Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy392s001 Aquilegia oxysepala HOM05D005836 ORTHO05D007335 2.4e-34 148.3 74 100.0
Aqoxy2G00686 Aquilegia oxysepala HOM05D005836 ORTHO05D007335 1.7e-21 105.5 105 57.1
Lj1C109T5 Lonicera japonica HOM05D005836 ORTHO05D007335 1.1e-18 96.3 105 49.5
Nitab4.5_0000195g0180 Nicotiana tabacum HOM05D005836 ORTHO05D007335 5.8e-17 90.5 97 52.6
CDE07G0908 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 1.3e-16 89.4 105 50.5
PSO339G6500 Papaver somniferum HOM05D005836 ORTHO05D007335 1.7e-16 89.0 102 50.0
FvH4_3g41200 Fragaria vesca HOM05D005836 ORTHO05D007335 2.2e-16 88.6 101 50.5
FAN16G0502 Fragaria x ananassa HOM05D005836 ORTHO05D007335 2.2e-16 88.6 101 50.5
FAN21G0342 Fragaria x ananassa HOM05D005836 ORTHO05D007335 2.2e-16 88.6 101 50.5
Phvul.006G082200 Phaseolus vulgaris HOM05D005836 ORTHO05D007335 2.9e-16 88.2 103 48.5
DCAR_018590 Daucus carota HOM05D005836 ORTHO05D007335 3.8e-16 87.8 103 47.6
Glyma.18G049400 Glycine max HOM05D005836 ORTHO05D007335 3.8e-16 87.8 103 48.5
HanXRQChr01g0013111 Helianthus annuus HOM05D005836 ORTHO05D007335 6.4e-16 87.0 105 46.7
VMungo0540G1704 Vigna mungo HOM05D005836 ORTHO05D007335 6.4e-16 87.0 103 47.6
arahy.Tifrunner.gnm1.ann1.JICC5Y Arachis hypogaea HOM05D005836 ORTHO05D007335 8.4e-16 86.7 103 48.5
Peaxi162Scf00372g00716 Petunia axillaris HOM05D005836 ORTHO05D007335 8.4e-16 86.7 102 49.0
Glyma.11G201500 Glycine max HOM05D005836 ORTHO05D007335 1.4e-15 85.9 103 48.5
Lj6g0005555 Lotus japonicus HOM05D005836 ORTHO05D007335 1.9e-15 85.5 103 46.6
Nitab4.5_0002985g0050 Nicotiana tabacum HOM05D005836 ORTHO05D007335 1.9e-15 85.5 102 49.0
PSO384G1899 Papaver somniferum HOM05D005836 ORTHO05D007335 1.9e-15 85.5 102 48.0
RcHm_v2.0_Chr5g0074011 Rosa chinensis HOM05D005836 ORTHO05D007335 4.2e-15 84.3 101 47.5
Lsat_1_v5_gn_5_176900 Lactuca sativa HOM05D005836 ORTHO05D007335 5.4e-15 84.0 105 44.8
MD03G1046500 Malus domestica HOM05D005836 ORTHO05D007335 5.4e-15 84.0 105 43.8
QL01p023477 Quercus lobata HOM05D005836 ORTHO05D007335 5.4e-15 84.0 105 46.7
QL01p023545 Quercus lobata HOM05D005836 ORTHO05D007335 5.4e-15 84.0 105 46.7
Cfa011862 Carpinus fangiana HOM05D005836 ORTHO05D007335 7.1e-15 83.6 103 47.6
Haze_24497 Corylus avellana HOM05D005836 ORTHO05D007335 7.1e-15 83.6 103 47.6
Nitab4.5_0002641g0060 Nicotiana tabacum HOM05D005836 ORTHO05D007335 7.1e-15 83.6 102 48.0
Peaxi162Scf00293g00715 Petunia axillaris HOM05D005836 ORTHO05D007335 7.1e-15 83.6 102 48.0
arahy.Tifrunner.gnm1.ann1.IJ2DEQ Arachis hypogaea HOM05D005836 ORTHO05D007335 9.3e-15 83.2 103 46.6
arahy.Tifrunner.gnm1.ann1.R5IFJT Arachis hypogaea HOM05D005836 ORTHO05D007335 9.3e-15 83.2 103 46.6
Rhsim01G0245400 Rhododendron simsii HOM05D005836 ORTHO05D007335 9.3e-15 83.2 105 45.7
Sed0001744 Sechium edule HOM05D005836 ORTHO05D007335 9.3e-15 83.2 103 47.6
vmacro14659 Vaccinium macrocarpon HOM05D005836 ORTHO05D007335 9.3e-15 83.2 105 46.7
CANSAT54G2930 Cannabis sativa HOM05D005836 ORTHO05D007335 1.2e-14 82.8 103 45.6
ECA248G3143 Erigeron canadensis HOM05D005836 ORTHO05D007335 1.2e-14 82.8 105 45.7
MD11G1049300 Malus domestica HOM05D005836 ORTHO05D007335 1.2e-14 82.8 105 44.8
Actinidia34513 Actinidia chinensis HOM05D005836 ORTHO05D007335 1.6e-14 82.4 101 48.5
Ah.02g126180 Amaranthus hybridus HOM05D002324 ORTHO05D002380 1.6e-14 82.4 102 46.1
Prupe.6G037800 Prunus persica HOM05D005836 ORTHO05D007335 1.6e-14 82.4 48 79.2
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 2.1e-14 82.0 50 80.0
Manes.18G122400 Manihot esculenta HOM05D005836 ORTHO05D007335 2.1e-14 82.0 105 44.8
COL.COLO4_11235 Corchorus olitorius HOM05D005836 ORTHO05D007335 2.7e-14 81.6 102 45.1
Solyc06g007760.4 Solanum lycopersicum HOM05D005836 ORTHO05D007335 2.7e-14 81.6 102 45.1
Sopen06g002640 Solanum pennellii HOM05D005836 ORTHO05D007335 2.7e-14 81.6 102 45.1
CiPaw.13G059700 Carya illinoinensis HOM05D005836 ORTHO05D007335 4.6e-14 80.9 103 45.6
Thecc.09G366400 Theobroma cacao HOM05D005836 ORTHO05D007335 4.6e-14 80.9 103 45.6
ATR1127G006 Amborella trichopoda HOM05D005836 ORTHO05D007335 6.0e-14 80.5 103 44.7
Duzib168G0065 Durio zibethinus HOM05D005836 ORTHO05D007335 6.0e-14 80.5 104 44.2
Nitab4.5_0002399g0060 Nicotiana tabacum HOM05D005836 ORTHO05D007335 6.0e-14 80.5 89 52.8
Hma1.2p1_0161F.1_g071980 Hydrangea macrophylla HOM05D005836 ORTHO05D007335 7.9e-14 80.1 105 40.0
CSS0005992 Camellia sinensis var. sinensis HOM05D005836 ORTHO05D007335 1.0e-13 79.7 105 41.9
Gohir.D03G146100 Gossypium hirsutum HOM05D005836 ORTHO05D007335 1.0e-13 79.7 103 43.7
PGSC0003DMG400020645 Solanum tuberosum HOM05D005836 ORTHO05D007335 1.0e-13 79.7 102 44.1
CAN.G869.16 Capsicum annuum HOM05D005836 ORTHO05D007335 1.3e-13 79.3 102 45.1
Dinv28763 Davidia involucrata HOM05D005836 ORTHO05D007335 1.3e-13 79.3 105 44.8
SalBow2G1106 Salvia bowleyana HOM05D005836 ORTHO05D007335 1.3e-13 79.3 103 42.7
Aa31LG11G40 Aethionema arabicum HOM05D005836 ORTHO05D007335 1.8e-13 79.0 101 45.5
Sabra13G0128800 Salix brachista HOM05D005836 ORTHO05D007335 1.8e-13 79.0 103 43.7
Ca_15089_v3 Cicer arietinum L. HOM05D005836 ORTHO05D007335 2.3e-13 78.6 101 44.6
Gohir.A03G022600 Gossypium hirsutum HOM05D005836 ORTHO05D007335 2.3e-13 78.6 103 42.7
Manes.02G210261 Manihot esculenta HOM05D005836 ORTHO05D007335 2.3e-13 78.6 92 46.7
Os03g0331600 Oryza sativa ssp. japonica HOM05D005836 ORTHO05D007335 2.3e-13 78.6 102 44.1
Psat5g146440 Pisum sativum HOM05D005836 ORTHO05D007335 2.3e-13 78.6 101 44.6
Medtr3g062920 Medicago truncatula HOM05D005836 ORTHO05D007335 3.0e-13 78.2 101 45.5
Nn5g26758 Nelumbo nucifera HOM05D005836 ORTHO05D007335 3.0e-13 78.2 50 78.0
Potri.013G161000 Populus trichocarpa HOM05D005836 ORTHO05D007335 3.0e-13 78.2 103 43.7
PGR119G1588 Punica granatum HOM05D005836 ORTHO05D007335 3.0e-13 78.2 102 43.1
Sc03g0000150 Simmondsia chinensis HOM05D005836 ORTHO05D007335 3.0e-13 78.2 105 42.9
TPR.G13816 Trifolium pratense HOM05D005836 ORTHO05D007335 3.0e-13 78.2 101 45.5
TAR633G1361 Trochodendron aralioides HOM05D005836 ORTHO05D007335 3.0e-13 78.2 105 42.9
Cc01_g15580 Coffea canephora HOM05D005836 ORTHO05D007335 3.9e-13 77.8 102 44.1
Eucgr.L00742 Eucalyptus grandis HOM05D005836 ORTHO05D007335 5.1e-13 77.4 103 42.7
Thhalv10014671m.g Eutrema salsugineum HOM05D005836 ORTHO05D007335 5.1e-13 77.4 101 44.6
Lalb_Chr17g0345731 Lupinus albus HOM05D005836 ORTHO05D007335 5.1e-13 77.4 102 44.1
A03p12350 Brassica napus HOM05D000347 ORTHO05D001997 6.7e-13 77.0 105 42.9
BraA03t10547Z Brassica rapa HOM05D000347 ORTHO05D001997 6.7e-13 77.0 105 42.9
Lalb_Chr10g0103941 Lupinus albus HOM05D005836 ORTHO05D007335 6.7e-13 77.0 47 78.7
Oeu023901.1 Olea europaea HOM05D005836 ORTHO05D007335 6.7e-13 77.0 102 42.2
unitig_60.g25569 Utricularia gibba HOM05D005836 ORTHO05D007335 8.7e-13 76.6 104 41.3
BcaB01g04482 Brassica carinata HOM05D005836 ORTHO05D007335 1.1e-12 76.3 50 74.0
Ciclev10002134m.g Citrus clementina HOM05D005836 ORTHO05D007335 1.1e-12 76.3 103 43.7
Migut.N00709 Erythranthe guttata HOM05D005836 ORTHO05D007335 1.5e-12 75.9 100 44.0
Atru.chr10.2368 Acer truncatum HOM05D005836 ORTHO05D007335 2.5e-12 75.1 101 44.6
ClCG02G018930 Citrullus lanatus HOM05D005836 ORTHO05D007335 2.5e-12 75.1 103 44.7
TWI31G0503 Tripterygium wilfordii HOM05D005836 ORTHO05D007335 4.3e-12 74.3 103 42.7
GSVIVG01024524001 Vitis vinifera HOM05D005836 ORTHO05D007335 4.3e-12 74.3 101 43.6
CsaV3_6G013260 Cucumis sativus L. HOM05D005836 ORTHO05D007335 5.6e-12 73.9 103 41.7
Sp6g19910 Schrenkiella parvula HOM05D005836 ORTHO05D007335 5.6e-12 73.9 46 76.1
SEGI_40201 Sequoiadendron giganteum HOM05D005836 ORTHO05D007335 5.6e-12 73.9 46 76.1
SGA_v2.0_scaffold77G25345 Striga asiatica HOM05D005836 ORTHO05D007335 5.6e-12 73.9 100 43.0
Zm00001eb015790 Zea mays HOM05D005836 ORTHO05D007335 5.6e-12 73.9 47 74.5
Carub.0008s1879 Capsella rubella HOM05D005836 ORTHO05D007335 7.4e-12 73.6 46 76.1
MELO3C019598.2 Cucumis melo HOM05D005836 ORTHO05D007335 7.4e-12 73.6 101 42.6
Oeu020454.1 Olea europaea HOM05D005836 ORTHO05D007335 7.4e-12 73.6 102 40.2
CARHR272060 Cardamine hirsuta HOM05D005836 ORTHO05D007335 9.6e-12 73.2 46 76.1
AUR62027208 Chenopodium quinoa HOM05D005836 ORTHO05D007335 9.6e-12 73.2 98 41.8
unitig_0.g428 Utricularia gibba HOM05D000994 ORTHO05D007335 1.3e-11 72.8 46 76.1
AT5G58250 Arabidopsis thaliana HOM05D005836 ORTHO05D007335 1.6e-11 72.4 46 76.1
Manes.15G176000 Manihot esculenta HOM05D005836 ORTHO05D007335 1.6e-11 72.4 48 72.9
AL8G34350 Arabidopsis lyrata HOM05D005836 ORTHO05D007335 2.1e-11 72.0 46 73.9
MSTRG.17936 Avicennia marina HOM05D005836 ORTHO05D007335 2.1e-11 72.0 103 40.8
BcaB01g04542 Brassica carinata HOM05D005836 ORTHO05D007335 2.8e-11 71.6 101 41.6
BcaC04g19899 Brassica carinata HOM05D005836 ORTHO05D007335 2.8e-11 71.6 101 41.6
C09p50080 Brassica napus HOM05D000347 ORTHO05D001997 2.8e-11 71.6 101 41.6
BolC9t57862H Brassica oleracea HOM05D005836 ORTHO05D007335 2.8e-11 71.6 101 41.6
AUR62003260 Chenopodium quinoa HOM05D005836 ORTHO05D007335 2.8e-11 71.6 97 42.3
Manes.15G179664 Manihot esculenta HOM05D005836 ORTHO05D007335 2.8e-11 71.6 48 72.9
Manes.15G179716 Manihot esculenta HOM05D005836 ORTHO05D007335 2.8e-11 71.6 48 72.9
A10p15970 Brassica napus HOM05D000347 ORTHO05D001997 3.7e-11 71.2 101 41.6
BraA10t43628Z Brassica rapa HOM05D005836 ORTHO05D007335 3.7e-11 71.2 101 41.6
THA.LOC104809827 Tarenaya hassleriana HOM05D005836 ORTHO05D007335 4.8e-11 70.9 48 70.8
C03p14500 Brassica napus HOM05D000347 ORTHO05D001997 1.1e-10 69.7 98 42.9
Pp3c13_24050 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.1e-10 69.7 43 67.4
Pp3c4_20840 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.1e-10 69.7 43 67.4
Pp3c4_20850 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.1e-10 69.7 43 67.4
SMO358G0359 Selaginella moellendorffii HOM05D005836 ORTHO05D007335 1.1e-10 69.7 47 70.2
EL10As13g24050 Beta vulgaris HOM05D005836 ORTHO05D007335 1.8e-10 68.9 95 42.1
SGA_v2.0_scaffold77G25340 Striga asiatica HOM05D005836 ORTHO05D007335 2.4e-10 68.6 104 40.4
Actinidia23823 Actinidia chinensis HOM05D005836 ORTHO05D007335 4.0e-10 67.8 39 84.6
Pp3c3_13470 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.2e-09 66.2 43 65.1
BcaB01g04547 Brassica carinata HOM05D005836 ORTHO05D007335 1.5e-09 65.9 43 72.1
BolC3t13893H Brassica oleracea HOM05D000347 ORTHO05D001997 1.5e-09 65.9 43 72.1
CAN.G297.12 Capsicum annuum HOM05D005836 ORTHO05D000001 1.5e-09 65.9 42 73.8
Hund16557 Selenicereus undatus HOM05D005836 ORTHO05D007335 2.0e-09 65.5 96 40.6
AagrBONN_evm.TU.Sc2ySwM_117.3281 Anthoceros agrestis HOM05D005836 ORTHO05D007335 7.6e-09 63.5 45 66.7
Mapoly0086s0004 Marchantia polymorpha HOM05D005836 ORTHO05D007335 4.9e-08 60.8 44 63.6
MBI15_g05585_MAGBIO Magnolia biondii HOM05D005836 ORTHO05D007335 2.5e-07 58.5 90 38.9
Peaxi162Scf00372g00721 Petunia axillaris HOM05D005836 ORTHO05D007335 3.5e-06 54.7 62 51.6


User provided reference genes

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