Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 1.1e-83 313.2 147 100.0
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 3.4e-45 185.3 148 64.2
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 3.8e-44 181.8 136 65.4
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 2.5e-43 179.1 96 81.2
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 2.5e-43 179.1 137 63.5
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 2.7e-42 175.6 126 65.9
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 2.7e-42 175.6 89 85.4
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 4.7e-42 174.9 140 61.4
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 4.7e-42 174.9 106 73.6
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 4.7e-42 174.9 127 64.6
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 1.8e-41 172.9 144 60.4
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 1.8e-41 172.9 85 87.1
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 3.0e-41 172.2 137 61.3
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 6.7e-41 171.0 148 57.4
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 6.7e-41 171.0 130 64.6
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 8.8e-41 170.6 142 60.6
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 8.8e-41 170.6 112 73.2
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.1e-40 170.2 110 70.9
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 1.5e-40 169.9 112 74.1
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 2.0e-40 169.5 95 80.0
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 2.0e-40 169.5 95 80.0
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 2.0e-40 169.5 95 80.0
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 2.0e-40 169.5 96 76.0
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 2.0e-40 169.5 88 85.2
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 2.6e-40 169.1 121 65.3
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 3.3e-40 168.7 120 67.5
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 3.3e-40 168.7 120 67.5
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 3.3e-40 168.7 101 73.3
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 4.4e-40 168.3 95 78.9
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 4.4e-40 168.3 120 67.5
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 4.4e-40 168.3 81 90.1
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 5.7e-40 167.9 98 77.6
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 7.4e-40 167.5 123 65.0
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 7.4e-40 167.5 148 58.1
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 1.3e-39 166.8 149 58.4
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 1.3e-39 166.8 88 84.1
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 1.3e-39 166.8 132 61.4
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 1.7e-39 166.4 96 78.1
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 1.7e-39 166.4 96 79.2
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 2.2e-39 166.0 143 60.1
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 3.7e-39 165.2 132 62.1
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 4.8e-39 164.9 83 84.3
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 4.8e-39 164.9 96 76.0
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 6.3e-39 164.5 147 55.8
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 6.3e-39 164.5 147 55.8
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 6.3e-39 164.5 83 83.1
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 8.2e-39 164.1 153 53.6
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 8.2e-39 164.1 140 57.9
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 1.4e-38 163.3 85 82.4
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 1.4e-38 163.3 147 59.2
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 7.0e-38 161.0 111 69.4
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 7.0e-38 161.0 140 57.1
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 9.1e-38 160.6 104 70.2
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 9.1e-38 160.6 96 74.0
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 1.2e-37 160.2 121 62.0
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 1.2e-37 160.2 144 54.9
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 1.2e-37 160.2 134 57.5
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 1.2e-37 160.2 140 57.1
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 1.6e-37 159.8 80 85.0
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 1.6e-37 159.8 123 61.0
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 1.6e-37 159.8 83 80.7
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 1.6e-37 159.8 149 57.7
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 2.0e-37 159.5 145 57.2
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 3.5e-37 158.7 103 68.9
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 4.5e-37 158.3 83 79.5
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 4.5e-37 158.3 85 78.8
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 7.7e-37 157.5 83 79.5
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 7.7e-37 157.5 80 81.2
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 1.3e-36 156.8 82 80.5
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 1.7e-36 156.4 81 82.7
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 2.9e-36 155.6 121 59.5
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 1.1e-35 153.7 81 79.0
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 7.2e-35 151.0 159 50.3
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 2.7e-34 149.1 80 80.0
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 1.4e-33 146.7 106 63.2
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 4.0e-33 145.2 97 67.0
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 8.8e-33 144.1 146 52.1
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 2.0e-32 142.9 111 59.5
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 2.0e-32 142.9 85 69.4
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 3.3e-32 142.1 111 58.6
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 5.3e-30 134.8 166 44.0
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 7.0e-30 134.4 167 43.7
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 2.0e-29 132.9 81 66.7
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 3.5e-29 132.1 126 50.8
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 5.0e-28 128.3 215 38.6
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 1.9e-27 126.3 82 63.4
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 4.4e-24 115.2 55 87.3
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 3.7e-23 112.1 51 92.2
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 2.4e-22 109.4 51 92.2
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 4.1e-22 108.6 76 65.8
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 1.6e-21 106.7 52 88.5
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 9.5e-19 97.4 81 59.3
ECA246G1632 Erigeron canadensis HOM05D007646 ORTHO05D004022 1.1e-11 73.9 34 82.4
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 4.3e-11 72.0 79 41.8
Nn3g18065 Nelumbo nucifera HOM05D007646 ORTHO05D004022 1.2e-10 70.5 79 49.4
PGR042G1372 Punica granatum HOM05D007710 ORTHO05D004022 6.1e-10 68.2 79 40.5
SMO347G0449 Selaginella moellendorffii HOM05D007710 ORTHO05D004022 1.0e-09 67.4 79 41.8
Aqoxy3G02299 Aquilegia oxysepala HOM05D007710 ORTHO05D004022 1.4e-09 67.0 80 41.2
Pp3c5_4790 Physcomitrium patens HOM05D007710 ORTHO05D004022 1.4e-09 67.0 82 37.8
EL10Ac3g05053 Beta vulgaris HOM05D007710 ORTHO05D004022 3.1e-09 65.9 89 36.0
Cc02_g00160 Coffea canephora HOM05D007710 ORTHO05D004022 3.1e-09 65.9 83 37.3
Actinidia08760 Actinidia chinensis HOM05D007710 ORTHO05D004022 5.2e-09 65.1 80 37.5
Nitab4.5_0000021g0800 Nicotiana tabacum HOM05D007710 ORTHO05D004022 5.2e-09 65.1 86 37.2
ECA233G0318 Erigeron canadensis HOM05D007710 ORTHO05D004022 6.8e-09 64.7 81 38.3
BcaB03g15335 Brassica carinata HOM05D007710 ORTHO05D004022 8.9e-09 64.3 80 37.5
TAR375G0377 Trochodendron aralioides HOM05D007710 ORTHO05D004022 8.9e-09 64.3 80 40.0
Lsat_1_v5_gn_2_60801 Lactuca sativa HOM05D007710 ORTHO05D004022 1.2e-08 63.9 77 39.0
Nitab4.5_0004530g0090 Nicotiana tabacum HOM05D007710 ORTHO05D004022 1.2e-08 63.9 86 36.0
BraA07t30900Z Brassica rapa HOM05D007710 ORTHO05D004022 1.5e-08 63.5 80 37.5
A07p32740 Brassica napus HOM05D007710 ORTHO05D004022 2.0e-08 63.2 80 37.5
MELO3C020311.2 Cucumis melo HOM05D007646 ORTHO05D004022 2.0e-08 63.2 45 62.2
Glyma.12G016700 Glycine max HOM05D007710 ORTHO05D004022 2.0e-08 63.2 83 37.3
unitig_748.g8495 Utricularia gibba HOM05D007646 ORTHO05D004022 2.0e-08 63.2 35 74.3
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 2.6e-08 62.8 79 38.0
CiPaw.06G035400 Carya illinoinensis HOM05D007710 ORTHO05D004022 3.4e-08 62.4 79 36.7
DCAR_009023 Daucus carota HOM05D007710 ORTHO05D004022 3.4e-08 62.4 83 36.1
Sp5g19360 Schrenkiella parvula HOM05D007710 ORTHO05D004022 3.4e-08 62.4 84 35.7
BolC6t38987H Brassica oleracea HOM05D007710 ORTHO05D004022 4.4e-08 62.0 83 34.9
AUR62028202 Chenopodium quinoa HOM05D007710 ORTHO05D004022 4.4e-08 62.0 83 34.9
FvH4_7g34150 Fragaria vesca HOM05D007710 ORTHO05D004022 4.4e-08 62.0 83 36.1
arahy.Tifrunner.gnm1.ann1.GY8AT6 Arachis hypogaea HOM05D007710 ORTHO05D004022 5.8e-08 61.6 79 38.0
arahy.Tifrunner.gnm1.ann1.U0IDC3 Arachis hypogaea HOM05D007710 ORTHO05D004022 5.8e-08 61.6 79 38.0
Haze_00383 Corylus avellana HOM05D007710 ORTHO05D004022 5.8e-08 61.6 79 36.7
unitig_747.g21335 Utricularia gibba HOM05D007710 ORTHO05D004022 5.8e-08 61.6 83 36.1
CSS0005120 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 7.5e-08 61.2 79 35.4
CSS0038916 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 7.5e-08 61.2 79 35.4
PSO782G0287 Papaver somniferum HOM05D007710 ORTHO05D004022 7.5e-08 61.2 80 37.5
AL2G19620 Arabidopsis lyrata HOM05D007710 ORTHO05D004022 9.8e-08 60.8 84 35.7
Lj3g0011322 Lotus japonicus HOM05D007710 ORTHO05D004022 9.8e-08 60.8 79 38.0
Phvul.011G019000 Phaseolus vulgaris HOM05D007710 ORTHO05D004022 9.8e-08 60.8 83 34.9
Prupe.2G328300 Prunus persica HOM05D007710 ORTHO05D004022 9.8e-08 60.8 79 34.2
PSO063G4155 Papaver somniferum HOM05D007710 ORTHO05D004022 1.3e-07 60.5 80 37.5
Hund09805 Selenicereus undatus HOM05D007710 ORTHO05D004022 1.3e-07 60.5 83 37.3
Aa31LG2G2200 Aethionema arabicum HOM05D007710 ORTHO05D004022 1.7e-07 60.1 83 33.7
CARHR056450 Cardamine hirsuta HOM05D007710 ORTHO05D004022 1.7e-07 60.1 83 33.7
TWI32G0404 Tripterygium wilfordii HOM05D007710 ORTHO05D004022 1.7e-07 60.1 79 36.7
ATR0057G097 Amborella trichopoda HOM05D007710 ORTHO05D004022 2.2e-07 59.7 85 36.5
Duzib128G0150 Durio zibethinus HOM05D007710 ORTHO05D004022 2.2e-07 59.7 83 36.1
RcHm_v2.0_Chr1g0384511 Rosa chinensis HOM05D007710 ORTHO05D004022 2.2e-07 59.7 79 35.4
PGSC0003DMG400003164 Solanum tuberosum HOM05D007710 ORTHO05D004022 2.2e-07 59.7 83 36.1
PGSC0003DMG402026486 Solanum tuberosum HOM05D007710 ORTHO05D004022 2.2e-07 59.7 83 36.1
THA.LOC104805715 Tarenaya hassleriana HOM05D007710 ORTHO05D004022 2.2e-07 59.7 79 35.4
GSVIVG01024345001 Vitis vinifera HOM05D007710 ORTHO05D004022 2.2e-07 59.7 79 35.4
FAN03G2015 Fragaria x ananassa HOM05D007710 ORTHO05D004022 2.9e-07 59.3 79 35.4
Potri.013G078866 Populus trichocarpa HOM05D007710 ORTHO05D004022 2.9e-07 59.3 80 38.8
C06p38950 Brassica napus HOM05D007710 ORTHO05D004022 3.7e-07 58.9 85 35.3
CAN.G1131.30 Capsicum annuum HOM05D007710 ORTHO05D004022 3.7e-07 58.9 79 35.4
HanXRQChr04g0105361 Helianthus annuus HOM05D007710 ORTHO05D004022 3.7e-07 58.9 81 37.0
TPR.G19627 Trifolium pratense HOM05D007710 ORTHO05D004022 3.7e-07 58.9 85 32.9
AT1G65000 Arabidopsis thaliana HOM05D007710 ORTHO05D004022 6.4e-07 58.2 84 34.5
CARHR057330 Cardamine hirsuta HOM05D007710 ORTHO05D004022 6.4e-07 58.2 83 33.7
Solyc03g097200.3 Solanum lycopersicum HOM05D007710 ORTHO05D004022 6.4e-07 58.2 83 34.9
Sopen03g027960 Solanum pennellii HOM05D007710 ORTHO05D004022 6.4e-07 58.2 83 34.9
Gohir.A13G101700 Gossypium hirsutum HOM05D007710 ORTHO05D004022 8.3e-07 57.8 83 34.9
Nn6g33555 Nelumbo nucifera HOM05D007710 ORTHO05D004022 8.3e-07 57.8 80 35.0
Atru.chr12.1914 Acer truncatum HOM05D007710 ORTHO05D004022 1.1e-06 57.4 79 35.4
Sed0013213 Sechium edule HOM05D007710 ORTHO05D004022 1.4e-06 57.0 89 34.8
Cre13.g605700 Chlamydomonas reinhardtii HOM05D007646 ORTHO05D004022 1.9e-06 56.6 84 34.5
Hma1.2p1_0649F.1_g195220 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 1.9e-06 56.6 77 33.8
Peaxi162Scf00516g00641 Petunia axillaris HOM05D007710 ORTHO05D004022 1.9e-06 56.6 79 34.2
Medtr4g478210 Medicago truncatula HOM05D007710 ORTHO05D004022 2.4e-06 56.2 81 33.3
Mapoly0120s0048 Marchantia polymorpha HOM05D007710 ORTHO05D004022 3.2e-06 55.8 79 32.9
HPP92_014617 Vanilla planifolia HOM05D007710 ORTHO05D004022 3.2e-06 55.8 83 33.7
MD01G1238100 Malus domestica HOM05D007710 ORTHO05D004022 4.1e-06 55.5 79 34.2
Psat7g170120 Pisum sativum HOM05D007710 ORTHO05D004022 4.1e-06 55.5 82 32.9
FAN10G2135 Fragaria x ananassa HOM05D003442 ORTHO05D004005 5.4e-06 55.1 83 33.7
Ciclev10033194m.g Citrus clementina HOM05D007710 ORTHO05D004022 9.2e-06 54.3 83 33.7
MD01G1238400 Malus domestica HOM05D007710 ORTHO05D004022 9.2e-06 54.3 79 34.2


User provided reference genes

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