Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00168 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 7.9e-203 710.3 376 100.0
Aqoxy7G03937 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 4.0e-162 575.1 380 82.4
TAR627G0926 Trochodendron aralioides HOM05D004411 ORTHO05D005569 5.7e-84 315.5 394 50.8
Dinv22283 Davidia involucrata HOM05D004411 ORTHO05D005569 8.7e-77 291.6 393 48.9
PSO210G6597 Papaver somniferum HOM05D004411 ORTHO05D005569 9.7e-76 288.1 395 45.8
TAR624G0740 Trochodendron aralioides HOM05D004411 ORTHO05D005569 1.2e-73 281.2 344 49.7
PSO210G7535 Papaver somniferum HOM05D004411 ORTHO05D005569 2.6e-73 280.0 396 45.5
CSS0013783 Camellia sinensis var. sinensis HOM05D004411 ORTHO05D005569 4.5e-73 279.3 387 47.0
Dinv40733 Davidia involucrata HOM05D004411 ORTHO05D005569 3.2e-71 273.1 350 50.0
Hma1.2p1_0938F.1_g239200 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 8.8e-69 265.0 390 45.6
Actinidia35328 Actinidia chinensis HOM05D004411 ORTHO05D005569 2.2e-67 260.4 395 45.3
Ciclev10008629m.g Citrus clementina HOM05D004411 ORTHO05D005569 6.3e-67 258.8 395 42.8
vmacro09736 Vaccinium macrocarpon HOM05D004411 ORTHO05D005569 1.1e-66 258.1 389 44.0
GSVIVG01008286001 Vitis vinifera HOM05D004411 ORTHO05D005569 1.1e-66 258.1 396 46.2
RcHm_v2.0_Chr5g0037971 Rosa chinensis HOM05D004411 ORTHO05D005569 6.9e-66 255.4 393 42.7
TWI38G0098 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 9.1e-66 255.0 407 43.5
Prupe.4G208500 Prunus persica HOM05D004411 ORTHO05D005569 6.5e-64 248.8 394 44.4
Solyc07g064300.3 Solanum lycopersicum HOM05D004411 ORTHO05D005569 1.1e-63 248.1 392 41.3
MELO3C003591.2 Cucumis melo HOM05D004411 ORTHO05D005569 1.4e-63 247.7 393 42.2
Rhsim04G0001700 Rhododendron simsii HOM05D004411 ORTHO05D005569 5.5e-63 245.7 404 43.1
Peaxi162Scf00450g00868 Petunia axillaris HOM05D004411 ORTHO05D005569 1.2e-62 244.6 391 42.5
Cc02_g24710 Coffea canephora HOM05D004411 ORTHO05D005569 3.6e-62 243.0 388 41.2
QL08p012116 Quercus lobata HOM05D004411 ORTHO05D005569 1.8e-61 240.7 417 41.2
CAN.G337.104 Capsicum annuum HOM05D004411 ORTHO05D005569 3.9e-61 239.6 384 41.7
Potri.011G136400 Populus trichocarpa HOM05D004411 ORTHO05D005569 3.9e-61 239.6 398 41.7
QL08p011929 Quercus lobata HOM05D004411 ORTHO05D005569 5.1e-61 239.2 417 41.0
HanXRQChr11g0336281 Helianthus annuus HOM05D004411 ORTHO05D005569 6.7e-61 238.8 379 42.5
Thecc.07G044400 Theobroma cacao HOM05D004411 ORTHO05D005569 8.8e-61 238.4 397 40.6
TWI38G2195 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 8.8e-61 238.4 248 54.0
FvH4_3g22120 Fragaria vesca HOM05D004411 ORTHO05D005569 1.5e-60 237.7 392 40.8
ClCG10G005570 Citrullus lanatus HOM05D004411 ORTHO05D005569 2.0e-60 237.3 394 40.4
Atru.chr2.3274 Acer truncatum HOM05D004411 ORTHO05D005569 2.6e-60 236.9 419 37.5
Medtr3g019330 Medicago truncatula HOM05D004411 ORTHO05D005569 5.7e-60 235.7 403 38.7
CiPaw.05G090700 Carya illinoinensis HOM05D004411 ORTHO05D005569 9.7e-60 235.0 395 41.3
PGR083G2632 Punica granatum HOM05D004411 ORTHO05D005569 1.7e-59 234.2 392 41.3
CANSAT56G2724 Cannabis sativa HOM05D004411 ORTHO05D005569 2.2e-59 233.8 395 41.8
MSTRG.12964 Avicennia marina HOM05D004411 ORTHO05D005569 8.2e-59 231.9 407 39.6
Rhsim04G0000600 Rhododendron simsii HOM05D004411 ORTHO05D005569 1.4e-58 231.1 407 41.3
Ca_24447_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 1.8e-58 230.7 406 38.9
ECA236G1785 Erigeron canadensis HOM05D004411 ORTHO05D005569 1.8e-58 230.7 384 40.9
Sed0027425 Sechium edule HOM05D004411 ORTHO05D005569 1.8e-58 230.7 391 39.1
Glyma.08G313000 Glycine max HOM05D004411 ORTHO05D005569 2.4e-58 230.3 337 40.9
Migut.H01843 Erythranthe guttata HOM05D004411 ORTHO05D005569 3.1e-58 229.9 401 40.6
Nitab4.5_0009551g0010 Nicotiana tabacum HOM05D004411 ORTHO05D005569 4.1e-58 229.6 409 39.9
CsaV3_3G017510 Cucumis sativus L. HOM05D004411 ORTHO05D005569 7.0e-58 228.8 400 39.2
Duzib213G0043 Durio zibethinus HOM05D004411 ORTHO05D005569 7.0e-58 228.8 397 39.8
MD11G1222400 Malus domestica HOM05D004411 ORTHO05D005569 9.1e-58 228.4 358 44.4
Ca_05663_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 1.2e-57 228.0 406 38.7
Atru.chr7.1306 Acer truncatum HOM05D004411 ORTHO05D005569 1.6e-57 227.6 250 49.6
Gorai.002G085400 Gossypium raimondii HOM05D004411 ORTHO05D005569 4.5e-57 226.1 392 39.5
Oeu021397.1 Olea europaea HOM05D004411 ORTHO05D005569 4.5e-57 226.1 250 52.8
Psat5g216880 Pisum sativum HOM05D004411 ORTHO05D005569 4.5e-57 226.1 404 38.9
Lsat_1_v5_gn_7_109101 Lactuca sativa HOM05D004411 ORTHO05D005569 5.9e-57 225.7 324 45.1
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.8e-56 223.0 408 40.2
Phvul.006G038300 Phaseolus vulgaris HOM05D004411 ORTHO05D005569 5.0e-56 222.6 344 40.7
Sc06g0005160 Simmondsia chinensis HOM05D004411 ORTHO05D005569 6.5e-56 222.2 329 45.0
Hund07317 Selenicereus undatus HOM05D004411 ORTHO05D005569 1.1e-55 221.5 404 37.6
Gohir.D01G064500 Gossypium hirsutum HOM05D004411 ORTHO05D005569 1.5e-55 221.1 392 39.0
RcHm_v2.0_Chr1g0330851 Rosa chinensis HOM05D004411 ORTHO05D005569 3.2e-55 219.9 217 55.8
Eucgr.E01365 Eucalyptus grandis HOM05D004411 ORTHO05D005569 4.2e-55 219.5 390 40.5
Gohir.A01G077000 Gossypium hirsutum HOM05D004411 ORTHO05D005569 4.2e-55 219.5 387 39.3
Lalb_Chr18g0049751 Lupinus albus HOM05D004411 ORTHO05D005569 2.1e-54 217.2 247 50.2
Lj6g0013350 Lotus japonicus HOM05D004411 ORTHO05D005569 2.7e-54 216.9 250 49.2
Sabra11G0122500 Salix brachista HOM05D004411 ORTHO05D005569 1.4e-53 214.5 413 39.2
TPR.G3855 Trifolium pratense HOM05D004411 ORTHO05D005569 2.3e-53 213.8 303 41.3
arahy.Tifrunner.gnm1.ann1.01DGNM Arachis hypogaea HOM05D004411 ORTHO05D005569 5.2e-53 212.6 269 46.8
CDE07G0547 Ceratophyllum demersum HOM05D004411 ORTHO05D005569 6.7e-53 212.2 337 39.5
EL10Ac9g22002 Beta vulgaris HOM05D004411 ORTHO05D005569 4.4e-52 209.5 398 39.2
SalBow7G1998 Salvia bowleyana HOM05D004411 ORTHO05D005569 9.7e-52 208.4 252 48.8
DCAR_008678 Daucus carota HOM05D004411 ORTHO05D005569 2.8e-51 206.8 386 41.2
SGA_v2.0_scaffold9G05058 Striga asiatica HOM05D004411 ORTHO05D005569 3.7e-51 206.5 274 45.3
AUR62000402 Chenopodium quinoa HOM05D004411 ORTHO05D005569 8.2e-51 205.3 377 40.3
Medtr4g088440 Medicago truncatula HOM05D004411 ORTHO05D005569 8.2e-51 205.3 241 46.5
HPP92_013625 Vanilla planifolia HOM05D004411 ORTHO05D005569 3.1e-50 203.4 387 40.3
arahy.Tifrunner.gnm1.ann1.7KL5HB Arachis hypogaea HOM05D004411 ORTHO05D005569 7.0e-50 202.2 265 44.9
unitig_0.g2388 Utricularia gibba HOM05D004411 ORTHO05D005569 9.1e-50 201.8 294 42.9
Glyma.08G318600 Glycine max HOM05D004411 ORTHO05D005569 2.0e-49 200.7 315 40.6
THA.LOC104798777 Tarenaya hassleriana HOM05D004411 ORTHO05D005569 3.5e-49 199.9 384 37.0
Oeu005458.1 Olea europaea HOM05D004411 ORTHO05D005569 1.3e-48 198.0 424 37.5
ATR0564G530 Amborella trichopoda HOM05D004411 ORTHO05D005569 1.7e-48 197.6 249 44.6
CiPaw.11G186800 Carya illinoinensis HOM05D004411 ORTHO05D005569 2.9e-48 196.8 220 50.9
Lj2g0018498 Lotus japonicus HOM05D004411 ORTHO05D005569 9.4e-47 191.8 313 40.9
Aa31LG10G3320 Aethionema arabicum HOM05D004411 ORTHO05D005569 5.2e-45 186.0 395 36.5
PGSC0003DMG402013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 5.2e-45 186.0 395 35.7
Os09g0504900 Oryza sativa ssp. japonica HOM05D004411 ORTHO05D005569 6.8e-45 185.7 328 36.9
CARHR040960 Cardamine hirsuta HOM05D004411 ORTHO05D005569 1.2e-44 184.9 243 44.9
Nn1g07099 Nelumbo nucifera HOM05D004411 ORTHO05D005569 5.7e-44 182.6 184 57.6
Thhalv10011488m.g Eutrema salsugineum HOM05D004411 ORTHO05D005569 1.7e-43 181.0 296 40.2
FAN21G4008 Fragaria x ananassa HOM05D004411 ORTHO05D005569 2.8e-43 180.3 407 35.4
Zm00001eb317630 Zea mays HOM05D004411 ORTHO05D005569 2.8e-43 180.3 344 36.9
Zm00001eb253190 Zea mays HOM05D004411 ORTHO05D005569 6.3e-43 179.1 218 45.4
AT1G50910 Arabidopsis thaliana HOM05D004411 ORTHO05D005569 8.3e-43 178.7 253 44.7
PSO210G0554 Papaver somniferum HOM05D004411 ORTHO05D005569 2.4e-42 177.2 278 42.4
Carub.0001s3986 Capsella rubella HOM05D004411 ORTHO05D005569 4.5e-41 172.9 252 43.7
AL1G58640 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 5.9e-41 172.6 383 34.7
Sp1g37650 Schrenkiella parvula HOM05D004411 ORTHO05D005569 1.3e-40 171.4 434 33.2
AUR62006758 Chenopodium quinoa HOM05D004411 ORTHO05D005569 5.0e-40 169.5 301 40.5
SHI31835 Sapria himalayana HOM05D004411 ORTHO05D005569 5.0e-40 169.5 261 44.1
Cpa.g.sc12.166 Carica papaya HOM05D004411 ORTHO05D005569 6.5e-40 169.1 392 34.7
BcaC08g43264 Brassica carinata HOM05D004411 ORTHO05D005569 8.5e-40 168.7 387 33.3
C06p06080 Brassica napus HOM05D004411 ORTHO05D005569 8.5e-40 168.7 387 33.3
BolC6t35721H Brassica oleracea HOM05D004411 ORTHO05D005569 8.5e-40 168.7 387 33.3
BraA06t23489Z Brassica rapa HOM05D004411 ORTHO05D005569 1.5e-39 167.9 245 42.0
BcaB07g33532 Brassica carinata HOM05D004411 ORTHO05D005569 9.4e-39 165.2 242 41.3
A06p02820 Brassica napus HOM05D004411 ORTHO05D005569 9.4e-39 165.2 291 37.5
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.6e-38 164.5 444 32.0
Lalb_Chr15g0080391 Lupinus albus HOM05D004411 ORTHO05D005569 2.1e-38 164.1 184 53.3
Manes.03G127300 Manihot esculenta HOM05D004411 ORTHO05D005569 2.0e-36 157.5 392 32.9
Nitab4.5_0000397g0320 Nicotiana tabacum HOM05D004411 ORTHO05D005569 2.2e-35 154.1 420 33.1
Sopen07g032450 Solanum pennellii HOM05D004411 ORTHO05D005569 2.8e-35 153.7 280 38.2
SEGI_26616 Sequoiadendron giganteum HOM05D004411 ORTHO05D005569 4.9e-35 152.9 414 31.4
COL.COLO4_09627 Corchorus olitorius HOM05D004411 ORTHO05D005569 8.3e-35 152.1 278 38.1
PSO339G6638 Papaver somniferum HOM05D004411 ORTHO05D005569 5.4e-34 149.4 214 43.9
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.5e-33 146.7 381 31.0
AL8G37460 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 4.5e-33 146.4 193 48.7
BolC5t32046H Brassica oleracea HOM05D004411 ORTHO05D005569 2.3e-32 144.1 216 42.1
AL2G19790 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 2.5e-31 140.6 185 48.6
BcaB06g26197 Brassica carinata HOM05D004411 ORTHO05D005569 5.6e-31 139.4 260 36.5
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 9.5e-31 138.7 371 32.3
Ah.06g195930 Amaranthus hybridus HOM05D004411 ORTHO05D005569 1.2e-28 131.7 145 52.4
Nitab4.5_0000622g0210 Nicotiana tabacum HOM05D004411 ORTHO05D005569 3.4e-28 130.2 183 47.5
BcaB02g11193 Brassica carinata HOM05D004411 ORTHO05D005569 2.9e-27 127.1 299 32.8
C05p33200 Brassica napus HOM05D004411 ORTHO05D005569 1.1e-26 125.2 192 42.7
ECA236G1239 Erigeron canadensis HOM05D004411 ORTHO05D005569 1.8e-26 124.4 236 38.6
MD03G1208200 Malus domestica HOM05D004411 ORTHO05D005569 7.0e-26 122.5 356 33.1
PGSC0003DMG401013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 5.9e-25 119.4 202 37.6
Glyma.09G101400 Glycine max HOM05D004411 ORTHO05D005569 4.3e-23 113.2 204 34.3
VMungo1383G2244 Vigna mungo HOM05D004411 ORTHO05D005569 3.6e-22 110.2 120 53.3
VMungo0540G0671 Vigna mungo HOM05D004411 ORTHO05D005569 4.7e-22 109.8 132 41.7
VMungo1383G3213 Vigna mungo HOM05D004411 ORTHO05D005569 2.3e-21 107.5 120 43.3
Pp3c25_11530 Physcomitrium patens HOM05D004411 ORTHO05D005569 1.5e-20 104.8 319 29.8
DCAR_011015 Daucus carota HOM05D004411 ORTHO05D005569 7.0e-18 95.9 126 45.2
Cc09_g02490 Coffea canephora HOM05D004411 ORTHO05D005569 3.3e-15 87.0 98 55.1
EL10Ac9g22233 Beta vulgaris HOM05D004411 ORTHO05D005569 2.1e-14 84.3 245 29.8
Hma1.2p1_3713F.1_g337350 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 2.8e-14 84.0 77 57.1
A05p19860 Brassica napus HOM05D004411 ORTHO05D005569 6.2e-14 82.8 122 42.6
BraA05t20891Z Brassica rapa HOM05D004411 ORTHO05D005569 6.2e-14 82.8 122 42.6
SMO367G0149 Selaginella moellendorffii HOM05D004411 ORTHO05D005569 4.0e-13 80.1 192 32.3
Mapoly0160s0028 Marchantia polymorpha HOM05D004411 ORTHO05D005569 1.5e-12 78.2 200 29.5
Cc00_g16970 Coffea canephora HOM05D004411 ORTHO05D005569 2.6e-12 77.4 90 54.4
Glyma.09G101500 Glycine max HOM05D004411 ORTHO05D005569 1.3e-11 75.1 81 49.4
Oeu034511.1 Olea europaea HOM05D004411 ORTHO05D005569 2.9e-11 73.9 77 53.2
AagrBONN_evm.TU.Sc2ySwM_344.3992 Anthoceros agrestis HOM05D004411 ORTHO05D005569 3.5e-09 67.0 112 40.2
Haze_07158 Corylus avellana HOM05D004411 ORTHO05D005569 1.2e-06 58.5 66 39.4
PGSC0003DMG400013925 Solanum tuberosum HOM05D004411 ORTHO05D005569 2.1e-06 57.8 49 59.2
Cc02_g22100 Coffea canephora HOM05D004411 ORTHO05D005569 6.2e-06 56.2 118 38.1


User provided reference genes

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