Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 1.2e-92 343.6 228 100.0
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 3.3e-34 149.4 246 46.3
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.4e-29 134.0 242 42.1
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 9.2e-29 131.3 247 43.7
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 1.6e-28 130.6 246 42.7
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 1.6e-28 130.6 246 42.7
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 5.9e-28 128.6 245 41.2
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 1.3e-27 127.5 231 42.0
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 2.3e-27 126.7 237 43.5
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 3.9e-27 125.9 231 43.3
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 1.9e-26 123.6 247 47.4
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 5.6e-26 122.1 246 45.9
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 5.6e-26 122.1 248 39.5
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 7.3e-26 121.7 246 41.5
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 7.3e-26 121.7 245 40.8
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.6e-25 120.6 220 42.7
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 2.8e-25 119.8 221 43.4
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 4.7e-25 119.0 244 41.4
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 1.8e-24 117.1 248 38.7
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 6.8e-24 115.2 225 41.3
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 5.8e-23 112.1 230 41.3
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 7.5e-23 111.7 251 39.0
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 2.2e-22 110.2 228 42.5
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 2.9e-22 109.8 245 37.1
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 3.7e-22 109.4 230 40.0
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 4.9e-22 109.0 221 42.1
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 4.9e-22 109.0 221 42.1
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 4.9e-22 109.0 221 42.1
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 4.9e-22 109.0 228 39.9
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 6.4e-22 108.6 219 42.0
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 1.1e-21 107.8 230 40.4
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 1.4e-21 107.5 233 38.6
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 2.4e-21 106.7 194 43.8
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 7.0e-21 105.1 232 39.7
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 9.2e-21 104.8 225 40.9
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 1.2e-20 104.4 233 37.3
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 1.6e-20 104.0 208 43.8
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 2.0e-20 103.6 261 36.4
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 2.7e-20 103.2 194 42.3
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 4.6e-20 102.4 225 40.4
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 6.0e-20 102.1 233 37.8
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 1.0e-19 101.3 238 38.2
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 1.3e-19 100.9 236 36.9
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 1.3e-19 100.9 226 40.3
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 2.3e-19 100.1 233 36.9
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 8.6e-19 98.2 254 48.4
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 1.1e-18 97.8 223 37.7
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 1.1e-18 97.8 195 43.1
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 1.1e-18 97.8 253 47.8
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 5.6e-18 95.5 221 36.7
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 7.3e-18 95.1 242 35.5
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 1.6e-17 94.0 230 38.3
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 2.1e-17 93.6 242 39.3
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 2.1e-17 93.6 239 35.1
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 4.7e-17 92.4 250 36.8
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 1.1e-16 91.3 200 39.5
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 1.4e-16 90.9 233 34.3
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.4e-16 90.9 220 40.0
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 1.4e-16 90.9 245 35.1
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 2.3e-16 90.1 121 51.2
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 4.0e-16 89.4 228 36.0
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 5.2e-16 89.0 234 37.2
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 5.2e-16 89.0 233 37.8
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 6.8e-16 88.6 201 38.8
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 6.8e-16 88.6 226 38.9
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 6.8e-16 88.6 129 51.9
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 6.8e-16 88.6 244 34.4
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 8.9e-16 88.2 196 37.2
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 1.5e-15 87.4 225 35.6
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 2.6e-15 86.7 231 38.1
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.6e-15 86.7 219 34.7
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla HOM05D004795 ORTHO05D005518 3.4e-15 86.3 232 35.8
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 4.4e-15 85.9 227 37.4
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 5.8e-15 85.5 213 36.2
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 9.8e-15 84.7 127 48.8
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 1.3e-14 84.3 233 36.5
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 2.2e-14 83.6 227 37.4
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 2.2e-14 83.6 202 37.6
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 2.2e-14 83.6 238 34.0
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 2.9e-14 83.2 193 37.3
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 2.9e-14 83.2 221 32.6
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 4.9e-14 82.4 234 33.8
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 4.9e-14 82.4 242 37.2
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 6.4e-14 82.0 158 48.7
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 8.3e-14 81.6 243 32.9
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 8.3e-14 81.6 243 32.9
PSO532G0010 Papaver somniferum HOM05D004795 ORTHO05D005518 1.1e-13 81.3 158 52.5
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 1.4e-13 80.9 244 33.6
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 1.4e-13 80.9 214 35.5
PSO541G4271 Papaver somniferum HOM05D004795 ORTHO05D005518 1.4e-13 80.9 158 55.7
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 1.9e-13 80.5 243 32.9
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 1.9e-13 80.5 236 32.6
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 5.4e-13 79.0 199 35.2
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 9.2e-13 78.2 240 32.9
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 9.2e-13 78.2 247 33.6
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 9.2e-13 78.2 238 39.1
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 1.6e-12 77.4 196 42.9
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 1.6e-12 77.4 196 41.3
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 1.6e-12 77.4 242 33.5
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 2.1e-12 77.0 236 33.9
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 2.1e-12 77.0 239 32.6
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 6.0e-12 75.5 245 32.7
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 1.0e-11 74.7 240 32.9
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 1.0e-11 74.7 235 32.3
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 1.3e-11 74.3 209 35.4
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 2.3e-11 73.6 127 48.0
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 6.6e-11 72.0 222 32.9
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 6.6e-11 72.0 199 35.2
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 1.1e-10 71.2 202 34.7
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 2.5e-10 70.1 194 35.1
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 4.3e-10 69.3 260 41.5
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 7.3e-10 68.6 231 32.0
TPR.G32442 Trifolium pratense HOM05D004795 ORTHO05D005518 9.5e-10 68.2 127 45.7
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 1.2e-09 67.8 219 32.0
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 2.1e-09 67.0 106 50.0
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 2.1e-09 67.0 106 50.0
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 2.8e-09 66.6 248 29.8
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 3.6e-09 66.2 203 38.9
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 8.1e-09 65.1 253 30.0
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 8.1e-09 65.1 195 39.0
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 1.1e-08 64.7 256 33.2
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 1.8e-08 63.9 225 30.7
Lalb_Chr02g0158191 Lupinus albus HOM05D004795 ORTHO05D005518 2.3e-08 63.5 228 34.2
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 3.1e-08 63.2 184 34.2
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 4.0e-08 62.8 194 31.4
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 8.9e-08 61.6 124 38.7
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 1.2e-07 61.2 200 35.5
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 1.2e-07 61.2 186 32.8
Psat1g081000 Pisum sativum HOM05D004795 ORTHO05D005518 4.4e-07 59.3 125 40.8
unitig_32.g11886 Utricularia gibba HOM05D004795 ORTHO05D005518 5.8e-07 58.9 100 44.0
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 9.9e-07 58.2 177 34.5
CAN.G358.61 Capsicum annuum HOM05D004795 ORTHO05D005518 2.9e-06 56.6 90 45.6
SalBow5G0757 Salvia bowleyana HOM05D004795 ORTHO05D005518 3.7e-06 56.2 102 45.1
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 8.4e-06 55.1 162 32.1


User provided reference genes

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