Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00088 Aquilegia oxysepala HOM05D007286 ORTHO05D008955 1.1e-107 393.3 197 100.0
Aqoxy386s002 Aquilegia oxysepala HOM05D007286 ORTHO05D008955 1.1e-107 393.3 197 100.0
TAR555G0002 Trochodendron aralioides HOM05D007286 ORTHO05D008955 6.3e-34 148.3 192 42.7
PSO339G4644 Papaver somniferum HOM05D007286 ORTHO05D008955 2.9e-31 139.4 198 46.5
Nn7g37274 Nelumbo nucifera HOM05D007286 ORTHO05D008955 7.2e-30 134.8 195 44.6
PSO384G4662 Papaver somniferum HOM05D007286 ORTHO05D008955 2.3e-28 129.8 198 44.9
Dinv20486 Davidia involucrata HOM05D007286 ORTHO05D008955 2.2e-26 123.2 192 40.6
Potri.010G247100 Populus trichocarpa HOM05D007286 ORTHO05D008955 2.2e-26 123.2 193 38.3
GSVIVG01027344001 Vitis vinifera HOM05D007286 ORTHO05D008955 2.2e-26 123.2 192 39.1
QL04p050581 Quercus lobata HOM05D007286 ORTHO05D008955 2.8e-26 122.9 194 41.2
Sabra10G0192500 Salix brachista HOM05D007286 ORTHO05D008955 2.8e-26 122.9 196 37.8
Hma1.2p1_0233F.1_g097980 Hydrangea macrophylla HOM05D007286 ORTHO05D008955 1.1e-25 120.9 192 40.1
Ciclev10000662m.g Citrus clementina HOM05D007286 ORTHO05D008955 2.0e-24 116.7 192 38.5
MBI19_g06405_MAGBIO Magnolia biondii HOM05D007286 ORTHO05D008955 2.0e-24 116.7 199 40.2
MD02G1265200 Malus domestica HOM05D007286 ORTHO05D008955 8.5e-23 111.3 193 36.8
Sabra08G0007300 Salix brachista HOM05D007286 ORTHO05D008955 8.5e-23 111.3 193 37.3
Prupe.2G060300 Prunus persica HOM05D007286 ORTHO05D008955 1.1e-22 110.9 192 35.4
Actinidia12136 Actinidia chinensis HOM05D007286 ORTHO05D008955 1.4e-22 110.5 192 40.1
COL.COLO4_28923 Corchorus olitorius HOM05D007286 ORTHO05D008955 2.5e-22 109.8 195 37.9
Potri.008G012000 Populus trichocarpa HOM05D007286 ORTHO05D008955 3.2e-22 109.4 194 36.6
CSS0007228 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.6e-21 107.1 193 36.8
CSS0046865 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D008955 1.6e-21 107.1 193 36.8
CANSAT56G1680 Cannabis sativa HOM05D007286 ORTHO05D008955 2.1e-21 106.7 196 35.2
CANSAT56G4194 Cannabis sativa HOM05D007286 ORTHO05D008955 6.1e-21 105.1 196 35.2
PGR142G0126 Punica granatum HOM05D007286 ORTHO05D008955 1.1e-19 100.9 194 34.5
Manes.10G063001 Manihot esculenta HOM05D000188 ORTHO05D000362 1.5e-19 100.5 194 34.0
Rhsim07G0072400 Rhododendron simsii HOM05D007286 ORTHO05D008955 2.6e-19 99.8 197 37.6
RcHm_v2.0_Chr1g0331161 Rosa chinensis HOM05D007286 ORTHO05D008955 5.7e-19 98.6 193 35.2
ATR0307G001 Amborella trichopoda HOM05D007286 ORTHO05D008955 1.3e-18 97.4 194 39.7
Thecc.10G130100 Theobroma cacao HOM05D007286 ORTHO05D008955 1.3e-18 97.4 194 36.6
Peaxi162Scf00647g00320 Petunia axillaris HOM05D007286 ORTHO05D008955 6.3e-18 95.1 195 35.4
Atru.chr12.1143 Acer truncatum HOM05D007286 ORTHO05D008955 8.2e-18 94.7 192 33.9
vmacro13790 Vaccinium macrocarpon HOM05D007286 ORTHO05D008955 1.1e-17 94.4 198 37.4
vmacro23446 Vaccinium macrocarpon HOM05D007286 ORTHO05D008955 1.1e-17 94.4 198 37.4
Gohir.A05G285500 Gossypium hirsutum HOM05D007286 ORTHO05D008955 2.4e-17 93.2 193 34.7
FAN03G1022 Fragaria x ananassa HOM05D007286 ORTHO05D008955 3.1e-17 92.8 193 34.7
Gohir.D05G286600 Gossypium hirsutum HOM05D007286 ORTHO05D008955 3.1e-17 92.8 193 34.7
Gorai.009G301600 Gossypium raimondii HOM05D007286 ORTHO05D008955 5.3e-17 92.0 193 34.7
Nitab4.5_0001611g0060 Nicotiana tabacum HOM05D007286 ORTHO05D008955 1.2e-16 90.9 203 35.0
Phvul.011G187500 Phaseolus vulgaris HOM05D007286 ORTHO05D008955 1.2e-16 90.9 192 34.4
FAN06G0358 Fragaria x ananassa HOM05D007286 ORTHO05D008955 1.5e-16 90.5 193 34.2
FvH4_7g04960 Fragaria vesca HOM05D007286 ORTHO05D008955 2.0e-16 90.1 194 35.1
Cc07_g21350 Coffea canephora HOM05D007286 ORTHO05D008955 2.6e-16 89.7 195 34.4
Lsat_1_v5_gn_5_41960 Lactuca sativa HOM05D007286 ORTHO05D008955 3.5e-16 89.4 194 34.5
MSTRG.20479 Avicennia marina HOM05D007286 ORTHO05D008955 4.5e-16 89.0 193 36.3
FAN10G3167 Fragaria x ananassa HOM05D007286 ORTHO05D008955 4.5e-16 89.0 193 33.7
Nitab4.5_0005056g0090 Nicotiana tabacum HOM05D007286 ORTHO05D008955 1.3e-15 87.4 207 33.3
TWI38G1128 Tripterygium wilfordii HOM05D007286 ORTHO05D008955 1.3e-15 87.4 192 33.3
ECA246G2791 Erigeron canadensis HOM05D000076 ORTHO05D002730 1.7e-15 87.0 186 33.3
CDE04G1177 Ceratophyllum demersum HOM05D007286 ORTHO05D008955 2.2e-15 86.7 198 35.4
HanXRQChr07g0192711 Helianthus annuus HOM05D007286 ORTHO05D008955 2.2e-15 86.7 195 35.4
Os11g0129800 Oryza sativa ssp. japonica HOM05D007286 ORTHO05D008955 2.2e-15 86.7 206 33.5
Cfa010442 Carpinus fangiana HOM05D007286 ORTHO05D008955 3.8e-15 85.9 192 31.8
VMungo1127G2168 Vigna mungo HOM05D007286 ORTHO05D008955 3.8e-15 85.9 192 34.4
CiPaw.13G047300 Carya illinoinensis HOM05D007286 ORTHO05D008955 6.5e-15 85.1 192 30.7
TPR.G36317 Trifolium pratense HOM05D007286 ORTHO05D008955 6.5e-15 85.1 198 34.3
arahy.Tifrunner.gnm1.ann1.5NH7JH Arachis hypogaea HOM05D007286 ORTHO05D008955 8.5e-15 84.7 192 33.9
Glyma.15G221551 Glycine max HOM05D007286 ORTHO05D008955 8.5e-15 84.7 192 33.9
EL10Ac4g08793 Beta vulgaris HOM05D007286 ORTHO05D008955 1.1e-14 84.3 194 32.0
Lalb_Chr19g0132561 Lupinus albus HOM05D007286 ORTHO05D008955 2.5e-14 83.2 195 34.4
Medtr8g044120 Medicago truncatula HOM05D007286 ORTHO05D008955 2.5e-14 83.2 194 32.5
Duzib128G1558 Durio zibethinus HOM05D000138 ORTHO05D008955 5.5e-14 82.0 184 31.0
Psat4g141960 Pisum sativum HOM05D007286 ORTHO05D008955 5.5e-14 82.0 194 35.1
Hund06829 Selenicereus undatus HOM05D007286 ORTHO05D008955 7.2e-14 81.6 197 34.0
Glyma.08G227900 Glycine max HOM05D007286 ORTHO05D008955 1.6e-13 80.5 192 33.9
PGSC0003DMG401027501 Solanum tuberosum HOM05D007286 ORTHO05D008955 2.1e-13 80.1 195 32.3
Sc09g0004920 Simmondsia chinensis HOM05D007286 ORTHO05D008955 3.6e-13 79.3 192 31.8
CAN.G134.51 Capsicum annuum HOM05D007286 ORTHO05D008955 4.7e-13 79.0 194 30.4
Zm00001eb093550 Zea mays HOM05D007286 ORTHO05D008955 6.1e-13 78.6 208 32.7
Sopen01g040600 Solanum pennellii HOM05D007286 ORTHO05D008955 8.0e-13 78.2 196 33.2
Oeu013048.2 Olea europaea HOM05D007286 ORTHO05D008955 1.8e-12 77.0 209 32.5
CsaV3_5G034980 Cucumis sativus L. HOM05D007286 ORTHO05D008955 2.3e-12 76.6 194 30.4
arahy.Tifrunner.gnm1.ann1.VD1ICN Arachis hypogaea HOM05D007286 ORTHO05D008955 6.7e-12 75.1 192 31.2
Solyc01g096890.4 Solanum lycopersicum HOM05D007286 ORTHO05D008955 6.7e-12 75.1 200 31.5
Migut.B01162 Erythranthe guttata HOM05D007286 ORTHO05D008955 8.8e-12 74.7 193 34.2
MELO3C012308.2 Cucumis melo HOM05D007286 ORTHO05D008955 1.5e-11 73.9 196 28.6
Lj3g0009162 Lotus japonicus HOM05D007286 ORTHO05D008955 5.7e-11 72.0 194 33.5
HPP92_026687 Vanilla planifolia HOM05D007286 ORTHO05D008955 5.7e-11 72.0 191 31.4
Sed0010854 Sechium edule HOM05D007286 ORTHO05D008955 1.7e-10 70.5 194 32.5
ClCG05G022150 Citrullus lanatus HOM05D007286 ORTHO05D008955 3.7e-10 69.3 195 30.3
Eucgr.G02637 Eucalyptus grandis HOM05D007286 ORTHO05D008955 3.7e-10 69.3 192 26.0
SGA_v2.0_scaffold143G35713 Striga asiatica HOM05D007286 ORTHO05D008955 6.3e-10 68.6 193 32.6
HPP92_018000 Vanilla planifolia HOM05D007286 ORTHO05D008955 8.2e-10 68.2 194 31.4
Hma1.2p1_2056F.1_g312790 Hydrangea macrophylla HOM05D007286 ORTHO05D008955 1.4e-09 67.4 87 47.1
Ah.04g162700 Amaranthus hybridus HOM05D003625 ORTHO05D004382 2.4e-09 66.6 192 29.2
AUR62041274 Chenopodium quinoa HOM05D007286 ORTHO05D008955 4.1e-09 65.9 195 30.3
AUR62034104 Chenopodium quinoa HOM05D007286 ORTHO05D008955 1.2e-08 64.3 194 30.4
SalBow8G2801 Salvia bowleyana HOM05D007286 ORTHO05D008955 5.9e-08 62.0 82 43.9
Cpa.g.sc54.34 Carica papaya HOM05D007286 ORTHO05D008955 7.7e-08 61.6 59 57.6
Haze_03401 Corylus avellana HOM05D007286 ORTHO05D008955 2.9e-07 59.7 71 47.9
Ca_12172_v3 Cicer arietinum L. HOM05D007286 ORTHO05D008955 1.1e-06 57.8 58 56.9
SEGI_40207 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 7.2e-06 55.1 234 27.8


User provided reference genes

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