Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 8.5e-207 723.4 356 100.0
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 1.0e-143 513.8 350 70.9
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 5.6e-134 481.5 336 70.2
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 9.6e-134 480.7 349 68.2
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 2.1e-133 479.6 363 65.6
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 4.5e-131 471.9 324 70.4
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 4.5e-131 471.9 338 67.8
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 1.7e-130 469.9 352 66.8
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 3.8e-130 468.8 322 70.2
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 4.9e-130 468.4 335 68.1
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 6.5e-130 468.0 363 65.8
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 6.5e-130 468.0 334 69.5
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 8.4e-130 467.6 315 72.1
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.1e-129 467.2 349 66.5
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 1.4e-129 466.8 321 69.5
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 2.5e-129 466.1 318 70.8
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 2.5e-129 466.1 336 68.2
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 2.5e-129 466.1 352 64.8
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 5.5e-129 464.9 322 68.6
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 2.1e-128 463.0 332 67.8
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 1.8e-127 459.9 321 70.1
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 2.3e-127 459.5 321 70.1
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 2.3e-127 459.5 321 69.2
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 5.1e-127 458.4 335 65.7
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 5.1e-127 458.4 338 66.0
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 8.7e-127 457.6 347 64.6
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 1.1e-126 457.2 335 65.4
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.5e-126 456.8 335 65.1
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 1.5e-126 456.8 350 63.4
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.9e-126 456.4 361 64.8
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 3.3e-126 455.7 319 70.2
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 5.7e-126 454.9 341 68.6
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 7.4e-126 454.5 324 68.2
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 7.4e-126 454.5 345 64.9
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 1.3e-125 453.8 317 68.5
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 2.8e-125 452.6 331 66.2
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 8.2e-125 451.1 315 67.9
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 3.1e-124 449.1 309 70.6
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 4.1e-124 448.7 328 67.1
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 4.1e-124 448.7 328 67.1
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 4.1e-124 448.7 310 71.6
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 5.3e-124 448.4 351 63.5
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 5.3e-124 448.4 349 64.5
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 6.9e-124 448.0 330 67.3
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 9.0e-124 447.6 332 69.0
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 1.2e-123 447.2 352 64.5
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 1.5e-123 446.8 317 69.4
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 4.5e-123 445.3 363 62.5
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.3e-122 443.7 316 67.7
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 3.8e-122 442.2 314 68.5
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 3.8e-122 442.2 313 66.8
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 3.2e-121 439.1 314 66.9
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 7.2e-121 438.0 328 67.4
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 1.2e-120 437.2 361 62.9
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.6e-120 436.8 323 66.6
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 3.5e-120 435.6 354 61.9
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 4.6e-120 435.3 338 64.2
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 5.1e-119 431.8 323 64.4
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 5.7e-118 428.3 323 65.6
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 9.7e-118 427.6 326 63.5
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.6e-117 426.8 318 65.7
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 2.8e-117 426.0 319 66.5
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 6.9e-116 421.4 315 64.4
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 9.0e-116 421.0 315 64.4
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.2e-115 420.6 323 63.8
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.2e-115 420.6 323 63.8
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.7e-114 416.8 309 66.7
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.7e-114 416.8 313 62.6
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 5.0e-114 415.2 322 62.7
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 6.5e-114 414.8 320 66.6
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 8.5e-114 414.5 322 62.7
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 4.2e-113 412.1 322 62.1
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 4.6e-112 408.7 327 61.8
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 9.7e-110 401.0 380 56.8
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 2.4e-108 396.4 344 59.0
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 2.6e-107 392.9 306 63.7
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 4.5e-107 392.1 294 64.6
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 7.2e-105 384.8 280 65.7
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 4.7e-104 382.1 302 63.2
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 2.0e-99 366.7 292 64.7
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 5.5e-97 358.6 325 57.8
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 1.1e-94 350.9 309 58.6
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 9.7e-94 347.8 320 55.9
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 1.5e-89 334.0 243 66.3
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 1.9e-89 333.6 348 49.4
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 2.7e-88 329.7 245 66.9
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 8.0e-88 328.2 222 72.5
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.2e-83 314.3 309 55.7
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 5.9e-83 312.0 313 51.1
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 1.2e-78 297.7 306 46.7
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.0e-78 297.0 326 48.5
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 3.7e-77 292.7 202 66.3
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 4.1e-76 289.3 206 67.5
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.8e-72 276.6 325 47.7
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 2.6e-70 270.0 226 57.5
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 1.0e-63 248.1 356 37.1
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 1.2e-62 244.6 199 58.8
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 3.5e-59 233.0 305 40.7
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 2.1e-56 223.8 173 67.6
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 6.4e-53 212.2 258 42.6
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.7e-50 204.1 317 39.4
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 6.0e-43 179.1 200 49.5
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 2.6e-38 163.7 198 48.0
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 9.9e-38 161.8 158 53.8
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 6.2e-32 142.5 90 73.3
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.1e-31 141.7 86 76.7
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 1.1e-31 141.7 102 69.6
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.8e-31 141.0 112 58.9
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 1.5e-30 137.9 345 30.7
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 4.5e-30 136.3 96 64.6
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 6.0e-27 125.9 91 69.2
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 1.8e-26 124.4 106 58.5
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 6.9e-23 112.5 280 27.9
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 4.5e-22 109.8 99 52.5
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.4e-07 61.6 71 46.5
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 6.9e-07 59.3 30 80.0


User provided reference genes

Program Settings