Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy377s001 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 1.5e-67 259.6 156 100.0
Aqoxy7G02787 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 6.5e-34 147.9 79 100.0
Nn7g36649 Nelumbo nucifera HOM05D005029 ORTHO05D006052 4.2e-17 92.0 77 63.6
TAR626G1810 Trochodendron aralioides HOM05D005029 ORTHO05D006052 1.6e-16 90.1 74 64.9
PSO063G5693 Papaver somniferum HOM05D005029 ORTHO05D006052 1.0e-15 87.4 60 71.7
Prupe.1G076300 Prunus persica HOM05D005029 ORTHO05D006052 2.0e-14 83.2 73 57.5
PSO170G2568 Papaver somniferum HOM05D005029 ORTHO05D006052 2.6e-14 82.8 60 68.3
Gohir.D13G213100 Gossypium hirsutum HOM05D005029 ORTHO05D006052 4.4e-14 82.0 75 58.7
Gorai.013G243400 Gossypium raimondii HOM05D005029 ORTHO05D006052 4.4e-14 82.0 75 58.7
MD16G1249500 Malus domestica HOM05D005029 ORTHO05D006052 5.7e-14 81.6 61 62.3
TAR383G0036 Trochodendron aralioides HOM05D005029 ORTHO05D006052 9.7e-14 80.9 74 60.8
MBI13_g01742_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 1.3e-13 80.5 75 54.7
CiPaw.08G032800 Carya illinoinensis HOM05D005029 ORTHO05D006052 1.7e-13 80.1 76 57.9
Gohir.A13G208700 Gossypium hirsutum HOM05D005029 ORTHO05D006052 2.2e-13 79.7 75 57.3
GSVIVG01010867001 Vitis vinifera HOM05D005029 ORTHO05D006052 3.7e-13 79.0 94 50.0
Dinv41171 Davidia involucrata HOM05D005029 ORTHO05D006052 6.3e-13 78.2 76 57.9
MBI19_g21652_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 8.2e-13 77.8 76 53.9
TWI32G0396 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 8.2e-13 77.8 71 56.3
Cfa013448 Carpinus fangiana HOM05D005029 ORTHO05D006052 1.1e-12 77.4 76 55.3
TWI34G0612 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 1.1e-12 77.4 75 54.7
CiPaw.07G196600 Carya illinoinensis HOM05D005029 ORTHO05D006052 2.4e-12 76.3 76 55.3
Nn2g14879 Nelumbo nucifera HOM05D005029 ORTHO05D006052 2.4e-12 76.3 76 60.5
Haze_22015 Corylus avellana HOM05D005029 ORTHO05D006052 3.1e-12 75.9 76 53.9
Cpa.g.c27842.2 Carica papaya HOM05D005029 ORTHO05D006052 1.6e-11 73.6 61 60.7
Potri.018G143000 Populus trichocarpa HOM05D005029 ORTHO05D006052 1.6e-11 73.6 73 56.2
Aa31LG2G20590 Aethionema arabicum HOM05D005029 ORTHO05D006052 2.0e-11 73.2 92 44.6
Dinv25437 Davidia involucrata HOM05D005029 ORTHO05D006052 2.0e-11 73.2 69 58.0
THA.LOC104803957 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 2.0e-11 73.2 59 54.2
THA.LOC104803983 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 2.0e-11 73.2 59 54.2
ATR0626G110 Amborella trichopoda HOM05D005029 ORTHO05D006052 2.6e-11 72.8 77 53.2
AL7G22280 Arabidopsis lyrata HOM05D005029 ORTHO05D006052 7.7e-11 71.2 71 50.7
AT4G29960 Arabidopsis thaliana HOM05D005029 ORTHO05D006052 7.7e-11 71.2 71 50.7
Manes.06G020200 Manihot esculenta HOM05D005029 ORTHO05D006052 7.7e-11 71.2 76 55.3
Ciclev10009010m.g Citrus clementina HOM05D005029 ORTHO05D006052 1.0e-10 70.9 80 51.2
Potri.006G075900 Populus trichocarpa HOM05D005029 ORTHO05D006052 1.0e-10 70.9 73 56.2
QL02p046501 Quercus lobata HOM05D005029 ORTHO05D006052 1.0e-10 70.9 79 51.9
RcHm_v2.0_Chr4g0399711 Rosa chinensis HOM05D005029 ORTHO05D006052 1.0e-10 70.9 77 50.6
Thecc.09G185600 Theobroma cacao HOM05D005029 ORTHO05D006052 1.0e-10 70.9 76 50.0
Sabra18G0116800 Salix brachista HOM05D005029 ORTHO05D006052 1.3e-10 70.5 81 53.1
Duzib170G0048 Durio zibethinus HOM05D005029 ORTHO05D006052 2.2e-10 69.7 75 48.0
CANSAT11G1104 Cannabis sativa HOM05D005029 ORTHO05D006052 5.0e-10 68.6 75 53.3
Atru.chr7.763 Acer truncatum HOM05D005029 ORTHO05D006052 8.5e-10 67.8 77 53.2
Atru.chr7.783 Acer truncatum HOM05D005029 ORTHO05D006052 8.5e-10 67.8 77 53.2
CSS0012939 Camellia sinensis var. sinensis HOM05D005029 ORTHO05D006052 8.5e-10 67.8 62 56.5
Ah.09g230060 Amaranthus hybridus HOM05D005029 ORTHO05D006052 1.1e-09 67.4 52 57.7
Ah.14g083530 Amaranthus hybridus HOM05D005029 ORTHO05D006052 1.9e-09 66.6 93 43.0
Carub.0007s1068 Capsella rubella HOM05D005029 ORTHO05D006052 1.9e-09 66.6 71 49.3
Thhalv10025919m.g Eutrema salsugineum HOM05D005029 ORTHO05D006052 1.9e-09 66.6 67 49.3
FAN07G2409 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.9e-09 66.6 68 51.5
vmacro20818 Vaccinium macrocarpon HOM05D005029 ORTHO05D006052 2.5e-09 66.2 54 57.4
Actinidia01279 Actinidia chinensis HOM05D005029 ORTHO05D006052 3.2e-09 65.9 72 51.4
COL.COLO4_08419 Corchorus olitorius HOM05D005029 ORTHO05D006052 3.2e-09 65.9 96 37.5
Duzib150G1033 Durio zibethinus HOM05D005029 ORTHO05D006052 4.2e-09 65.5 75 48.0
FAN22G0020 Fragaria x ananassa HOM05D005029 ORTHO05D006052 4.2e-09 65.5 68 50.0
arahy.Tifrunner.gnm1.ann1.K38ATV Arachis hypogaea HOM05D005029 ORTHO05D006052 5.5e-09 65.1 58 63.8
THA.LOC104814654 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 9.4e-09 64.3 77 45.5
MSTRG.26542 Avicennia marina HOM05D005029 ORTHO05D006052 1.6e-08 63.5 50 58.0
CARHR237880 Cardamine hirsuta HOM05D005029 ORTHO05D006052 1.6e-08 63.5 71 50.7
AUR62033261 Chenopodium quinoa HOM05D005029 ORTHO05D006052 2.1e-08 63.2 73 49.3
FAN17G0071 Fragaria x ananassa HOM05D005029 ORTHO05D006052 2.7e-08 62.8 74 47.3
AUR62021347 Chenopodium quinoa HOM05D005029 ORTHO05D006052 3.6e-08 62.4 73 49.3
Medtr2g037940 Medicago truncatula HOM05D005029 ORTHO05D006052 4.7e-08 62.0 61 50.8
FvH4_4g07340 Fragaria vesca HOM05D005029 ORTHO05D006052 6.1e-08 61.6 76 47.4
MELO3C017433.2 Cucumis melo HOM05D005029 ORTHO05D006052 8.0e-08 61.2 77 48.1
FAN12G1304 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.0e-07 60.8 76 47.4
Sp7g27770 Schrenkiella parvula HOM05D005029 ORTHO05D006052 1.0e-07 60.8 73 47.9
VMungo1309G1415 Vigna mungo HOM05D005029 ORTHO05D006052 1.8e-07 60.1 106 38.7
Eucgr.C00120 Eucalyptus grandis HOM05D005029 ORTHO05D006052 3.0e-07 59.3 76 51.3
Phvul.009G236500 Phaseolus vulgaris HOM05D005029 ORTHO05D006052 3.0e-07 59.3 77 46.8
EL10Ac8g18332 Beta vulgaris HOM05D005029 ORTHO05D006052 4.0e-07 58.9 74 44.6
Lj6g0016757 Lotus japonicus HOM05D005029 ORTHO05D006052 4.0e-07 58.9 63 55.6
SGA_v2.0_scaffold31G12759 Striga asiatica HOM05D005029 ORTHO05D006052 4.0e-07 58.9 75 48.0
Hund26310 Selenicereus undatus HOM05D005029 ORTHO05D006052 5.2e-07 58.5 74 44.6
Aa31LG8G16260 Aethionema arabicum HOM05D005029 ORTHO05D006052 1.2e-06 57.4 74 45.9
BolC3t21207H Brassica oleracea HOM05D005029 ORTHO05D006052 1.5e-06 57.0 70 47.1
DCAR_030818 Daucus carota HOM05D005029 ORTHO05D006052 1.5e-06 57.0 84 41.7
Sed0026503 Sechium edule HOM05D005029 ORTHO05D006052 1.5e-06 57.0 75 50.7
Glyma.15G165600 Glycine max HOM05D005029 ORTHO05D006052 2.0e-06 56.6 42 61.9
Glyma.09G059300 Glycine max HOM05D005029 ORTHO05D006052 2.6e-06 56.2 59 50.8
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 3.3e-06 55.8 68 47.1
Cc00_g10760 Coffea canephora HOM05D005029 ORTHO05D006052 4.4e-06 55.5 49 51.0
Lsat_1_v5_gn_3_137280 Lactuca sativa HOM05D005029 ORTHO05D006052 4.4e-06 55.5 85 45.9
HanXRQChr13g0426591 Helianthus annuus HOM05D005029 ORTHO05D006052 5.7e-06 55.1 63 47.6
Sc16g0010440 Simmondsia chinensis HOM05D005029 ORTHO05D006052 9.7e-06 54.3 53 52.8


User provided reference genes

Program Settings