Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy38s012 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 1.5e-42 175.6 83 100.0
Aqoxy4G02030 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 1.5e-42 175.6 83 100.0
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 3.8e-41 171.0 83 97.6
Cfa023005 Carpinus fangiana HOM05D001966 ORTHO05D010986 2.5e-40 168.3 83 96.4
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 3.2e-40 167.9 83 96.4
CsaV3_UNG196500 Cucumis sativus L. HOM05D001966 ORTHO05D010986 2.7e-39 164.9 83 95.2
Sed0007694 Sechium edule HOM05D001966 ORTHO05D010986 2.7e-39 164.9 83 95.2
Sed0023467 Sechium edule HOM05D001966 ORTHO05D010986 2.7e-39 164.9 83 95.2
Sed0025793 Sechium edule HOM05D001966 ORTHO05D010986 2.7e-39 164.9 83 95.2
Cpa.g.sc23.86 Carica papaya HOM05D001966 ORTHO05D010986 2.2e-36 155.2 81 91.4
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 4.8e-36 154.1 79 92.4
Sed0001789 Sechium edule HOM05D001966 ORTHO05D010986 4.1e-35 151.0 77 94.8
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 2.6e-34 148.3 79 88.6
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 1.1e-29 132.9 79 83.5
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 3.3e-29 131.3 81 77.8
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 1.3e-28 129.4 79 82.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 3.7e-28 127.9 75 85.3
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 6.3e-28 127.1 63 95.2
CARHR282380 Cardamine hirsuta HOM05D001966 ORTHO05D010986 6.3e-28 127.1 63 95.2
CARHR282500 Cardamine hirsuta HOM05D001966 ORTHO05D010986 6.3e-28 127.1 63 95.2
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 8.2e-28 126.7 62 95.2
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 9.1e-27 123.2 62 93.5
arahy.Tifrunner.gnm1.ann1.LY649L Arachis hypogaea HOM05D001966 ORTHO05D010986 2.2e-25 118.6 59 93.2
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 2.9e-25 118.2 62 90.3
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.6e-23 112.5 54 98.1
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.6e-23 112.5 57 94.7
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 1.8e-22 109.0 70 75.7
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 3.0e-22 108.2 54 94.4
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 3.0e-22 108.2 54 94.4
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 3.0e-22 108.2 54 94.4
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 3.0e-22 108.2 54 94.4
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 2.0e-21 105.5 65 81.5
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 7.5e-21 103.6 52 92.3
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 7.5e-21 103.6 52 92.3
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 7.5e-21 103.6 52 92.3
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 3.7e-20 101.3 53 90.6
Peaxi162Scf00994g00002 Petunia axillaris HOM05D001966 ORTHO05D010986 3.7e-20 101.3 52 92.3
ClCG09G021430 Citrullus lanatus HOM05D001966 ORTHO05D010986 4.8e-20 100.9 54 90.7
CSS0015594 Camellia sinensis var. sinensis HOM05D001966 ORTHO05D010986 3.1e-19 98.2 63 77.8
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 7.0e-19 97.1 52 88.5
Nitab4.5_0004137g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.6e-18 95.9 71 70.4
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 2.9e-17 91.7 47 89.4
Nitab4.5_0001761g0140 Nicotiana tabacum HOM05D001966 ORTHO05D010986 8.5e-17 90.1 52 84.6
Nitab4.5_0001986g0110 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.2e-16 88.2 51 84.3
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 3.2e-16 88.2 52 80.8
Oeu041412.1 Olea europaea HOM05D001966 ORTHO05D010986 9.4e-16 86.7 52 80.8
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 1.0e-14 83.2 41 92.7
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.0e-14 83.2 41 92.7
arahy.Tifrunner.gnm1.ann1.X4EL03 Arachis hypogaea HOM05D001966 ORTHO05D010986 6.8e-14 80.5 47 83.0
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 2.0e-13 79.0 44 84.1
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 1.3e-12 76.3 40 87.5
Nitab4.5_0006502g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 2.2e-12 75.5 51 74.5
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 1.8e-11 72.4 36 94.4
Nitab4.5_0012234g0090 Nicotiana tabacum HOM05D001966 ORTHO05D010986 5.4e-11 70.9 45 80.0
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 7.0e-11 70.5 45 73.3
Psat7g093280 Pisum sativum HOM05D001966 ORTHO05D010986 2.0e-10 68.9 53 67.9
arahy.Tifrunner.gnm1.ann1.MCF6CI Arachis hypogaea HOM05D001966 ORTHO05D010986 5.9e-10 67.4 35 88.6
Nitab4.5_0009355g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010986 5.9e-10 67.4 46 76.1
Actinidia30703 Actinidia chinensis HOM05D001966 ORTHO05D009823 1.7e-09 65.9 72 58.3
Nitab4.5_0007400g0150 Nicotiana tabacum HOM05D001966 ORTHO05D010986 5.0e-09 64.3 51 64.7
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 6.5e-09 63.9 37 81.1
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 1.5e-08 62.8 65 56.9
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 1.5e-08 62.8 33 87.9
Lalb_Chr08g0236231 Lupinus albus HOM05D001966 ORTHO05D010986 1.2e-07 59.7 32 87.5
Lalb_Chr24g0400891 Lupinus albus HOM05D001966 ORTHO05D010986 1.2e-07 59.7 32 87.5
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.6e-07 59.3 55 61.8
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 2.1e-07 58.9 33 81.8
Peaxi162Scf00055g00164 Petunia axillaris HOM05D001966 ORTHO05D010986 1.4e-06 56.2 28 92.9
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 4.0e-06 54.7 28 89.3
Solyc02g043950.1 Solanum lycopersicum HOM05D001966 ORTHO05D010986 6.8e-06 53.9 54 55.6


User provided reference genes

Program Settings