Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00506 Aquilegia oxysepala HOM05D006060 ORTHO05D007268 2.6e-81 305.4 166 100.0
RcHm_v2.0_Chr4g0438511 Rosa chinensis HOM05D006060 ORTHO05D007268 6.2e-51 204.5 115 87.8
PGR102G1832 Punica granatum HOM05D006060 ORTHO05D007268 2.0e-49 199.5 115 83.5
FvH4_4g30180 Fragaria vesca HOM05D006060 ORTHO05D007268 3.4e-49 198.7 113 85.8
Prupe.1G285900 Prunus persica HOM05D006060 ORTHO05D007268 1.3e-48 196.8 113 84.1
Atru.chr11.1651 Acer truncatum HOM05D006060 ORTHO05D007268 2.2e-48 196.1 113 84.1
MD13G1063500 Malus domestica HOM05D006060 ORTHO05D007268 4.9e-48 194.9 113 82.3
MD16G1062000 Malus domestica HOM05D006060 ORTHO05D007268 1.1e-47 193.7 113 81.4
Psat2g129720 Pisum sativum HOM05D006060 ORTHO05D007268 1.1e-47 193.7 115 81.7
Ciclev10033030m.g Citrus clementina HOM05D006060 ORTHO05D007268 2.4e-47 192.6 115 80.0
Sed0026741 Sechium edule HOM05D006060 ORTHO05D007268 2.4e-47 192.6 115 80.9
MELO3C012147.2 Cucumis melo HOM05D006060 ORTHO05D007268 5.4e-47 191.4 115 81.7
TAR622G0987 Trochodendron aralioides HOM05D006060 ORTHO05D007268 7.1e-47 191.0 115 80.9
Ca_24569_v3 Cicer arietinum L. HOM05D006060 ORTHO05D007268 9.3e-47 190.7 115 79.1
FAN22G0197 Fragaria x ananassa HOM05D006060 ORTHO05D007268 1.2e-46 190.3 120 80.0
Potri.010G159200 Populus trichocarpa HOM05D006060 ORTHO05D007268 1.6e-46 189.9 113 80.5
THA.LOC104822014 Tarenaya hassleriana HOM05D006060 ORTHO05D007268 1.6e-46 189.9 115 80.9
CsaV3_5G033260 Cucumis sativus L. HOM05D006060 ORTHO05D007268 2.1e-46 189.5 115 80.9
MBI16_g10268_MAGBIO Magnolia biondii HOM05D006060 ORTHO05D007268 2.1e-46 189.5 113 82.3
CiPaw.06G092000 Carya illinoinensis HOM05D006060 ORTHO05D007268 2.7e-46 189.1 115 80.9
Manes.01G028500 Manihot esculenta HOM05D006060 ORTHO05D007268 4.6e-46 188.3 113 79.6
Potri.008G095100 Populus trichocarpa HOM05D006060 ORTHO05D007268 7.8e-46 187.6 113 79.6
Thecc.02G332700 Theobroma cacao HOM05D006060 ORTHO05D007268 1.0e-45 187.2 115 79.1
HPP92_014051 Vanilla planifolia HOM05D006060 ORTHO05D007268 1.0e-45 187.2 115 77.4
Gohir.A13G081800 Gossypium hirsutum HOM05D006060 ORTHO05D007268 1.3e-45 186.8 113 77.9
Gohir.D13G081600 Gossypium hirsutum HOM05D006060 ORTHO05D007268 1.3e-45 186.8 113 77.9
Gorai.013G093500 Gossypium raimondii HOM05D006060 ORTHO05D007268 1.3e-45 186.8 113 77.9
Phvul.002G282400 Phaseolus vulgaris HOM05D006060 ORTHO05D007268 1.3e-45 186.8 113 76.1
Duzib248G0204 Durio zibethinus HOM05D006060 ORTHO05D007268 1.7e-45 186.4 113 78.8
Eucgr.G02454 Eucalyptus grandis HOM05D006060 ORTHO05D007268 1.7e-45 186.4 114 81.6
TPR.G24456 Trifolium pratense HOM05D006060 ORTHO05D007268 2.3e-45 186.0 113 78.8
Glyma.05G201000 Glycine max HOM05D006060 ORTHO05D007268 3.0e-45 185.7 113 77.9
VMungo0251G0770 Vigna mungo HOM05D006060 ORTHO05D007268 3.9e-45 185.3 113 76.1
Nn4g23399 Nelumbo nucifera HOM05D006060 ORTHO05D007268 6.6e-45 184.5 115 81.7
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea HOM05D006060 ORTHO05D007268 1.5e-44 183.3 116 76.7
HanXRQChr15g0477061 Helianthus annuus HOM05D006060 ORTHO05D007268 1.9e-44 183.0 115 80.0
ClCG00G002570 Citrullus lanatus HOM05D006060 ORTHO05D007268 3.3e-44 182.2 128 73.4
ClCG05G023750 Citrullus lanatus HOM05D006060 ORTHO05D007268 3.3e-44 182.2 128 73.4
ATR0064G055 Amborella trichopoda HOM05D006060 ORTHO05D007268 4.3e-44 181.8 113 77.0
AT1G26470 Arabidopsis thaliana HOM05D006060 ORTHO05D007268 7.3e-44 181.0 115 78.3
Thhalv10009087m.g Eutrema salsugineum HOM05D006060 ORTHO05D007268 7.3e-44 181.0 115 77.4
CANSAT64G1324 Cannabis sativa HOM05D006060 ORTHO05D007268 9.6e-44 180.6 115 77.4
ECA246G0948 Erigeron canadensis HOM05D006060 ORTHO05D007268 9.6e-44 180.6 115 78.3
Medtr5g044200 Medicago truncatula HOM05D006060 ORTHO05D007268 9.6e-44 180.6 115 73.9
PSO017G1874 Papaver somniferum HOM05D006060 ORTHO05D007268 9.6e-44 180.6 115 81.7
Carub.0001s2455 Capsella rubella HOM05D006060 ORTHO05D007268 1.3e-43 180.3 115 76.5
Lalb_Chr04g0255711 Lupinus albus HOM05D006060 ORTHO05D007268 1.3e-43 180.3 115 73.0
Glyma.08G008300 Glycine max HOM05D006060 ORTHO05D007268 2.1e-43 179.5 115 76.5
Lsat_1_v5_gn_3_55960 Lactuca sativa HOM05D006060 ORTHO05D007268 2.1e-43 179.5 115 78.3
Dinv16724 Davidia involucrata HOM05D006060 ORTHO05D007268 2.8e-43 179.1 113 77.0
AL1G39270 Arabidopsis lyrata HOM05D006060 ORTHO05D007268 3.6e-43 178.7 115 76.5
Sc11g0002390 Simmondsia chinensis HOM05D006060 ORTHO05D007268 3.6e-43 178.7 113 75.2
CARHR025490 Cardamine hirsuta HOM05D006060 ORTHO05D007268 4.8e-43 178.3 115 76.5
Lj2g0026655 Lotus japonicus HOM05D006060 ORTHO05D007268 4.8e-43 178.3 113 75.2
Sp1g22270 Schrenkiella parvula HOM05D006060 ORTHO05D007268 4.8e-43 178.3 115 75.7
BcaB03g14067 Brassica carinata HOM05D006060 ORTHO05D007268 8.1e-43 177.6 115 74.8
PSO478G3582 Papaver somniferum HOM05D006060 ORTHO05D007268 1.1e-42 177.2 115 80.9
CSS0014880 Camellia sinensis var. sinensis HOM05D006060 ORTHO05D007268 2.4e-42 176.0 115 74.8
QL03p072164 Quercus lobata HOM05D006060 ORTHO05D007268 3.1e-42 175.6 138 65.2
QL03p072544 Quercus lobata HOM05D006060 ORTHO05D007268 3.1e-42 175.6 138 65.2
HanXRQChr12g0375301 Helianthus annuus HOM05D006060 ORTHO05D007268 6.9e-42 174.5 115 75.7
C05p24530 Brassica napus HOM05D006060 ORTHO05D007268 9.0e-42 174.1 113 77.0
MD02G1257200 Malus domestica HOM05D006060 ORTHO05D007268 9.0e-42 174.1 113 74.3
Duzib251G0249 Durio zibethinus HOM05D006060 ORTHO05D007268 2.6e-41 172.6 115 73.9
TWI31G0802 Tripterygium wilfordii HOM05D006060 ORTHO05D007268 2.6e-41 172.6 125 69.6
BcaC06g35142 Brassica carinata HOM05D006060 ORTHO05D007268 5.8e-41 171.4 113 76.1
Os05g0512500 Oryza sativa ssp. japonica HOM05D006060 ORTHO05D007268 5.8e-41 171.4 113 71.7
Dinv34077 Davidia involucrata HOM05D006060 ORTHO05D007268 9.9e-41 170.6 115 73.9
GSVIVG01012208001 Vitis vinifera HOM05D006060 ORTHO05D007268 1.3e-40 170.2 117 73.5
A07p12940 Brassica napus HOM05D006060 ORTHO05D007268 4.9e-40 168.3 120 72.5
BolC7t42457H Brassica oleracea HOM05D006060 ORTHO05D007268 4.9e-40 168.3 120 72.5
Aa31LG7G8620 Aethionema arabicum HOM05D006060 ORTHO05D007268 8.4e-40 167.5 121 70.2
A09p39890 Brassica napus HOM05D006060 ORTHO05D007268 1.1e-39 167.2 145 63.4
Zm00001eb292660 Zea mays HOM05D006060 ORTHO05D007268 1.1e-39 167.2 107 75.7
EL10Ac6g14984 Beta vulgaris HOM05D006060 ORTHO05D007268 1.9e-39 166.4 126 65.9
BolC5t31187H Brassica oleracea HOM05D006060 ORTHO05D007268 3.2e-39 165.6 127 68.5
C07p19380 Brassica napus HOM05D006060 ORTHO05D007268 4.2e-39 165.2 128 68.0
CAN.G616.32 Capsicum annuum HOM05D006060 ORTHO05D007268 9.3e-39 164.1 113 71.7
Hund05841 Selenicereus undatus HOM05D006060 ORTHO05D007268 2.7e-38 162.5 115 69.6
SEGI_32210 Sequoiadendron giganteum HOM05D006060 ORTHO05D007268 1.0e-37 160.6 115 69.6
CDE02G4092 Ceratophyllum demersum HOM05D006060 ORTHO05D007268 3.0e-37 159.1 115 71.3
Medtr6g053980 Medicago truncatula HOM05D006060 ORTHO05D007268 3.0e-37 159.1 113 67.3
FAN07G0043 Fragaria x ananassa HOM05D006060 ORTHO05D007268 6.7e-37 157.9 113 73.5
Sopen05g007220 Solanum pennellii HOM05D006060 ORTHO05D007268 4.3e-36 155.2 113 67.3
PGSC0003DMG400028321 Solanum tuberosum HOM05D006060 ORTHO05D007268 4.3e-36 155.2 145 58.6
FAN12G2760 Fragaria x ananassa HOM05D006060 ORTHO05D007268 5.6e-36 154.8 113 72.6
Solyc05g012400.4 Solanum lycopersicum HOM05D006060 ORTHO05D007268 9.6e-36 154.1 113 66.4
SalBow2G0810 Salvia bowleyana HOM05D006060 ORTHO05D007268 4.8e-35 151.8 115 62.6
Oeu048147.1 Olea europaea HOM05D006060 ORTHO05D007268 6.2e-35 151.4 115 63.5
Hund25185 Selenicereus undatus HOM05D006060 ORTHO05D007268 6.2e-35 151.4 147 55.1
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 4.0e-34 148.7 106 74.5
SGA_v2.0_scaffold36G14451 Striga asiatica HOM05D006060 ORTHO05D007268 1.2e-33 147.1 115 60.0
AUR62003112 Chenopodium quinoa HOM05D006060 ORTHO05D007268 1.5e-33 146.7 170 48.2
MSTRG.7750 Avicennia marina HOM05D006060 ORTHO05D007268 2.0e-33 146.4 112 62.5
Sabra10G0120900 Salix brachista HOM05D006060 ORTHO05D007268 4.5e-33 145.2 115 67.8
unitig_747.g21188 Utricularia gibba HOM05D006060 ORTHO05D007268 4.5e-33 145.2 115 60.9
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea HOM05D006060 ORTHO05D007268 7.6e-33 144.4 129 61.2
Migut.L01198 Erythranthe guttata HOM05D006060 ORTHO05D007268 1.7e-32 143.3 114 62.3
Lalb_Chr10g0098731 Lupinus albus HOM05D006060 ORTHO05D007268 1.7e-32 143.3 92 73.9
Peaxi162Scf00175g00019 Petunia axillaris HOM05D006060 ORTHO05D007268 6.5e-32 141.4 90 73.3
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 1.9e-31 139.8 85 78.8
A03p24590 Brassica napus HOM05D006060 ORTHO05D007268 1.9e-31 139.8 111 67.6
BraA07t29067Z Brassica rapa HOM05D006060 ORTHO05D007268 4.2e-31 138.7 115 65.2
Nitab4.5_0000231g0430 Nicotiana tabacum HOM05D006060 ORTHO05D007268 4.2e-31 138.7 88 72.7
BraA09t39056Z Brassica rapa HOM05D006060 ORTHO05D007268 7.1e-31 137.9 111 66.7
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 2.7e-30 136.0 108 63.9
SMO351G0453 Selaginella moellendorffii HOM05D006060 ORTHO05D007268 1.0e-29 134.0 104 64.4
Ah.03g138960 Amaranthus hybridus HOM05D006060 ORTHO05D007268 1.8e-29 133.3 115 60.0
PGSC0003DMG400042856 Solanum tuberosum HOM05D006060 ORTHO05D007268 1.8e-29 133.3 113 59.3
SGA_v2.0_scaffold16G07773 Striga asiatica HOM05D006060 ORTHO05D007268 3.9e-29 132.1 127 52.8
Sabra08G0071500 Salix brachista HOM05D006060 ORTHO05D007268 8.7e-29 131.0 133 54.1
Mapoly0056s0111 Marchantia polymorpha HOM05D006060 ORTHO05D007268 1.5e-28 130.2 105 61.0
BraA09t39488Z Brassica rapa HOM05D006060 ORTHO05D007268 1.9e-28 129.8 100 68.0
Sopen05g007230 Solanum pennellii HOM05D006060 ORTHO05D007268 7.4e-28 127.9 113 59.3
Actinidia28644 Actinidia chinensis HOM05D006060 ORTHO05D007268 1.6e-27 126.7 117 59.0
Solyc05g012410.2 Solanum lycopersicum HOM05D006060 ORTHO05D007268 8.2e-27 124.4 113 57.5
Nitab4.5_0004171g0060 Nicotiana tabacum HOM05D006060 ORTHO05D007268 1.1e-26 124.0 84 71.4
Haze_11918 Corylus avellana HOM05D006060 ORTHO05D007268 3.1e-26 122.5 70 82.9
Pp3c14_19070 Physcomitrium patens HOM05D006060 ORTHO05D007268 3.1e-26 122.5 100 60.0
COL.COLO4_27898 Corchorus olitorius HOM05D006060 ORTHO05D007268 3.8e-24 115.5 69 79.7
AUR62007927 Chenopodium quinoa HOM05D006060 ORTHO05D007268 2.1e-22 109.8 170 40.0
Cc11_g12110 Coffea canephora HOM05D006060 ORTHO05D007268 1.0e-21 107.5 70 70.0
PGSC0003DMG400041308 Solanum tuberosum HOM05D006060 ORTHO05D007268 1.9e-20 103.2 107 54.2
C02p24560 Brassica napus HOM05D006060 ORTHO05D007268 2.2e-19 99.8 82 64.6
TPR.G29681 Trifolium pratense HOM05D006060 ORTHO05D007268 1.0e-13 80.9 60 66.7
A07p29750 Brassica napus HOM05D006060 ORTHO05D007268 2.3e-13 79.7 83 56.6
CBR_g4585 Chara braunii HOM05D006060 ORTHO05D007268 1.1e-12 77.4 66 50.0
BcaB03g11990 Brassica carinata HOM05D006060 ORTHO05D007268 4.3e-12 75.5 49 75.5
DCAR_007189 Daucus carota HOM05D006060 ORTHO05D007268 6.9e-10 68.2 48 64.6
Cc11_g12100 Coffea canephora HOM05D006060 ORTHO05D007268 2.9e-08 62.8 65 53.8
SHI21665 Sapria himalayana HOM05D000105 ORTHO05D000023 1.9e-07 60.1 46 67.4
Duzib251G0730 Durio zibethinus HOM05D006060 ORTHO05D007268 1.2e-06 57.4 56 53.6


User provided reference genes

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