Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 1.1e-243 846.3 431 100.0
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 5.9e-85 318.9 477 47.8
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 4.5e-69 266.2 503 40.2
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 1.7e-63 247.7 458 41.0
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 9.1e-62 241.9 445 40.4
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 7.7e-61 238.8 461 39.9
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 1.0e-60 238.4 454 40.1
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 6.5e-60 235.7 464 39.9
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 8.5e-60 235.3 455 40.2
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 5.5e-59 232.6 443 41.8
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 7.2e-59 232.3 459 37.5
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 8.0e-58 228.8 480 36.7
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 6.8e-57 225.7 456 39.7
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 9.8e-56 221.9 449 38.3
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 6.3e-55 219.2 440 38.6
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 7.0e-54 215.7 475 38.1
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 7.0e-54 215.7 436 39.7
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 7.0e-54 215.7 458 35.2
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 1.2e-53 214.9 463 37.6
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 5.9e-53 212.6 447 37.8
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 3.2e-51 206.8 459 36.6
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 1.6e-50 204.5 450 35.3
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 3.6e-50 203.4 450 36.4
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 3.6e-50 203.4 450 35.8
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 6.1e-50 202.6 461 35.6
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 6.1e-50 202.6 454 37.0
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 1.4e-49 201.4 445 36.0
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 1.8e-49 201.1 447 37.8
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 1.8e-49 201.1 462 35.1
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 1.8e-49 201.1 456 35.7
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 1.2e-48 198.4 467 38.8
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 1.5e-48 198.0 443 36.8
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 2.6e-48 197.2 461 35.4
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 4.4e-48 196.4 450 36.9
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 5.7e-48 196.1 440 36.4
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 9.8e-48 195.3 457 36.1
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 1.7e-47 194.5 443 36.8
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 2.2e-47 194.1 480 35.6
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 2.8e-47 193.7 455 36.9
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 4.9e-47 193.0 434 34.8
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 1.4e-46 191.4 441 37.0
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 3.1e-46 190.3 462 34.8
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 3.1e-46 190.3 465 37.0
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 4.1e-46 189.9 443 34.1
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 4.1e-46 189.9 402 36.3
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 7.0e-46 189.1 438 35.8
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 7.0e-46 189.1 438 35.8
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 3.5e-45 186.8 448 35.5
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 5.9e-45 186.0 435 36.6
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 1.3e-44 184.9 437 34.1
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 1.7e-44 184.5 473 36.2
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 2.3e-44 184.1 450 34.2
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 2.3e-44 184.1 468 33.3
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 2.3e-44 184.1 473 34.0
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 2.3e-44 184.1 471 35.9
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 6.6e-44 182.6 442 36.2
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 1.5e-43 181.4 447 34.7
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 1.5e-43 181.4 477 33.1
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 1.9e-43 181.0 469 34.3
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 2.5e-43 180.6 489 32.9
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 2.5e-43 180.6 489 32.9
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 5.5e-43 179.5 464 33.4
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 7.2e-43 179.1 264 45.5
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 9.5e-43 178.7 479 32.4
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 1.2e-42 178.3 471 32.7
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 1.6e-42 177.9 413 36.6
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 3.0e-41 173.7 362 37.0
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 4.0e-41 173.3 455 33.6
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 1.2e-40 171.8 435 32.4
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 9.8e-40 168.7 367 37.1
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 9.8e-40 168.7 449 34.5
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 2.2e-39 167.5 289 41.2
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.8e-38 164.5 251 42.2
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 1.8e-38 164.5 442 31.7
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 4.6e-37 159.8 470 30.4
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 5.9e-37 159.5 380 32.9
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 1.3e-36 158.3 438 32.9
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 2.3e-36 157.5 247 42.9
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 2.9e-36 157.1 458 32.3
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 2.8e-34 150.6 181 48.6
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 3.6e-34 150.2 254 43.3
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 3.6e-34 150.2 470 33.2
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 5.2e-33 146.4 463 31.1
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 1.3e-31 141.7 313 35.1
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 8.3e-31 139.0 221 40.3
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 2.4e-30 137.5 164 47.6
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 1.0e-28 132.1 227 41.4
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 1.5e-27 128.3 185 39.5
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 4.3e-27 126.7 353 29.5
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 6.2e-26 122.9 299 35.1
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 1.1e-25 122.1 104 56.7
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 2.3e-25 120.9 284 32.0
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 1.5e-24 118.2 182 40.1
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 2.9e-23 114.0 91 61.5
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 4.9e-23 113.2 275 33.5
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 6.0e-21 106.3 183 36.6
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 3.9e-20 103.6 192 40.1
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.1e-17 95.5 196 34.7
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.1e-17 95.5 196 34.7
unitig_8.g4506 Utricularia gibba HOM05D007068 ORTHO05D008590 2.6e-16 90.9 454 28.9
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 5.8e-16 89.7 84 58.3
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 2.2e-15 87.8 153 37.9
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 3.2e-14 84.0 124 42.7
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 7.8e-13 79.3 75 46.7
Cre03.g201700 Chlamydomonas reinhardtii HOM05D007068 ORTHO05D008590 2.5e-11 74.3 218 29.4
VMungo0251G2390 Vigna mungo HOM05D007068 ORTHO05D008590 3.6e-10 70.5 99 36.4
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 4.7e-10 70.1 56 58.9
CBR_g21755 Chara braunii HOM05D007068 ORTHO05D008590 7.1e-06 56.2 54 46.3


User provided reference genes

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