Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00375 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 5.4e-158 560.8 264 100.0
Aqoxy3G00361 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 1.0e-76 290.8 264 58.0
Aqoxy5G00659 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 1.9e-57 226.9 275 45.8
Aqoxy3G00376 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 4.6e-56 222.2 248 49.2
TAR371G0827 Trochodendron aralioides HOM05D002420 ORTHO05D002422 1.8e-44 183.7 232 45.3
Dinv38297 Davidia involucrata HOM05D004446 ORTHO05D005346 3.5e-40 169.5 269 37.9
CSS0028398 Camellia sinensis var. sinensis HOM05D002420 ORTHO05D002422 1.3e-37 161.0 270 37.4
CSS0031967 Camellia sinensis var. sinensis HOM05D002420 ORTHO05D002422 1.3e-37 161.0 270 37.4
Nn4g25094 Nelumbo nucifera HOM05D002420 ORTHO05D002422 6.2e-37 158.7 233 41.6
Atru.chr9.129 Acer truncatum HOM05D002420 ORTHO05D002422 1.1e-36 157.9 275 35.3
Rhsim10G0188800 Rhododendron simsii HOM05D002420 ORTHO05D002422 1.4e-36 157.5 269 35.7
Actinidia35149 Actinidia chinensis HOM05D002420 ORTHO05D002422 9.0e-36 154.8 278 34.9
vmacro20419 Vaccinium macrocarpon HOM05D002420 ORTHO05D002422 1.2e-35 154.5 269 35.7
Manes.05G199200 Manihot esculenta HOM05D002420 ORTHO05D002422 4.5e-35 152.5 272 34.6
QL93p0073_1187 Quercus lobata HOM05D002420 ORTHO05D002422 2.2e-34 150.2 269 33.8
Ciclev10020526m.g Citrus clementina HOM05D002420 ORTHO05D002422 2.9e-34 149.8 231 36.8
QL05p077107 Quercus lobata HOM05D002420 ORTHO05D002422 2.9e-34 149.8 269 34.2
GSVIVG01026445001 Vitis vinifera HOM05D002420 ORTHO05D002422 1.4e-33 147.5 270 34.8
PGSC0003DMG400010178 Solanum tuberosum HOM05D002420 ORTHO05D002422 1.9e-33 147.1 228 37.3
Thecc.09G282200 Theobroma cacao HOM05D002420 ORTHO05D002422 1.9e-33 147.1 272 33.8
COL.COLO4_19852 Corchorus olitorius HOM05D002420 ORTHO05D002422 2.4e-33 146.7 272 35.7
Sopen03g029280 Solanum pennellii HOM05D002420 ORTHO05D002422 5.4e-33 145.6 231 35.9
Duzib168G0815 Durio zibethinus HOM05D002420 ORTHO05D002422 7.1e-33 145.2 271 34.3
Cpa.g.sc42.22 Carica papaya HOM05D002420 ORTHO05D002422 1.2e-32 144.4 269 35.3
DCAR_014748 Daucus carota HOM05D002420 ORTHO05D002422 4.6e-32 142.5 271 33.9
Lalb_Chr05g0225771 Lupinus albus HOM05D002420 ORTHO05D002422 6.0e-32 142.1 231 35.5
Lalb_Chr16g0386521 Lupinus albus HOM05D002420 ORTHO05D002422 7.9e-32 141.7 265 34.3
Solyc03g098570.1 Solanum lycopersicum HOM05D002420 ORTHO05D002422 1.0e-31 141.4 226 36.7
COL.COLO4_11599 Corchorus olitorius HOM05D002420 ORTHO05D002422 1.3e-31 141.0 274 34.7
Cc04_g08540 Coffea canephora HOM05D002420 ORTHO05D002422 2.3e-31 140.2 271 35.4
PSO063G5348 Papaver somniferum HOM05D002420 ORTHO05D002422 3.0e-31 139.8 257 35.0
Nitab4.5_0003040g0190 Nicotiana tabacum HOM05D000001 ORTHO05D010224 5.1e-31 139.0 274 31.4
CAN.G929.25 Capsicum annuum HOM05D002420 ORTHO05D002422 6.6e-31 138.7 226 36.7
Gorai.006G112200 Gossypium raimondii HOM05D000001 ORTHO05D010224 1.1e-30 137.9 230 35.2
CANSAT01G0107 Cannabis sativa HOM05D002420 ORTHO05D002422 1.9e-30 137.1 276 33.7
Gohir.D09G095500 Gossypium hirsutum HOM05D000001 ORTHO05D010224 1.9e-30 137.1 230 35.2
PSO782G2286 Papaver somniferum HOM05D002420 ORTHO05D002422 2.5e-30 136.7 257 34.2
Gohir.A09G095800 Gossypium hirsutum HOM05D000001 ORTHO05D010224 5.6e-30 135.6 230 35.2
Nitab4.5_0000782g0110 Nicotiana tabacum HOM05D002420 ORTHO05D002422 7.4e-30 135.2 230 35.7
Aqoxy5G00664 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 9.6e-30 134.8 251 37.8
Sabra15G0023700 Salix brachista HOM05D002420 ORTHO05D002422 1.3e-29 134.4 270 33.0
Migut.M00586 Erythranthe guttata HOM05D002420 ORTHO05D002422 6.2e-29 132.1 269 30.5
Migut.O00341 Erythranthe guttata HOM05D002420 ORTHO05D002422 6.2e-29 132.1 269 30.5
Lj4g0009025 Lotus japonicus HOM05D002420 ORTHO05D002422 6.2e-29 132.1 273 31.5
arahy.Tifrunner.gnm1.ann1.D2CQLD Arachis hypogaea HOM05D002420 ORTHO05D002422 6.9e-28 128.6 195 35.9
Oeu038400.1 Olea europaea HOM05D002420 ORTHO05D002422 9.0e-28 128.3 275 32.4
Potri.015G028500 Populus trichocarpa HOM05D002420 ORTHO05D002422 1.2e-27 127.9 270 31.5
SGA_v2.0_scaffold90G27757 Striga asiatica HOM05D002420 ORTHO05D002422 1.5e-27 127.5 238 34.5
Migut.O00261 Erythranthe guttata HOM05D002420 ORTHO05D002422 2.0e-27 127.1 232 31.5
Sed0018683 Sechium edule HOM05D002420 ORTHO05D002422 2.6e-27 126.7 270 32.6
ClCG06G012330 Citrullus lanatus HOM05D000759 ORTHO05D000574 4.5e-27 125.9 271 33.9
arahy.Tifrunner.gnm1.ann1.TS9750 Arachis hypogaea HOM05D002420 ORTHO05D002422 7.6e-27 125.2 195 34.9
Peaxi162Scf00171g00214 Petunia axillaris HOM05D002420 ORTHO05D002422 2.2e-26 123.6 271 31.4
CsaV3_1G024340 Cucumis sativus L. HOM05D002420 ORTHO05D002422 4.9e-26 122.5 272 33.5
CsaV3_1G028850 Cucumis sativus L. HOM05D002420 ORTHO05D002422 1.1e-25 121.3 235 35.3
Medtr4g134390 Medicago truncatula HOM05D002420 ORTHO05D002422 2.4e-25 120.2 161 38.5
Psat4g001840 Pisum sativum HOM05D002420 ORTHO05D002422 3.2e-25 119.8 200 34.0
Ca_22427_v3 Cicer arietinum L. HOM05D002420 ORTHO05D002422 4.2e-25 119.4 192 34.4
MELO3C010232.2 Cucumis melo HOM05D002420 ORTHO05D002422 4.2e-25 119.4 271 32.1
EL10Ac8g18839 Beta vulgaris HOM05D002420 ORTHO05D002422 5.5e-25 119.0 255 31.8
SalBow5G1081 Salvia bowleyana HOM05D002420 ORTHO05D002422 3.5e-24 116.3 249 32.9
TPR.G5959 Trifolium pratense HOM05D002420 ORTHO05D002422 3.5e-24 116.3 224 32.1
Phvul.002G082800 Phaseolus vulgaris HOM05D002420 ORTHO05D002422 3.0e-23 113.2 236 31.4
DCAR_015611 Daucus carota HOM05D002420 ORTHO05D002422 6.7e-23 112.1 272 30.9
Glyma.01G083900 Glycine max HOM05D002420 ORTHO05D002422 8.7e-23 111.7 197 31.0
AUR62040762 Chenopodium quinoa HOM05D002420 ORTHO05D002422 1.5e-22 110.9 234 29.9
Ah.09g231660 Amaranthus hybridus HOM05D002420 ORTHO05D002422 1.6e-21 107.5 249 31.3
AUR62033031 Chenopodium quinoa HOM05D002420 ORTHO05D002422 6.2e-21 105.5 233 29.2
Lj2g0005175 Lotus japonicus HOM05D002420 ORTHO05D002422 1.1e-20 104.8 246 28.5
Glyma.08G259900 Glycine max HOM05D002420 ORTHO05D002422 5.3e-20 102.4 192 29.2
Aqoxy5G00669 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 5.8e-19 99.0 144 43.8
QL04p013493 Quercus lobata HOM05D002420 ORTHO05D002422 2.9e-18 96.7 221 31.2
Aqoxy3G00828 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 3.8e-18 96.3 131 43.5
Aqoxy4G01072 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 4.9e-18 95.9 274 31.4
QL04p013515 Quercus lobata HOM05D002420 ORTHO05D002422 1.1e-17 94.7 221 30.3
QL04p012655 Quercus lobata HOM05D002420 ORTHO05D002422 1.4e-17 94.4 191 33.0
QL04p012671 Quercus lobata HOM05D002420 ORTHO05D002422 1.4e-17 94.4 221 30.3
QL04p012695 Quercus lobata HOM05D002420 ORTHO05D002422 1.4e-17 94.4 221 30.3
QL04p012751 Quercus lobata HOM05D002420 ORTHO05D002422 1.4e-17 94.4 193 31.1
QL04p013429 Quercus lobata HOM05D002420 ORTHO05D002422 1.9e-17 94.0 193 30.6
TPR.G18684 Trifolium pratense HOM05D002420 ORTHO05D002422 5.5e-17 92.4 192 31.2
QL04p013554 Quercus lobata HOM05D002420 ORTHO05D002422 3.5e-16 89.7 191 31.4
QL04p012713 Quercus lobata HOM05D002420 ORTHO05D002422 4.6e-16 89.4 225 29.8
QL04p013477 Quercus lobata HOM05D002420 ORTHO05D002422 4.6e-16 89.4 225 29.8
Aqoxy3G01316 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 1.8e-15 87.4 198 31.3
QL04p013526 Quercus lobata HOM05D002420 ORTHO05D002422 3.9e-15 86.3 191 30.4
QL08p055477 Quercus lobata HOM05D002420 ORTHO05D002422 1.9e-14 84.0 144 34.7
Aqoxy4G02350 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 2.5e-14 83.6 118 39.8
QL08p054586 Quercus lobata HOM05D002420 ORTHO05D002422 2.5e-14 83.6 144 34.7
QL08p054647 Quercus lobata HOM05D002420 ORTHO05D002422 2.5e-14 83.6 144 34.7
QL08p054650 Quercus lobata HOM05D002420 ORTHO05D002422 2.5e-14 83.6 144 34.7
QL08p055137 Quercus lobata HOM05D002420 ORTHO05D002422 2.5e-14 83.6 144 34.7
Sabra14G0057400 Salix brachista HOM05D002420 ORTHO05D002422 4.3e-14 82.8 206 29.1
arahy.Tifrunner.gnm1.ann1.6LG1IJ Arachis hypogaea HOM05D002420 ORTHO05D002422 1.3e-13 81.3 217 30.4
QL04p019597 Quercus lobata HOM05D002420 ORTHO05D002422 1.6e-13 80.9 149 32.9
QL04p020660 Quercus lobata HOM05D002420 ORTHO05D002422 2.8e-13 80.1 152 32.9
QL04p020224 Quercus lobata HOM05D002420 ORTHO05D002422 1.1e-12 78.2 146 33.6
QL04p020508 Quercus lobata HOM05D002420 ORTHO05D002422 1.4e-12 77.8 146 32.9
QL04p019991 Quercus lobata HOM05D002420 ORTHO05D002422 1.8e-12 77.4 149 32.2
QL04p012624 Quercus lobata HOM05D002420 ORTHO05D002422 3.1e-12 76.6 160 29.4
arahy.Tifrunner.gnm1.ann1.XHBX5X Arachis hypogaea HOM05D002420 ORTHO05D002422 4.1e-12 76.3 198 31.3
Aqoxy2G02259 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 5.3e-12 75.9 148 34.5
Aqoxy59s001 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 5.3e-12 75.9 148 34.5
Aqoxy2G00892 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 2.2e-10 70.5 94 41.5
QL04p019734 Quercus lobata HOM05D002420 ORTHO05D002422 6.5e-10 68.9 149 31.5
Solyc03g098580.1 Solanum lycopersicum HOM05D000001 ORTHO05D010224 7.2e-09 65.5 117 32.5
COL.COLO4_27501 Corchorus olitorius HOM05D002420 ORTHO05D002422 1.0e-07 61.6 96 37.5
CANSAT56G1457 Cannabis sativa HOM05D000664 ORTHO05D000491 8.7e-07 58.5 226 27.0
TAR629G0425 Trochodendron aralioides HOM05D002420 ORTHO05D002422 2.5e-06 57.0 158 29.7
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 3.3e-06 56.6 148 27.7
Manes.02G092400 Manihot esculenta HOM05D002420 ORTHO05D002422 4.3e-06 56.2 141 30.5


User provided reference genes

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