.1 364 34.3
QL10p020742 Quercus lobata HOM05D005253 ORTHO05D006058 1.3e-34 151.4 506 28.9
SGA_v2.0_scaffold65G22104 Striga asiatica HOM05D005253 ORTHO05D006058 1.3e-34 151.4 337 34.4
CsaV3_1G006260 Cucumis sativus L. HOM05D005253 ORTHO05D006058 3.0e-34 150.2 352 47.4
FAN08G1625 Fragaria x ananassa HOM05D005253 ORTHO05D006058 3.0e-34 150.2 332 34.9
FAN13G1214 Fragaria x ananassa HOM05D005253 ORTHO05D006058 3.0e-34 150.2 333 35.1
Lj1g0009577 Lotus japonicus HOM05D005253 ORTHO05D006058 3.0e-34 150.2 293 37.2
Aa31LG3G18420 Aethionema arabicum HOM05D005253 ORTHO05D006058 3.9e-34 149.8 335 46.3
Zm00001eb380690 Zea mays HOM05D005253 ORTHO05D006058 3.9e-34 149.8 312 35.3
CDE05G1733 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 6.6e-34 149.1 284 38.0
FvH4_5g13401 Fragaria vesca HOM05D005253 ORTHO05D006058 6.6e-34 149.1 333 35.4
AL6G18490 Arabidopsis lyrata HOM05D005253 ORTHO05D006058 1.9e-33 147.5 335 34.0
CiPaw.16G080100 Carya illinoinensis HOM05D005253 ORTHO05D006058 1.9e-33 147.5 259 43.6
Oeu014427.1 Olea europaea HOM05D005253 ORTHO05D006058 2.5e-33 147.1 337 35.0
RcHm_v2.0_Chr7g0183731 Rosa chinensis HOM05D005253 ORTHO05D006058 2.5e-33 147.1 334 36.8
CARHR205070 Cardamine hirsuta HOM05D005253 ORTHO05D006058 7.3e-33 145.6 334 37.4
HanXRQChr02g0051141 Helianthus annuus HOM05D005253 ORTHO05D006058 7.3e-33 145.6 320 40.3
THA.LOC104818357 Tarenaya hassleriana HOM05D005253 ORTHO05D006058 9.6e-33 145.2 340 33.2
BraA10t44904Z Brassica rapa HOM05D005253 ORTHO05D006058 1.2e-32 144.8 334 35.6
Psat4g046080 Pisum sativum HOM05D005253 ORTHO05D006058 1.2e-32 144.8 287 43.2
AT5G08120 Arabidopsis thaliana HOM05D005253 ORTHO05D006058 1.6e-32 144.4 335 33.4
BolC9t59630H Brassica oleracea HOM05D005253 ORTHO05D006058 1.6e-32 144.4 334 41.0
Ah.11g047400 Amaranthus hybridus HOM05D005253 ORTHO05D006058 1.4e-31 141.4 291 36.8
Hund09956 Selenicereus undatus HOM05D005253 ORTHO05D006058 1.8e-31 141.0 334 32.6
Sc04g0003900 Simmondsia chinensis HOM05D005253 ORTHO05D006058 1.8e-31 141.0 318 33.3
Hund02544 Selenicereus undatus HOM05D005253 ORTHO05D006058 4.0e-31 139.8 309 34.0
FAN18G4071 Fragaria x ananassa HOM05D005253 ORTHO05D006058 5.2e-31 139.4 349 33.8
Eucgr.K02550 Eucalyptus grandis HOM05D005253 ORTHO05D006058 1.2e-30 138.3 258 38.0
Glyma.04G159100 Glycine max HOM05D005253 ORTHO05D006058 1.5e-30 137.9 283 30.7
HPP92_015550 Vanilla planifolia HOM05D005253 ORTHO05D006058 1.5e-30 137.9 283 35.7
Thecc.03G108400 Theobroma cacao HOM05D005253 ORTHO05D006058 5.8e-30 136.0 235 38.7
Zm00001eb280850 Zea mays HOM05D005253 ORTHO05D006058 7.6e-30 135.6 286 35.0
Sp6g34840 Schrenkiella parvula HOM05D005253 ORTHO05D006058 9.9e-30 135.2 335 38.2
Prupe.8G074000 Prunus persica HOM05D005253 ORTHO05D006058 1.3e-29 134.8 238 37.4
EL10Ac5g11189 Beta vulgaris HOM05D005253 ORTHO05D006058 2.2e-29 134.0 321 31.8
unitig_578.g15937 Utricularia gibba HOM05D005253 ORTHO05D006058 2.2e-29 134.0 342 33.3
PGR044G0085 Punica granatum HOM05D005253 ORTHO05D006058 2.9e-29 133.7 360 30.8
Lj9C438G4 Lonicera japonica HOM05D005253 ORTHO05D006058 8.4e-29 132.1 325 36.0
AUR62039667 Chenopodium quinoa HOM05D005253 ORTHO05D006058 1.4e-28 131.3 289 33.9
Migut.D01615 Erythranthe guttata HOM05D005253 ORTHO05D006058 1.4e-28 131.3 344 35.5
Os06g0284800 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 1.2e-27 128.3 291 39.5
Ah.02g114240 Amaranthus hybridus HOM05D005253 ORTHO05D006058 2.3e-26 124.0 295 30.8
HPP92_019902 Vanilla planifolia HOM05D005253 ORTHO05D006058 2.3e-26 124.0 283 34.6
CAN.G982.39 Capsicum annuum HOM05D005253 ORTHO05D006058 8.7e-26 122.1 419 27.7
Nitab4.5_0001797g0020 Nicotiana tabacum HOM05D005253 ORTHO05D006058 8.7e-26 122.1 249 37.3
A10p28550 Brassica napus HOM05D005253 ORTHO05D006058 9.6e-25 118.6 334 32.9
AUR62032138 Chenopodium quinoa HOM05D005253 ORTHO05D006058 1.5e-22 111.3 265 32.1
unitig_8.g4498 Utricularia gibba HOM05D005253 ORTHO05D006058 7.6e-22 109.0 340 31.5
Carub.0006s0700 Capsella rubella HOM05D005253 ORTHO05D006058 1.3e-21 108.2 333 32.7
CDE02G3817 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 1.3e-21 108.2 309 31.7
arahy.Tifrunner.gnm1.ann1.4B3W67 Arachis hypogaea HOM05D005253 ORTHO05D006058 7.1e-20 102.4 292 36.6
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 3.0e-18 97.1 330 33.0
BcaB08g37286 Brassica carinata HOM05D005460 ORTHO05D006058 5.1e-18 96.3 187 43.9
arahy.Tifrunner.gnm1.ann1.U6KDHT Arachis hypogaea HOM05D005253 ORTHO05D006058 2.5e-17 94.0 287 36.2
Actinidia04794 Actinidia chinensis HOM05D005253 ORTHO05D006058 3.3e-17 93.6 118 51.7
Os09g0476000 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 1.3e-16 91.7 193 34.7
Nn4g23537 Nelumbo nucifera HOM05D005253 ORTHO05D006058 6.9e-15 85.9 94 55.3
Nn4g23536 Nelumbo nucifera HOM05D005253 ORTHO05D006058 3.2e-12 77.0 88 45.5
Actinidia10441 Actinidia chinensis HOM05D005253 ORTHO05D006058 2.7e-11 73.9 84 51.2
Zm00001eb315970 Zea mays HOM05D005253 ORTHO05D006058 2.3e-10 70.9 260 28.1
SEGI_36320 Sequoiadendron giganteum HOM05D005253 ORTHO05D006058 5.6e-09 66.2 354 23.7
Actinidia04795 Actinidia chinensis HOM05D005253 ORTHO05D006058 6.2e-08 62.8 155 31.0
Oeu014549.1 Olea europaea HOM05D005253 ORTHO05D006058 8.1e-08 62.4 103 49.5
Peaxi162Scf00091g00143 Petunia axillaris HOM05D005253 ORTHO05D006058 1.1e-07 62.0 237 27.0
PSO063G4277 Papaver somniferum HOM05D005253 ORTHO05D006058 1.4e-07 61.6 85 42.4
TPR.G28909 Trifolium pratense HOM05D005253 ORTHO05D006058 4.5e-06 56.6 94 40.4
AagrBONN_evm.TU.Sc2ySwM_368.1809 Anthoceros agrestis HOM05D025852 ORTHO05D031190 1.0e-05 55.5 151 31.8


User provided reference genes

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