Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 1.1e-104 383.3 194 100.0
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 1.8e-73 279.6 193 69.9
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 3.5e-69 265.4 194 66.5
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 2.2e-68 262.7 189 68.3
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 2.5e-67 259.2 175 70.9
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 5.5e-67 258.1 179 68.7
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 2.1e-66 256.1 171 70.8
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 2.7e-66 255.8 194 67.5
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 4.7e-66 255.0 192 65.1
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 8.0e-66 254.2 190 64.7
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 1.0e-65 253.8 187 67.4
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 1.8e-65 253.1 176 68.2
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 3.0e-65 252.3 168 72.6
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 8.8e-65 250.8 176 67.6
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 1.2e-64 250.4 172 70.9
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 2.0e-64 249.6 174 67.8
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 2.0e-64 249.6 173 70.5
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 2.0e-64 249.6 175 70.3
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 3.4e-64 248.8 190 61.1
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 4.4e-64 248.4 193 64.2
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 4.4e-64 248.4 185 64.9
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 7.5e-64 247.7 186 64.0
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 1.7e-63 246.5 196 65.3
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 1.7e-63 246.5 191 61.3
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 1.7e-63 246.5 177 68.4
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 2.2e-63 246.1 169 70.4
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 2.2e-63 246.1 169 69.8
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 2.8e-63 245.7 191 65.4
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 2.8e-63 245.7 177 67.2
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 3.7e-63 245.4 192 62.5
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 3.7e-63 245.4 177 67.2
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 4.8e-63 245.0 172 65.7
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 6.3e-63 244.6 175 69.1
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 6.3e-63 244.6 177 66.7
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 1.4e-62 243.4 170 69.4
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 1.4e-62 243.4 190 62.6
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 1.4e-62 243.4 188 61.7
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 1.8e-62 243.0 170 68.8
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 1.8e-62 243.0 179 65.9
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 5.4e-62 241.5 169 68.6
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 7.0e-62 241.1 174 65.5
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 9.1e-62 240.7 168 69.6
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.6e-61 240.0 187 62.0
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 2.0e-61 239.6 147 74.1
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 2.7e-61 239.2 169 68.0
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 2.7e-61 239.2 177 64.4
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 5.9e-61 238.0 175 68.0
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 1.0e-60 237.3 194 66.5
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 8.5e-60 234.2 174 71.8
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 3.2e-59 232.3 188 62.8
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 3.2e-59 232.3 173 64.2
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 4.2e-59 231.9 154 69.5
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 7.2e-59 231.1 219 59.8
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 9.4e-59 230.7 147 74.1
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 1.2e-58 230.3 179 64.2
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 1.2e-58 230.3 169 65.7
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 2.3e-57 226.1 159 69.8
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 6.8e-57 224.6 151 68.2
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 6.8e-57 224.6 175 60.0
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 1.2e-56 223.8 198 59.6
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 2.0e-56 223.0 185 60.5
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 5.7e-56 221.5 167 67.1
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 9.8e-56 220.7 176 63.1
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 2.8e-55 219.2 134 75.4
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 4.9e-55 218.4 193 56.5
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 6.3e-55 218.0 134 73.9
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 8.3e-55 217.6 173 61.3
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 1.1e-54 217.2 175 61.1
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 1.8e-54 216.5 178 61.2
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 2.4e-54 216.1 173 61.8
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 2.4e-54 216.1 173 61.8
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 2.4e-54 216.1 173 61.8
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 2.4e-54 216.1 173 61.8
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 2.4e-54 216.1 173 61.8
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 2.4e-54 216.1 173 61.3
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 5.4e-54 214.9 173 61.3
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 5.4e-54 214.9 175 61.7
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 7.0e-54 214.5 173 59.5
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 1.2e-53 213.8 172 62.2
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 1.6e-53 213.4 134 72.4
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.6e-53 213.4 157 63.1
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 3.5e-53 212.2 173 60.7
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 5.6e-51 204.9 165 64.8
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.6e-50 203.4 189 57.1
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.1e-50 203.0 202 53.5
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 4.7e-50 201.8 163 62.0
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 4.7e-50 201.8 163 62.0
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.1e-50 201.4 163 62.0
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 2.0e-48 196.4 135 64.4
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 5.7e-48 194.9 175 57.7
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 6.4e-47 191.4 152 63.2
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 4.6e-45 185.3 143 63.6
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 2.5e-43 179.5 113 70.8
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 4.0e-41 172.2 207 50.2
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 3.7e-39 165.6 138 62.3
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 2.7e-37 159.5 140 57.1
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 2.3e-36 156.4 181 47.5
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 3.3e-35 152.5 164 48.8
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 2.3e-33 146.4 141 48.9
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.6e-29 133.7 149 47.0
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 3.0e-28 129.4 77 71.4
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 2.9e-23 112.8 111 61.3
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 8.4e-23 111.3 65 75.4
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.2e-18 97.4 121 47.9
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 2.8e-18 96.3 82 56.1
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 5.2e-17 92.0 96 55.2
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 2.6e-16 89.7 97 55.7
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 1.7e-15 87.0 63 63.5
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 1.1e-14 84.3 51 72.5
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 3.9e-12 75.9 62 59.7
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.7e-07 60.5 37 64.9


User provided reference genes

Program Settings