Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 8.3e-226 786.9 473 100.0
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 5.4e-132 475.3 402 64.9
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 7.0e-132 474.9 495 54.9
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 3.5e-131 472.6 497 56.1
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.7e-130 470.3 388 67.8
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 2.9e-130 469.5 394 68.0
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 1.1e-129 467.6 496 56.9
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 1.6e-128 463.8 493 56.8
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 3.0e-127 459.5 471 58.4
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 3.0e-127 459.5 388 64.9
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 5.8e-126 455.3 495 57.0
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 9.8e-126 454.5 495 53.9
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 2.4e-124 449.9 396 60.6
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 7.0e-124 448.4 399 64.9
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 2.0e-123 446.8 399 64.7
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 2.7e-123 446.4 369 64.2
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.1e-121 441.0 391 63.9
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.5e-121 440.7 399 63.7
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 2.8e-120 436.4 380 60.5
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 3.6e-120 436.0 400 59.2
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 1.4e-119 434.1 397 60.2
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 4.0e-119 432.6 391 61.6
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 2.6e-118 429.9 391 61.4
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 1.3e-117 427.6 384 59.4
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 1.7e-117 427.2 391 61.9
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 3.7e-117 426.0 495 52.1
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 8.3e-117 424.9 373 60.9
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 8.3e-117 424.9 373 60.9
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 1.1e-116 424.5 394 62.2
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 1.4e-116 424.1 400 61.0
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 1.6e-115 420.6 389 57.8
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 7.8e-115 418.3 395 61.0
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 3.0e-114 416.4 381 58.0
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 8.6e-114 414.8 399 58.4
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 1.9e-113 413.7 400 61.2
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 4.3e-113 412.5 470 57.7
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 7.3e-113 411.8 397 57.2
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 7.3e-113 411.8 392 58.4
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 9.5e-113 411.4 391 56.8
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 1.2e-112 411.0 357 62.2
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 4.7e-112 409.1 482 53.5
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 1.1e-111 407.9 393 61.3
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 1.1e-111 407.9 393 61.3
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 1.8e-111 407.1 451 51.2
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 2.3e-111 406.8 393 61.1
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 4.0e-111 406.0 385 56.9
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 8.9e-111 404.8 406 57.4
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 5.8e-110 402.1 404 54.7
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 2.2e-109 400.2 395 58.0
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 3.7e-109 399.4 375 63.5
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 4.9e-109 399.1 399 60.2
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 6.4e-109 398.7 389 55.0
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 8.3e-109 398.3 404 58.9
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 1.2e-107 394.4 400 59.8
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.0e-106 391.3 404 58.2
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 3.0e-106 389.8 381 56.4
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.9e-106 389.4 403 56.8
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 6.6e-106 388.7 404 58.2
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 5.6e-105 385.6 421 52.5
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 2.4e-103 380.2 353 59.5
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 1.2e-102 377.9 400 55.0
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 3.4e-102 376.3 370 57.0
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 1.7e-101 374.0 384 53.4
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 2.2e-101 373.6 379 57.0
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 8.4e-101 371.7 397 54.2
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.1e-100 371.3 248 74.2
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 3.2e-100 369.8 384 52.1
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 6.0e-99 365.5 387 51.2
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 1.0e-98 364.8 398 55.0
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 2.3e-98 363.6 400 54.0
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 2.3e-98 363.6 400 53.5
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 3.9e-98 362.8 362 54.7
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 8.7e-98 361.7 394 52.5
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 8.7e-98 361.7 401 53.6
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 2.5e-97 360.1 393 56.2
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 3.3e-97 359.8 410 49.5
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 1.2e-96 357.8 398 56.0
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 2.1e-96 357.1 404 52.7
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 2.8e-96 356.7 404 52.0
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 3.6e-96 356.3 391 57.3
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 3.1e-95 353.2 373 53.9
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 1.5e-94 350.9 251 69.7
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 2.0e-94 350.5 265 67.2
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.1e-92 344.7 238 72.3
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 2.4e-92 343.6 395 53.2
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 3.2e-92 343.2 367 51.2
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 1.2e-91 341.3 405 52.3
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 3.0e-90 336.7 450 45.8
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 3.2e-84 316.6 281 61.9
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.0e-82 311.6 284 60.2
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 2.6e-78 297.0 297 55.6
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 5.5e-76 289.3 263 56.3
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 9.3e-76 288.5 364 50.3
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 1.3e-74 284.6 383 43.1
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 4.3e-73 279.6 417 45.3
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 1.8e-71 274.2 211 65.9
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 7.9e-67 258.8 418 42.8
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.0e-62 244.2 408 39.5
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 3.4e-62 243.4 155 76.1
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 1.0e-61 241.9 462 41.3
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 2.8e-56 223.8 342 37.7
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 3.8e-53 213.4 209 51.2
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 3.9e-50 203.4 391 43.2
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 3.6e-43 180.3 137 68.6
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 6.7e-42 176.0 152 62.5
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.2e-32 144.4 141 50.4
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 1.7e-16 91.7 174 33.3
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 7.8e-14 82.8 174 47.1
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 4.4e-09 67.0 42 69.0
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 9.2e-07 59.3 37 70.3


User provided reference genes

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