Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy368s001 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 0.0e+00 1835.1 917 100.0
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 0.0e+00 1501.9 1042 77.6
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 1.6e-305 1052.7 1055 56.0
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 6.0e-305 1050.8 1048 56.1
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 7.3e-303 1043.9 1075 54.4
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 1.3e-302 1043.1 1040 55.7
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 3.6e-302 1041.6 1044 55.7
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 3.1e-301 1038.5 1050 54.5
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 5.8e-300 1034.2 1056 54.8
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 8.4e-299 1030.4 1051 54.7
TAR623G0474 Trochodendron aralioides HOM05D000764 ORTHO05D004953 8.4e-299 1030.4 699 75.1
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 5.3e-293 1011.1 1110 52.3
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 4.5e-292 1008.1 1053 53.5
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 1.3e-291 1006.5 1050 54.5
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 5.5e-290 1001.1 1056 54.5
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 1.8e-288 996.1 1050 53.3
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 3.3e-287 991.9 1057 52.4
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 5.3e-285 984.6 995 54.9
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 7.6e-284 980.7 1046 53.3
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 4.9e-283 978.0 1042 53.1
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 6.5e-283 977.6 1052 51.4
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 1.4e-282 976.5 1044 52.4
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 7.1e-282 974.2 1039 52.7
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.2e-281 973.4 1041 52.8
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 2.7e-281 972.2 1041 52.7
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 6.0e-281 971.1 1041 52.7
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 7.9e-281 970.7 1049 52.7
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.3e-280 969.9 1049 53.0
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 3.0e-280 968.8 1048 52.9
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 3.0e-280 968.8 1049 51.8
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 3.9e-280 968.4 1041 52.4
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 6.7e-280 967.6 1049 52.7
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 1.1e-279 966.8 1041 52.1
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 1.5e-279 966.5 1052 51.0
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 3.3e-279 965.3 1049 52.0
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 7.4e-279 964.1 1061 52.1
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 6.9e-277 957.6 1047 52.1
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 2.0e-276 956.1 1023 53.0
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 6.5e-275 951.0 1070 52.0
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 3.2e-274 948.7 1047 50.8
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 3.0e-272 942.2 1130 47.9
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 5.1e-272 941.4 1085 49.6
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 4.3e-271 938.3 1055 50.8
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 5.7e-271 937.9 1066 52.5
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 1.1e-269 933.7 1048 50.6
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 1.4e-269 933.3 1051 51.2
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 4.1e-269 931.8 1104 51.1
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 1.7e-267 926.4 1049 50.2
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 3.6e-265 918.7 1039 50.7
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 6.1e-265 917.9 1031 50.6
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 6.1e-265 917.9 1038 50.8
Cpa.g.sc119.44 Carica papaya HOM05D000764 ORTHO05D004953 1.0e-264 917.1 709 67.0
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 3.0e-264 915.6 1093 49.4
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 1.1e-263 913.7 1040 50.5
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 1.5e-263 913.3 1051 50.2
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 2.0e-263 912.9 1053 50.1
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 1.7e-262 909.8 1039 50.4
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 3.7e-262 908.7 1035 50.2
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 6.3e-262 907.9 1039 50.5
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 1.1e-261 907.1 1112 47.5
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 5.9e-260 901.4 1039 50.1
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 1.3e-259 900.2 1027 51.2
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 2.9e-259 899.0 1049 48.9
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 4.2e-258 895.2 1038 50.9
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 3.0e-256 889.0 1012 49.9
COL.COLO4_07280 Corchorus olitorius HOM05D000764 ORTHO05D004953 2.6e-255 885.9 707 67.2
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 4.8e-254 881.7 1027 50.1
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 4.8e-254 881.7 1050 49.2
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 1.1e-253 880.6 1040 49.8
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 2.4e-253 879.4 1006 49.3
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 1.6e-252 876.7 1010 49.5
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 2.0e-252 876.3 1012 49.1
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 2.9e-251 872.5 1028 49.6
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 2.9e-251 872.5 1072 48.1
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 1.5e-250 870.2 1007 49.4
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 2.5e-250 869.4 1041 48.9
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 7.2e-250 867.8 1008 49.0
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 2.1e-249 866.3 1023 48.8
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 2.1e-249 866.3 1008 49.2
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 8.0e-249 864.4 1008 49.1
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 2.3e-248 862.8 1019 50.0
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 6.3e-246 854.7 1009 48.2
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 6.3e-246 854.7 1009 48.2
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 1.6e-244 850.1 1009 47.9
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 3.8e-243 845.5 1026 47.0
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 1.6e-241 840.1 1134 46.1
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 6.3e-238 828.2 1058 46.4
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 1.4e-237 827.0 1002 47.9
AUR62019164 Chenopodium quinoa HOM05D000764 ORTHO05D004953 7.7e-236 821.2 744 58.6
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 2.3e-235 819.7 1018 47.2
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 2.1e-233 813.1 997 47.5
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 1.0e-232 810.8 1022 47.2
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 2.8e-230 802.7 1034 46.0
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 4.9e-230 802.0 1129 44.7
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 4.9e-222 775.4 1038 46.6
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 8.0e-217 758.1 1001 45.7
CDE10G0575 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 1.1e-216 757.7 699 59.4
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 1.7e-211 740.3 896 49.2
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 3.3e-210 736.1 1077 41.8
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 3.3e-210 736.1 1077 41.8
SalBow6G3750 Salvia bowleyana HOM05D000764 ORTHO05D004953 1.9e-205 720.3 1044 43.9
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 6.2e-201 705.3 843 48.3
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.8e-200 703.7 833 49.3
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 7.1e-181 638.6 837 46.4
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 2.7e-172 610.1 725 48.7
SHI31301 Sapria himalayana HOM05D000764 ORTHO05D004953 6.7e-171 605.5 737 48.8
Migut.L00371 Erythranthe guttata HOM05D000764 ORTHO05D004953 7.9e-164 582.0 429 67.6
vmacro06915 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 2.8e-153 547.0 840 43.3
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 2.5e-149 533.9 715 43.6
Os05g0447500 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 8.5e-142 508.8 501 56.3
Aqoxy6G02541 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 3.3e-138 496.9 285 90.9
Actinidia02700 Actinidia chinensis HOM05D000764 ORTHO05D004953 1.2e-132 478.4 320 72.5
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 8.6e-118 429.1 1078 30.8
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 1.1e-101 375.6 810 32.5
Actinidia02701 Actinidia chinensis HOM05D000764 ORTHO05D004953 5.8e-90 336.7 269 65.8
CiPaw.14G136600 Carya illinoinensis HOM05D000764 ORTHO05D004953 1.7e-81 308.5 246 64.6
VMungo1080G1023 Vigna mungo HOM05D000764 ORTHO05D004953 2.7e-79 301.2 188 77.1
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 2.6e-74 284.6 202 69.8
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 1.5e-66 258.8 921 27.5
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 4.0e-59 234.2 472 36.0
Dinv39954 Davidia involucrata HOM05D000764 ORTHO05D004953 1.9e-56 225.3 292 44.5
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 1.6e-55 222.2 732 27.5
CBR_g38308 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-44 184.5 929 24.2
Dinv39953 Davidia involucrata HOM05D000100 ORTHO05D000052 2.0e-37 162.2 123 70.7
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 5.5e-32 144.1 243 40.3
HPP92_009741 Vanilla planifolia HOM05D000764 ORTHO05D004953 3.0e-30 138.3 356 32.3
Migut.L00380 Erythranthe guttata HOM05D000764 ORTHO05D004953 5.1e-30 137.5 224 41.1
Nn1g03529 Nelumbo nucifera HOM05D000764 ORTHO05D004953 5.9e-26 124.0 72 72.2
CAN.G1237.22 Capsicum annuum HOM05D000764 ORTHO05D004953 2.2e-20 105.5 74 68.9
Psat5g238800 Pisum sativum HOM05D000764 ORTHO05D002785 4.8e-20 104.4 84 67.9
Psat5g238960 Pisum sativum HOM05D000764 ORTHO05D002785 4.8e-20 104.4 84 67.9
SHI31298 Sapria himalayana HOM05D000764 ORTHO05D004953 7.0e-19 100.5 61 73.8
Pp3c7_4610 Physcomitrium patens HOM05D000764 ORTHO05D004953 1.0e-17 96.7 567 20.8
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 3.8e-17 94.7 119 51.3
CDE10G0477 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 5.0e-17 94.4 65 66.2
Psat2g093280 Pisum sativum HOM05D002199 ORTHO05D007829 5.0e-17 94.4 108 53.7
CAN.G1237.46 Capsicum annuum HOM05D000764 ORTHO05D004953 1.2e-15 89.7 114 44.7
Sc16g0012210 Simmondsia chinensis HOM05D000764 ORTHO05D004953 3.8e-09 68.2 165 33.9
Cpa.g.sc119.45 Carica papaya HOM05D000764 ORTHO05D004953 1.2e-07 63.2 162 34.0
SHI31300 Sapria himalayana HOM05D000764 ORTHO05D004953 2.3e-06 58.9 39 71.8


User provided reference genes

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