Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 0.0e+00 1140.9 562 100.0
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 4.9e-241 837.8 570 72.3
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 8.7e-230 800.4 569 67.8
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 1.8e-227 792.7 569 67.8
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 7.6e-226 787.3 572 66.6
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 9.9e-226 786.9 569 66.1
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 4.6e-223 778.1 571 66.7
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 7.8e-223 777.3 571 65.8
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 3.9e-222 775.0 569 66.6
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 4.3e-221 771.5 571 65.1
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 7.3e-221 770.8 569 65.6
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 1.4e-219 766.5 571 65.3
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 1.8e-219 766.1 572 63.8
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 3.1e-219 765.4 570 65.4
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 9.0e-219 763.8 569 64.9
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 1.2e-218 763.5 573 64.2
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 1.5e-218 763.1 567 66.3
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 3.4e-218 761.9 567 66.3
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 5.8e-218 761.1 569 64.9
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 9.9e-218 760.4 569 64.7
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 1.3e-217 760.0 564 65.2
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 5.4e-216 754.6 570 63.5
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 2.7e-215 752.3 570 63.5
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 6.0e-215 751.1 567 63.1
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 7.9e-215 750.7 572 63.5
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 7.9e-215 750.7 572 62.1
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 1.0e-214 750.4 570 63.3
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 1.3e-214 750.0 570 62.6
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.3e-214 750.0 569 63.6
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 3.0e-214 748.8 566 65.0
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 3.0e-214 748.8 571 63.4
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.5e-213 746.5 567 63.0
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 5.6e-213 744.6 570 63.2
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 6.2e-212 741.1 583 61.9
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 8.1e-212 740.7 575 63.3
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.8e-211 739.6 569 63.1
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 1.5e-210 736.5 573 63.5
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 4.5e-210 734.9 570 62.6
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 5.8e-210 734.6 608 60.4
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 3.8e-209 731.9 571 61.5
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 3.8e-209 731.9 570 61.1
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 6.5e-209 731.1 573 61.4
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 2.5e-208 729.2 567 63.0
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 4.6e-207 724.9 530 66.4
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 7.9e-207 724.2 564 62.6
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 5.1e-206 721.5 563 62.7
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 1.1e-205 720.3 571 61.6
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 4.3e-205 718.4 618 57.6
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 8.2e-204 714.1 544 62.5
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 5.3e-203 711.4 567 60.7
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 1.5e-202 709.9 564 61.3
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 2.6e-202 709.1 563 61.3
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.3e-201 706.8 567 60.7
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 1.1e-200 703.7 568 60.4
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 9.3e-200 700.7 530 63.2
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 2.3e-198 696.0 571 59.9
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 5.1e-198 694.9 556 60.6
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 4.3e-197 691.8 571 60.2
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 4.3e-197 691.8 569 60.3
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 2.8e-196 689.1 572 60.5
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 4.8e-196 688.3 530 61.9
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 4.1e-195 685.3 542 63.3
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 5.3e-195 684.9 563 59.7
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 2.0e-194 682.9 564 59.2
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 6.5e-193 677.9 532 62.6
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 8.5e-193 677.6 577 60.7
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 3.2e-192 675.6 525 62.7
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 3.2e-192 675.6 560 60.2
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 4.8e-188 661.8 571 59.2
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 1.6e-183 646.7 507 61.9
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 1.6e-183 646.7 564 57.3
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 5.1e-182 641.7 465 66.5
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 2.2e-180 636.3 529 60.5
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 1.8e-179 633.3 597 55.1
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 1.2e-178 630.6 530 58.1
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 1.1e-176 624.0 465 64.9
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 1.4e-174 617.1 530 59.1
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 3.0e-174 615.9 577 54.8
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 9.7e-173 610.9 460 63.9
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 2.2e-172 609.8 563 53.3
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 1.2e-165 587.4 498 59.6
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 5.4e-163 578.6 484 59.5
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 7.2e-160 568.2 569 51.8
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 1.8e-155 553.5 689 44.7
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 3.1e-155 552.7 529 51.2
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 1.9e-152 543.5 601 49.8
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 2.5e-152 543.1 529 52.9
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 4.7e-151 538.9 529 53.1
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 9.8e-141 504.6 486 54.7
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 2.9e-140 503.1 402 61.2
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 1.9e-123 447.2 323 68.4
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 1.2e-114 417.9 304 66.1
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 7.3e-112 408.7 601 39.1
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 8.4e-108 395.2 276 66.7
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 1.7e-105 387.5 320 58.1
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 2.5e-104 383.6 590 36.3
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 1.1e-102 378.3 340 54.7
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 2.6e-101 373.6 409 48.7
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 3.2e-99 366.7 321 57.3
CARHR124960 Cardamine hirsuta HOM05D006190 ORTHO05D008260 2.7e-90 337.0 272 60.3
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 4.3e-88 329.7 260 60.8
Psat5g111240 Pisum sativum HOM05D006190 ORTHO05D008260 9.3e-83 312.0 273 54.9
SEGI_33791 Sequoiadendron giganteum HOM05D006190 ORTHO05D008260 2.8e-79 300.4 244 59.0
FAN18G3300 Fragaria x ananassa HOM05D006190 ORTHO05D008260 4.8e-79 299.7 254 58.3
CAN.G795.2 Capsicum annuum HOM05D006190 ORTHO05D008260 1.5e-77 294.7 268 55.6
TPR.G18389 Trifolium pratense HOM05D006190 ORTHO05D008260 3.7e-71 273.5 208 65.4
Oeu015049.1 Olea europaea HOM05D006190 ORTHO05D008260 2.0e-56 224.6 156 70.5
SHI10056 Sapria himalayana HOM05D006190 ORTHO05D008260 4.4e-56 223.4 212 52.4
C04p19010 Brassica napus HOM05D006190 ORTHO05D008260 1.8e-54 218.0 170 61.8
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 9.4e-51 205.7 690 26.7
THA.LOC104822845 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 3.0e-49 200.7 140 65.0
Sopen11g022430 Solanum pennellii HOM05D006190 ORTHO05D008260 3.5e-45 187.2 214 47.7
TPR.G36458 Trifolium pratense HOM05D006190 ORTHO05D008260 8.5e-44 182.6 186 53.2
BcaC01g05972 Brassica carinata HOM05D006190 ORTHO05D008260 3.1e-38 164.1 169 53.3
FAN10G3459 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.5e-37 160.6 148 52.7
Sabra14G0120600 Salix brachista HOM05D006190 ORTHO05D008260 8.6e-36 156.0 170 50.0
QL08p030629 Quercus lobata HOM05D006190 ORTHO05D027094 3.2e-30 137.5 86 75.6
Lsat_1_v5_gn_5_72540 Lactuca sativa HOM05D006190 ORTHO05D008260 9.5e-27 125.9 118 52.5
C03p20570 Brassica napus HOM05D006190 ORTHO05D008260 2.0e-24 118.2 149 48.3
CDE04G2645 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 2.6e-24 117.9 121 52.9
Hund15364 Selenicereus undatus HOM05D006190 ORTHO05D027094 1.2e-13 82.4 50 70.0
BcaC01g05961 Brassica carinata HOM05D006190 ORTHO05D008260 3.3e-11 74.3 90 38.9
BcaC02g11231 Brassica carinata HOM05D006190 ORTHO05D027094 8.1e-10 69.7 46 69.6
Lsat_1_v5_gn_1_125520 Lactuca sativa HOM05D006190 ORTHO05D008260 5.2e-09 67.0 90 42.2


User provided reference genes

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