Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 8.4e-247 856.7 462 100.0
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.0e-156 557.4 470 63.6
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 1.1e-148 530.8 374 68.4
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 5.4e-145 518.5 357 70.9
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.1e-144 516.5 411 63.7
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 3.0e-143 512.7 357 69.5
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 6.6e-143 511.5 360 71.4
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.9e-142 510.0 369 69.9
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 1.2e-141 507.3 360 70.8
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 1.1e-140 504.2 453 60.7
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.4e-140 503.8 357 70.9
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.8e-140 503.4 380 67.1
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 3.1e-140 502.7 415 63.1
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 8.9e-140 501.1 403 62.8
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 1.5e-139 500.4 419 61.8
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.7e-138 496.9 387 65.4
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.4e-137 493.8 389 63.8
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 9.2e-137 491.1 450 59.8
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 9.2e-137 491.1 406 62.8
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.7e-136 489.6 416 62.7
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-135 487.3 356 68.3
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.7e-135 486.9 353 68.8
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.3e-135 486.5 410 61.7
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 3.0e-135 486.1 361 67.9
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 3.9e-135 485.7 373 66.0
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 1.9e-134 483.4 356 67.7
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.9e-134 483.4 373 65.7
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 7.3e-134 481.5 381 64.3
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 9.6e-134 481.1 463 56.8
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 2.1e-133 479.9 361 65.7
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 8.1e-133 478.0 511 54.2
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 2.4e-132 476.5 403 61.5
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.4e-132 476.5 369 64.8
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 4.0e-132 475.7 365 68.2
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 5.2e-132 475.3 350 69.7
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.2e-131 474.2 369 64.2
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 4.4e-131 472.2 379 63.1
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 5.8e-131 471.9 357 65.3
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 7.6e-131 471.5 391 62.1
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 2.2e-130 469.9 425 58.8
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.9e-130 469.5 404 59.4
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 8.4e-130 468.0 303 74.9
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 2.4e-129 466.5 361 65.1
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 2.4e-129 466.5 461 54.2
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.2e-129 465.7 448 59.4
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 5.4e-129 465.3 381 61.4
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 4.6e-128 462.2 324 69.1
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 6.0e-128 461.8 390 60.8
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.0e-127 461.1 400 60.2
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 1.3e-127 460.7 348 68.7
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 5.1e-127 458.8 302 73.8
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 1.1e-126 457.6 388 59.5
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 1.9e-126 456.8 384 59.9
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.5e-126 456.4 402 59.7
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 2.5e-126 456.4 459 56.4
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 7.3e-126 454.9 373 63.3
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.6e-125 453.8 423 55.8
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.6e-125 453.8 410 59.0
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 4.8e-125 452.2 360 64.2
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 4.0e-124 449.1 410 58.3
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 6.9e-124 448.4 340 68.8
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 3.4e-123 446.0 355 62.8
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 1.7e-122 443.7 396 58.8
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 2.9e-122 443.0 376 60.1
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 3.8e-122 442.6 407 57.0
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 3.8e-122 442.6 362 62.2
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 4.9e-122 442.2 322 68.9
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-121 441.0 356 63.5
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.2e-121 439.5 410 59.5
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.2e-120 437.6 359 61.3
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.1e-120 436.8 349 63.3
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 6.0e-120 435.3 344 64.5
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 6.0e-120 435.3 360 61.9
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.0e-119 434.5 352 61.9
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.7e-119 431.4 352 63.4
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 1.1e-118 431.0 302 68.2
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 9.6e-118 427.9 357 62.7
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-117 427.6 361 61.8
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 2.8e-117 426.4 327 64.5
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 3.6e-117 426.0 357 61.3
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 6.2e-117 425.2 334 65.0
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.1e-117 424.9 367 61.3
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 8.1e-117 424.9 341 64.2
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 5.3e-116 422.2 361 59.8
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 9.0e-116 421.4 315 67.3
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-111 407.1 329 64.4
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.8e-109 399.8 331 63.4
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.9e-105 387.1 298 63.8
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 6.0e-104 382.1 295 63.7
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.5e-102 377.5 353 58.4
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.5e-102 377.5 256 73.0
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 1.5e-102 377.5 255 69.8
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.5e-102 376.7 403 51.9
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.0e-98 364.8 477 44.9
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.7e-94 348.2 367 54.0
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 4.8e-93 345.9 276 60.9
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 7.9e-88 328.6 383 51.2
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 8.5e-82 308.5 318 53.8
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.4e-79 301.2 241 64.7
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 2.8e-77 293.5 236 61.0
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 9.7e-70 268.5 293 46.4
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.2e-69 267.3 276 53.3
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 9.1e-68 261.9 227 57.3
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 1.9e-65 254.2 210 61.9
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 3.6e-64 250.0 230 56.1
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 5.7e-62 242.7 275 49.8
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 3.5e-59 233.4 169 64.5
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.2e-57 225.7 171 65.5
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 2.2e-53 214.2 190 58.9
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 4.9e-53 213.0 186 57.0
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 8.3e-53 212.2 291 41.6
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.7e-50 204.5 241 46.9
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 2.3e-47 194.1 200 60.0
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 4.1e-44 183.3 193 51.3
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 6.6e-34 149.4 146 52.7
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 8.6e-34 149.1 174 47.1
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 8.6e-34 149.1 186 46.2
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.9e-33 147.9 233 41.6
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 4.7e-32 143.3 111 62.2
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 4.4e-30 136.7 137 49.6
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 4.4e-30 136.7 332 32.5
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 6.0e-27 126.3 107 62.6
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 1.0e-26 125.6 106 64.2
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 1.1e-25 122.1 105 60.0
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 7.3e-25 119.4 77 75.3
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 2.1e-24 117.9 73 74.0
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 1.5e-22 111.7 189 41.3
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 3.4e-22 110.5 198 39.9
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 3.8e-21 107.1 109 51.4
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 2.1e-19 101.3 72 65.3
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 7.8e-19 99.4 224 32.1
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 1.1e-17 95.5 60 80.0
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 2.4e-15 87.8 62 66.1
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 3.1e-15 87.4 147 40.8
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 6.9e-15 86.3 252 28.6
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 2.0e-14 84.7 167 31.7
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 2.6e-14 84.3 269 26.0
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 6.4e-13 79.7 61 59.0
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 5.4e-12 76.6 62 59.7
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 3.0e-10 70.9 245 26.5
Aqoxy7G02730 Aquilegia oxysepala HOM05D001042 ORTHO05D006654 6.6e-10 69.7 45 91.1
Aqoxy5G03062 Aquilegia oxysepala HOM05D001042 ORTHO05D006654 8.7e-10 69.3 45 91.1
Aqoxy7G02970 Aquilegia oxysepala HOM05D001042 ORTHO05D006654 1.9e-09 68.2 45 88.9
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 1.9e-09 68.2 317 24.9
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 4.3e-09 67.0 260 22.7


User provided reference genes

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