Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 6.1e-106 387.5 196 100.0
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 5.4e-54 214.9 163 66.9
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 7.8e-53 211.1 192 59.9
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 3.9e-52 208.8 197 60.4
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 2.8e-50 202.6 197 58.9
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 1.8e-49 199.9 204 57.4
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 4.0e-49 198.7 198 58.6
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 1.2e-48 197.2 203 56.7
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 5.8e-48 194.9 192 58.3
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 6.4e-47 191.4 192 58.9
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 2.4e-46 189.5 197 55.8
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 1.2e-45 187.2 161 62.1
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 2.1e-45 186.4 163 62.6
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 2.7e-45 186.0 196 56.6
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 4.6e-45 185.3 170 61.8
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 7.8e-45 184.5 196 56.6
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 7.8e-45 184.5 154 63.6
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 1.0e-44 184.1 177 62.7
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 1.0e-44 184.1 171 59.1
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.3e-44 183.7 199 53.8
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 3.0e-44 182.6 175 54.9
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 3.0e-44 182.6 205 53.7
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 3.9e-44 182.2 149 65.1
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 3.9e-44 182.2 185 57.8
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 3.9e-44 182.2 185 57.8
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 3.9e-44 182.2 197 55.8
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.1e-44 181.8 199 53.3
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 6.6e-44 181.4 162 61.1
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 8.7e-44 181.0 194 55.2
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 1.1e-43 180.6 198 53.5
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 1.5e-43 180.3 189 54.5
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 4.3e-43 178.7 204 51.5
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 5.6e-43 178.3 196 56.1
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 9.6e-43 177.6 185 57.3
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 9.6e-43 177.6 196 55.6
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.3e-42 177.2 185 56.2
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 3.6e-42 175.6 166 60.2
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 3.6e-42 175.6 189 55.6
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 3.6e-42 175.6 159 61.0
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 3.6e-42 175.6 162 59.3
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 8.1e-42 174.5 163 57.1
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 2.4e-41 172.9 162 61.1
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 2.4e-41 172.9 199 50.3
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.4e-41 172.9 199 50.3
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 3.1e-41 172.6 204 51.5
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 4.0e-41 172.2 205 50.2
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 5.3e-41 171.8 205 54.1
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 5.3e-41 171.8 205 54.1
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 9.0e-41 171.0 138 63.8
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 1.2e-40 170.6 163 60.1
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 1.5e-40 170.2 205 53.7
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 4.5e-40 168.7 194 54.1
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 9.9e-40 167.5 155 58.1
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 9.9e-40 167.5 201 51.2
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 2.2e-39 166.4 200 53.0
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 2.2e-39 166.4 203 49.3
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 2.9e-39 166.0 164 60.4
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 3.8e-39 165.6 165 54.5
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 4.9e-39 165.2 202 50.0
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 6.4e-39 164.9 203 49.3
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 8.4e-39 164.5 173 54.9
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 3.2e-38 162.5 153 59.5
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 3.2e-38 162.5 100 76.0
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 4.2e-38 162.2 165 58.2
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 7.1e-38 161.4 208 47.6
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 9.3e-38 161.0 203 49.8
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 2.1e-37 159.8 179 54.2
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 2.7e-37 159.5 175 54.3
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 6.0e-37 158.3 176 50.6
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 1.0e-36 157.5 163 57.1
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 2.3e-36 156.4 196 50.0
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 3.9e-36 155.6 159 55.3
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 3.9e-36 155.6 201 48.8
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 2.1e-34 149.8 253 41.9
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 2.1e-34 149.8 170 52.9
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 2.8e-34 149.4 234 44.0
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 4.8e-34 148.7 179 51.4
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 6.2e-34 148.3 205 46.8
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 6.2e-34 148.3 205 46.8
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 6.2e-34 148.3 205 46.8
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 8.1e-34 147.9 205 47.3
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 1.4e-33 147.1 205 46.8
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 1.4e-33 147.1 217 44.2
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 5.3e-33 145.2 205 46.3
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 6.9e-33 144.8 185 51.4
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 9.0e-33 144.4 176 50.0
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 1.2e-32 144.1 180 48.9
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 2.0e-32 143.3 203 47.3
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 1.7e-31 140.2 206 47.1
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 2.2e-31 139.8 180 50.6
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 3.2e-30 136.0 204 45.1
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 3.2e-30 136.0 204 45.1
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 3.2e-30 136.0 208 45.2
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 3.2e-30 136.0 94 70.2
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 7.1e-30 134.8 160 50.6
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 1.6e-29 133.7 200 45.5
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 2.1e-29 133.3 199 45.7
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 2.7e-29 132.9 105 66.7
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 2.7e-29 132.9 105 66.7
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 2.7e-29 132.9 105 66.7
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 7.9e-29 131.3 175 49.7
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 2.3e-28 129.8 200 45.0
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 6.7e-28 128.3 118 53.4
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 1.1e-27 127.5 138 52.2
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 1.9e-27 126.7 191 45.0
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 9.6e-27 124.4 159 50.9
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 2.1e-26 123.2 131 55.0
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 2.4e-25 119.8 164 45.1
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 6.9e-25 118.2 185 45.4
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 9.0e-25 117.9 95 60.0
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 3.8e-23 112.5 162 42.6
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 1.6e-21 107.1 86 58.1
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 6.0e-21 105.1 91 56.0
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 6.0e-21 105.1 91 56.0
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 6.7e-20 101.7 190 40.0
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 1.5e-19 100.5 161 41.6
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.9e-19 100.1 126 50.0
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 2.5e-19 99.8 198 39.9
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.1e-14 84.3 67 70.1
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 1.4e-14 84.0 114 41.2
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 2.1e-13 80.1 87 46.0
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 2.1e-13 80.1 87 46.0
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 4.6e-13 79.0 42 78.6
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 1.4e-12 77.4 106 47.2
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 1.0e-07 61.2 92 38.0
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 6.5e-07 58.5 190 30.5
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 8.5e-07 58.2 65 53.8
A05p27070 Brassica napus HOM05D005829 ORTHO05D007246 2.5e-06 56.6 46 63.0
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 5.5e-06 55.5 36 63.9


User provided reference genes

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