Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00384 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 2.6e-47 191.8 102 100.0
TAR629G1032 Trochodendron aralioides HOM05D005816 ORTHO05D006915 3.4e-23 111.7 110 56.4
COL.COLO4_22708 Corchorus olitorius HOM05D005816 ORTHO05D006915 9.2e-21 103.6 103 60.2
QL01p001040 Quercus lobata HOM05D005816 ORTHO05D006915 5.9e-20 100.9 118 46.6
VMungo0720G2795 Vigna mungo HOM05D005816 ORTHO05D006915 1.3e-19 99.8 107 50.5
Gohir.D07G042900 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.7e-19 99.4 96 53.1
Gohir.A07G038800 Gossypium hirsutum HOM05D005816 ORTHO05D006915 3.8e-19 98.2 97 52.6
Nn3g17700 Nelumbo nucifera HOM05D005816 ORTHO05D006915 3.8e-19 98.2 118 49.2
Phvul.007G101800 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 3.8e-19 98.2 111 46.8
CSS0007623 Camellia sinensis var. sinensis HOM05D005816 ORTHO05D006915 6.6e-19 97.4 103 50.5
Gorai.001G045900 Gossypium raimondii HOM05D005816 ORTHO05D006915 6.6e-19 97.4 96 52.1
HanXRQChr16g0528861 Helianthus annuus HOM05D005816 ORTHO05D006915 1.5e-18 96.3 102 49.0
Lalb_Chr21g0313371 Lupinus albus HOM05D005816 ORTHO05D006915 1.5e-18 96.3 112 46.4
Thecc.03G027700 Theobroma cacao HOM05D005816 ORTHO05D006915 1.5e-18 96.3 103 52.4
Ciclev10033717m.g Citrus clementina HOM05D005816 ORTHO05D006915 1.9e-18 95.9 126 47.6
Hma1.2p1_0862F.1_g229870 Hydrangea macrophylla HOM05D005816 ORTHO05D006915 2.5e-18 95.5 107 52.3
Glyma.10G205100 Glycine max HOM05D005816 ORTHO05D006915 4.3e-18 94.7 112 49.1
Duzib205G0672 Durio zibethinus HOM05D005816 ORTHO05D006915 2.1e-17 92.4 113 55.8
Lalb_Chr10g0099661 Lupinus albus HOM05D005816 ORTHO05D006915 3.6e-17 91.7 109 46.8
Atru.chr11.1371 Acer truncatum HOM05D005816 ORTHO05D006915 8.0e-17 90.5 127 45.7
TPR.G9813 Trifolium pratense HOM05D005816 ORTHO05D006915 1.0e-16 90.1 109 47.7
Aqoxy3G03898 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 1.4e-16 89.7 104 50.0
Glyma.20G185400 Glycine max HOM05D005816 ORTHO05D006915 1.4e-16 89.7 115 47.0
Lsat_1_v5_gn_4_19200 Lactuca sativa HOM05D005816 ORTHO05D006915 6.8e-16 87.4 107 44.9
Prupe.5G216700 Prunus persica HOM05D005816 ORTHO05D006915 8.9e-16 87.0 118 45.8
Lalb_Chr07g0178581 Lupinus albus HOM05D005816 ORTHO05D006915 2.6e-15 85.5 114 44.7
MD14G1221300 Malus domestica HOM05D005816 ORTHO05D006915 2.6e-15 85.5 117 45.3
MD06G1210600 Malus domestica HOM05D005816 ORTHO05D006915 4.4e-15 84.7 119 42.9
Manes.06G073000 Manihot esculenta HOM05D005816 ORTHO05D006915 4.4e-15 84.7 120 43.3
COL.COLO4_07860 Corchorus olitorius HOM05D005816 ORTHO05D006915 7.5e-15 84.0 111 45.0
Duzib251G0462 Durio zibethinus HOM05D005816 ORTHO05D006915 7.5e-15 84.0 113 46.0
Manes.05G118800 Manihot esculenta HOM05D005816 ORTHO05D006915 7.5e-15 84.0 107 43.9
Potri.010G130400 Populus trichocarpa HOM05D005816 ORTHO05D006915 7.5e-15 84.0 119 44.5
Oeu041876.1 Olea europaea HOM05D005816 ORTHO05D006915 2.2e-14 82.4 110 48.2
Medtr1g093800 Medicago truncatula HOM05D005816 ORTHO05D006915 3.7e-14 81.6 109 45.9
Nn4g23710 Nelumbo nucifera HOM05D005816 ORTHO05D006915 3.7e-14 81.6 119 43.7
PGR119G1376 Punica granatum HOM05D005816 ORTHO05D006915 3.7e-14 81.6 116 45.7
Phvul.003G177600 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 4.9e-14 81.3 112 50.0
Sabra08G0087500 Salix brachista HOM05D005816 ORTHO05D006915 4.9e-14 81.3 114 43.9
SalBow8G0077 Salvia bowleyana HOM05D005816 ORTHO05D006915 4.9e-14 81.3 111 45.9
HanXRQChr05g0149681 Helianthus annuus HOM05D005816 ORTHO05D006915 6.4e-14 80.9 105 42.9
CiPaw.16G083700 Carya illinoinensis HOM05D005816 ORTHO05D006915 8.3e-14 80.5 112 49.1
Duzib248G0754 Durio zibethinus HOM05D005816 ORTHO05D006915 8.3e-14 80.5 114 45.6
Gohir.A11G007200 Gossypium hirsutum HOM05D005816 ORTHO05D006915 8.3e-14 80.5 113 46.0
Gohir.D11G006300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 8.3e-14 80.5 113 46.0
Gorai.007G007600 Gossypium raimondii HOM05D005816 ORTHO05D006915 8.3e-14 80.5 111 45.0
AL2G27750 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 1.4e-13 79.7 114 41.2
AL2G33800 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 1.8e-13 79.3 107 47.7
Oeu044626.1 Olea europaea HOM05D005816 ORTHO05D006915 1.8e-13 79.3 105 46.7
Eucgr.G02356 Eucalyptus grandis HOM05D005816 ORTHO05D006915 2.4e-13 79.0 63 60.3
Glyma.17G121800 Glycine max HOM05D005816 ORTHO05D006915 2.4e-13 79.0 113 46.0
Manes.14G096700 Manihot esculenta HOM05D005816 ORTHO05D006915 2.4e-13 79.0 117 42.7
Carub.0002s1536 Capsella rubella HOM05D005816 ORTHO05D006915 3.2e-13 78.6 119 41.2
CiPaw.16G002600 Carya illinoinensis HOM05D005816 ORTHO05D006915 3.2e-13 78.6 116 41.4
Glyma.05G013600 Glycine max HOM05D005816 ORTHO05D006915 3.2e-13 78.6 118 47.5
Thecc.02G362100 Theobroma cacao HOM05D005816 ORTHO05D006915 4.1e-13 78.2 115 45.2
Gohir.D13G069300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 5.4e-13 77.8 118 45.8
PGR044G2006 Punica granatum HOM05D005816 ORTHO05D006915 7.0e-13 77.4 105 50.5
Gohir.D02G116175 Gossypium hirsutum HOM05D005816 ORTHO05D006915 9.2e-13 77.0 91 48.4
Gorai.013G079400 Gossypium raimondii HOM05D005816 ORTHO05D006915 1.2e-12 76.6 118 47.5
Atru.chr9.746 Acer truncatum HOM05D005816 ORTHO05D006915 1.6e-12 76.3 60 68.3
Potri.008G115600 Populus trichocarpa HOM05D005816 ORTHO05D006915 2.0e-12 75.9 120 44.2
MELO3C005357.2 Cucumis melo HOM05D005816 ORTHO05D006915 2.7e-12 75.5 120 40.0
AT1G73965 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 3.5e-12 75.1 107 43.9
Thhalv10019753m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 3.5e-12 75.1 105 45.7
BcaC08g46328 Brassica carinata HOM05D005816 ORTHO05D006915 4.6e-12 74.7 118 40.7
BolC6t39316H Brassica oleracea HOM05D005816 ORTHO05D006915 4.6e-12 74.7 118 40.7
Gohir.A13G071300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 4.6e-12 74.7 118 45.8
Sed0000064 Sechium edule HOM05D005816 ORTHO05D006915 6.0e-12 74.3 109 39.4
TPR.G26768 Trifolium pratense HOM05D005816 ORTHO05D006915 7.8e-12 73.9 120 41.7
AT1G68795 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 1.0e-11 73.6 112 40.2
Migut.E00293 Erythranthe guttata HOM05D005816 ORTHO05D006915 1.0e-11 73.6 70 57.1
QL10p023002 Quercus lobata HOM05D005816 ORTHO05D006915 1.0e-11 73.6 115 48.7
Carub.0002s2074 Capsella rubella HOM05D005816 ORTHO05D006915 1.3e-11 73.2 107 43.0
CARHR061620 Cardamine hirsuta HOM05D005816 ORTHO05D006915 1.3e-11 73.2 114 42.1
MBI16_g06255_MAGBIO Magnolia biondii HOM05D005816 ORTHO05D006915 1.3e-11 73.2 103 43.7
CARHR067080 Cardamine hirsuta HOM05D005816 ORTHO05D006915 1.7e-11 72.8 107 44.9
FAN07G2890 Fragaria x ananassa HOM05D005816 ORTHO05D006915 1.7e-11 72.8 62 56.5
FAN17G1568 Fragaria x ananassa HOM05D005816 ORTHO05D006915 1.7e-11 72.8 100 43.0
Psat4g043720 Pisum sativum HOM05D005816 ORTHO05D006915 1.7e-11 72.8 104 48.1
Dinv36900 Davidia involucrata HOM05D005816 ORTHO05D006915 2.3e-11 72.4 71 52.1
FvH4_4g28190 Fragaria vesca HOM05D005816 ORTHO05D006915 2.3e-11 72.4 100 42.0
FAN12G1213 Fragaria x ananassa HOM05D005816 ORTHO05D006915 2.3e-11 72.4 100 42.0
Gohir.A03G097050 Gossypium hirsutum HOM05D005816 ORTHO05D006915 2.3e-11 72.4 92 47.8
CiPaw.15G002700 Carya illinoinensis HOM05D005816 ORTHO05D006915 3.0e-11 72.0 128 38.3
CiPaw.15G126000 Carya illinoinensis HOM05D005816 ORTHO05D006915 3.0e-11 72.0 117 45.3
FvH4_5g12751 Fragaria vesca HOM05D005816 ORTHO05D006915 3.0e-11 72.0 106 48.1
FAN18G0325 Fragaria x ananassa HOM05D005816 ORTHO05D006915 3.0e-11 72.0 106 48.1
Lalb_Chr13g0302361 Lupinus albus HOM05D005816 ORTHO05D006915 3.0e-11 72.0 107 44.9
THA.LOC104821965 Tarenaya hassleriana HOM05D005816 ORTHO05D006915 3.0e-11 72.0 112 42.9
Lsat_1_v5_gn_3_58221 Lactuca sativa HOM05D005816 ORTHO05D006915 3.9e-11 71.6 104 44.2
Prupe.1G304500 Prunus persica HOM05D005816 ORTHO05D006915 3.9e-11 71.6 134 38.1
BcaB05g24412 Brassica carinata HOM05D005816 ORTHO05D006915 5.0e-11 71.2 116 39.7
Cc11_g10680 Coffea canephora HOM05D005816 ORTHO05D006915 5.0e-11 71.2 104 42.3
Migut.L01100 Erythranthe guttata HOM05D005816 ORTHO05D006915 5.0e-11 71.2 86 43.0
Thhalv10019343m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 5.0e-11 71.2 115 38.3
Oeu024099.1 Olea europaea HOM05D005816 ORTHO05D006915 5.0e-11 71.2 105 42.9
Lj4g0025770 Lotus japonicus HOM05D005816 ORTHO05D006915 8.6e-11 70.5 103 48.5
Lsat_1_v5_gn_4_112260 Lactuca sativa HOM05D005816 ORTHO05D006915 1.5e-10 69.7 75 50.7
A07p39820 Brassica napus HOM05D005816 ORTHO05D006915 1.9e-10 69.3 105 41.0
BraA07t31528Z Brassica rapa HOM05D005816 ORTHO05D006915 1.9e-10 69.3 105 41.0
Manes.01G021100 Manihot esculenta HOM05D005816 ORTHO05D006915 1.9e-10 69.3 59 54.2
Potri.012G059600 Populus trichocarpa HOM05D005816 ORTHO05D006915 1.9e-10 69.3 102 38.2
Solyc05g009915.1 Solanum lycopersicum HOM05D005816 ORTHO05D006915 1.9e-10 69.3 114 43.9
BcaB03g15849 Brassica carinata HOM05D005816 ORTHO05D006915 2.5e-10 68.9 118 36.4
Medtr8g076990 Medicago truncatula HOM05D005816 ORTHO05D006915 5.6e-10 67.8 70 51.4
VMungo1215G1388 Vigna mungo HOM05D005816 ORTHO05D006915 5.6e-10 67.8 108 50.0
Sp5g23900 Schrenkiella parvula HOM05D005816 ORTHO05D006915 7.3e-10 67.4 116 42.2
PGSC0003DMG400000830 Solanum tuberosum HOM05D005816 ORTHO05D006915 7.3e-10 67.4 112 45.5
Lj5g0018872 Lotus japonicus HOM05D005816 ORTHO05D006915 9.5e-10 67.0 99 42.4
Sp5g29165 Schrenkiella parvula HOM05D005816 ORTHO05D006915 9.5e-10 67.0 104 40.4
BcaC08g46825 Brassica carinata HOM05D005816 ORTHO05D006915 1.2e-09 66.6 104 38.5
RcHm_v2.0_Chr4g0435951 Rosa chinensis HOM05D005816 ORTHO05D006915 1.6e-09 66.2 104 36.5
Sopen03g038660 Solanum pennellii HOM05D005816 ORTHO05D006915 2.1e-09 65.9 95 40.0
PGSC0003DMG400005703 Solanum tuberosum HOM05D005816 ORTHO05D006915 3.6e-09 65.1 95 42.1
Cpa.g.sc13.61 Carica papaya HOM05D005816 ORTHO05D006915 4.7e-09 64.7 57 63.2
ClCG01G005730 Citrullus lanatus HOM05D005816 ORTHO05D006915 4.7e-09 64.7 106 37.7
Sopen05g005720 Solanum pennellii HOM05D005816 ORTHO05D006915 8.0e-09 63.9 73 49.3
C06p48080 Brassica napus HOM05D005816 ORTHO05D006915 1.1e-08 63.5 104 40.4
BolC6t39843H Brassica oleracea HOM05D005816 ORTHO05D006915 1.1e-08 63.5 104 39.4
Aa31sc79G90 Aethionema arabicum HOM05D005816 ORTHO05D006915 5.2e-08 61.2 101 38.6
Eucgr.B00694 Eucalyptus grandis HOM05D005816 ORTHO05D006915 1.2e-07 60.1 89 50.6
Sc11g0003040 Simmondsia chinensis HOM05D005816 ORTHO05D006915 1.2e-07 60.1 113 40.7
HanXRQChr16g0502081 Helianthus annuus HOM05D005816 ORTHO05D006915 1.5e-07 59.7 50 64.0
Aa31LG4G4260 Aethionema arabicum HOM05D005816 ORTHO05D006915 2.6e-07 58.9 59 52.5
BcaC03g14990 Brassica carinata HOM05D005816 ORTHO05D006915 3.4e-07 58.5 116 32.8
Sed0012991 Sechium edule HOM05D005816 ORTHO05D006915 5.8e-07 57.8 76 55.3
MELO3C017284.2 Cucumis melo HOM05D005816 ORTHO05D006915 9.8e-07 57.0 104 45.2
Carub.0001s3819 Capsella rubella HOM05D012335 ORTHO05D014421 8.3e-06 53.9 97 30.9
SGA_v2.0_scaffold59G20629 Striga asiatica HOM05D005816 ORTHO05D006915 8.3e-06 53.9 63 44.4


User provided reference genes

Program Settings