Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 1.2e-202 709.5 347 100.0
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 3.4e-115 419.1 263 75.3
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 1.4e-113 413.7 356 60.1
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 1.8e-113 413.3 326 62.3
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 2.4e-113 412.9 335 61.8
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 9.1e-113 411.0 265 72.1
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 2.7e-112 409.5 284 68.3
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.0e-111 407.5 279 70.3
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 1.0e-111 407.5 280 70.0
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 1.3e-111 407.1 245 78.8
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 2.9e-111 406.0 285 69.5
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 3.8e-111 405.6 256 73.8
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 5.0e-111 405.2 274 69.7
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 5.0e-111 405.2 257 75.9
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 6.5e-111 404.8 251 76.5
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 8.5e-111 404.4 252 74.2
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 5.5e-110 401.7 259 73.0
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 7.2e-110 401.4 292 67.1
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 7.2e-110 401.4 288 67.0
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 1.6e-109 400.2 327 61.8
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 2.1e-109 399.8 322 60.9
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 6.1e-109 398.3 257 73.2
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 6.1e-109 398.3 254 71.7
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 1.8e-108 396.7 256 70.7
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 3.0e-108 396.0 280 68.6
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 5.2e-108 395.2 246 73.2
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 5.2e-108 395.2 257 70.4
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 1.2e-107 394.0 256 71.9
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.2e-107 394.0 256 70.3
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 1.5e-107 393.7 287 66.9
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 1.5e-107 393.7 349 58.5
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 2.0e-107 393.3 255 70.2
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 4.4e-107 392.1 337 59.6
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 5.7e-107 391.7 255 71.0
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 7.5e-107 391.3 335 60.6
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 9.8e-107 391.0 283 67.1
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 1.3e-106 390.6 245 73.1
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.7e-106 390.2 329 60.8
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.7e-106 390.2 283 67.1
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.7e-106 390.2 283 67.1
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 2.8e-106 389.4 248 73.4
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 4.8e-106 388.7 284 64.8
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 1.1e-105 387.5 280 65.7
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 1.1e-105 387.5 280 65.7
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 1.1e-105 387.5 280 65.7
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 1.1e-105 387.5 289 65.1
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 1.1e-105 387.5 285 64.9
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 2.4e-105 386.3 280 65.0
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 3.1e-105 386.0 283 66.8
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 4.1e-105 385.6 343 55.7
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.1e-105 385.6 283 66.4
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 4.1e-105 385.6 280 66.4
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 7.0e-105 384.8 288 64.6
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 3.5e-104 382.5 267 69.3
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 4.5e-104 382.1 275 67.6
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 7.7e-104 381.3 257 69.6
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 1.0e-103 380.9 257 69.6
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 1.0e-103 380.9 329 58.1
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 2.9e-103 379.4 257 69.3
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 3.8e-103 379.0 309 60.5
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 6.6e-103 378.3 251 70.1
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 6.6e-103 378.3 352 55.1
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 5.5e-102 375.2 255 68.6
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 9.5e-102 374.4 251 69.7
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 3.6e-101 372.5 258 68.2
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 1.4e-100 370.5 272 65.1
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 4.0e-100 369.0 258 67.1
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 5.2e-100 368.6 280 62.5
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 6.8e-100 368.2 223 75.8
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 1.5e-99 367.1 246 68.7
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 2.6e-99 366.3 256 68.8
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 4.4e-99 365.5 334 54.5
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 5.7e-99 365.2 224 75.4
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 1.7e-98 363.6 226 76.1
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 1.7e-98 363.6 375 50.7
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 4.9e-98 362.1 249 68.3
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 4.5e-96 355.5 250 66.0
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 1.0e-95 354.4 259 64.9
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 2.9e-95 352.8 246 63.8
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 1.7e-87 327.0 285 56.5
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 2.9e-82 309.7 256 58.6
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 3.7e-82 309.3 294 53.7
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 4.1e-81 305.8 279 54.8
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.6e-80 303.9 190 74.7
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 1.1e-78 297.7 207 68.1
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 1.5e-78 297.4 333 49.2
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 1.9e-78 297.0 277 53.1
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.8e-76 290.4 183 73.2
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 1.8e-76 290.4 227 58.6
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 5.2e-76 288.9 229 61.6
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 5.2e-76 288.9 229 61.6
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 5.2e-76 288.9 183 73.8
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 5.4e-73 278.9 262 51.1
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.2e-72 277.7 194 68.6
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 7.8e-72 275.0 193 66.3
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 1.3e-71 274.2 251 50.2
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 6.6e-71 271.9 180 72.8
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 1.6e-69 267.3 251 56.6
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 2.4e-68 263.5 164 73.2
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 5.6e-62 242.3 169 67.5
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 5.4e-57 225.7 219 48.9
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 3.3e-54 216.5 191 58.6
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.4e-52 210.3 279 44.4
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.4e-52 210.3 279 44.4
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 6.4e-50 202.2 178 57.9
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 4.6e-48 196.1 144 63.9
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 8.4e-42 175.3 127 64.6
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 1.6e-40 171.0 248 38.3
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.7e-40 170.2 127 63.0
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 6.5e-34 149.1 127 59.1
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 6.3e-29 132.5 104 57.7
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 4.1e-28 129.8 92 65.2
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 3.4e-27 126.7 277 36.1
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 6.1e-24 115.9 233 34.3
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 1.7e-18 97.8 311 26.7
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 5.0e-18 96.3 63 73.0
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 8.5e-18 95.5 62 66.1
AUR62040742 Chenopodium quinoa HOM05D006863 ORTHO05D137998 4.4e-06 56.6 48 58.3


User provided reference genes

Program Settings