Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 2.8e-88 328.6 162 100.0
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 1.3e-66 256.5 158 75.3
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 3.0e-66 255.4 152 78.9
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 7.4e-65 250.8 157 76.4
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 1.6e-64 249.6 153 75.8
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 2.8e-64 248.8 157 76.4
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 2.8e-64 248.8 157 75.2
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 2.8e-64 248.8 158 75.3
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 3.7e-64 248.4 157 75.8
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 3.7e-64 248.4 152 75.7
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 4.8e-64 248.1 162 71.6
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 6.2e-64 247.7 153 75.8
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 6.2e-64 247.7 156 76.3
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 6.2e-64 247.7 153 73.9
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 8.1e-64 247.3 156 76.9
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 1.1e-63 246.9 157 75.2
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 1.1e-63 246.9 151 76.2
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 1.1e-63 246.9 153 77.1
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 1.4e-63 246.5 151 76.2
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 1.4e-63 246.5 157 75.2
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 1.8e-63 246.1 152 75.7
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 4.0e-63 245.0 157 74.5
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 5.3e-63 244.6 158 74.1
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 6.9e-63 244.2 155 74.2
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 1.2e-62 243.4 155 74.2
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 2.0e-62 242.7 157 73.2
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 2.6e-62 242.3 155 72.9
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 4.5e-62 241.5 152 73.7
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 7.6e-62 240.7 158 72.8
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 1.0e-61 240.4 157 73.2
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 1.0e-61 240.4 149 75.8
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 1.0e-61 240.4 149 75.8
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 1.0e-61 240.4 156 69.9
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 1.7e-61 239.6 155 71.6
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 1.7e-61 239.6 152 72.4
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 2.9e-61 238.8 153 73.2
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 4.9e-61 238.0 149 75.2
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 4.9e-61 238.0 149 75.2
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 4.9e-61 238.0 151 74.2
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 4.9e-61 238.0 156 69.2
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 6.5e-61 237.7 157 70.7
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 6.5e-61 237.7 149 73.2
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 8.4e-61 237.3 152 73.0
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 8.4e-61 237.3 158 70.9
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 8.4e-61 237.3 151 71.5
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 1.1e-60 236.9 151 72.2
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 1.4e-60 236.5 156 69.2
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 1.4e-60 236.5 155 71.0
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 1.4e-60 236.5 151 74.8
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 1.9e-60 236.1 158 70.9
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 1.9e-60 236.1 158 70.3
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.9e-60 236.1 151 72.2
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 2.5e-60 235.7 156 68.6
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 5.5e-60 234.6 156 69.2
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 5.5e-60 234.6 151 71.5
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 7.1e-60 234.2 148 72.3
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 9.3e-60 233.8 151 69.5
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 2.1e-59 232.6 156 68.6
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 2.7e-59 232.3 193 61.1
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 3.5e-59 231.9 155 68.4
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 7.9e-59 230.7 157 66.9
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 7.9e-59 230.7 156 69.2
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 7.9e-59 230.7 152 67.1
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 1.3e-58 229.9 152 68.4
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 2.3e-58 229.2 152 70.4
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 3.0e-58 228.8 148 70.9
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 5.1e-58 228.0 161 69.6
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 8.7e-58 227.3 149 70.5
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 8.7e-58 227.3 153 71.9
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 8.7e-58 227.3 155 66.5
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 1.1e-57 226.9 160 68.8
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 1.1e-57 226.9 153 69.9
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 1.5e-57 226.5 134 80.6
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 1.5e-57 226.5 149 67.8
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 3.3e-57 225.3 149 67.1
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 4.3e-57 224.9 154 69.5
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 4.3e-57 224.9 154 69.5
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 1.3e-56 223.4 134 77.6
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 1.3e-56 223.4 161 66.5
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 1.6e-56 223.0 151 67.5
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 3.7e-56 221.9 154 67.5
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 8.2e-56 220.7 154 67.5
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 1.1e-55 220.3 134 73.9
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.4e-55 219.9 154 67.5
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 1.4e-55 219.9 154 69.5
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 2.6e-54 215.7 164 65.2
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 2.2e-53 212.6 154 64.3
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 1.5e-49 199.9 149 65.1
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 2.5e-49 199.1 169 60.9
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 6.3e-48 194.5 149 61.1
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 4.1e-47 191.8 123 70.7
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 1.0e-45 187.2 133 67.7
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 2.2e-45 186.0 124 67.7
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 1.1e-44 183.7 120 68.3
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 4.2e-44 181.8 158 57.0
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 1.6e-43 179.9 179 54.7
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 2.7e-43 179.1 118 71.2
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 1.5e-41 173.3 149 59.7
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 6.3e-40 167.9 150 58.0
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 6.5e-37 157.9 162 52.5
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 1.1e-36 157.1 156 53.2
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 1.0e-34 150.6 102 70.6
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-32 142.1 92 70.7
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 5.9e-30 134.8 87 75.9
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 6.1e-27 124.8 121 54.5
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 1.7e-24 116.7 77 68.8
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 1.9e-20 103.2 57 80.7
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 8.8e-10 67.8 50 60.0
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 1.2e-09 67.4 43 69.8
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 2.8e-08 62.8 33 84.8
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 4.9e-08 62.0 33 78.8
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 1.1e-07 60.8 41 68.3
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 7.0e-07 58.2 32 75.0
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 9.2e-07 57.8 65 47.7


User provided reference genes

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