Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G04162 Aquilegia oxysepala HOM05D005513 ORTHO05D006848 5.2e-176 620.9 309 100.0
TAR362G0948 Trochodendron aralioides HOM05D005513 ORTHO05D006848 5.1e-139 498.0 304 78.3
Nn7g37504 Nelumbo nucifera HOM05D005513 ORTHO05D006848 3.4e-135 485.3 300 78.0
Nitab4.5_0001936g0090 Nicotiana tabacum HOM05D005513 ORTHO05D006848 2.9e-134 482.3 305 76.4
Manes.05G132000 Manihot esculenta HOM05D005513 ORTHO05D006848 5.4e-133 478.0 300 76.0
Atru.chr4.1482 Acer truncatum HOM05D005513 ORTHO05D006848 1.6e-132 476.5 304 75.7
Ciclev10021262m.g Citrus clementina HOM05D005513 ORTHO05D006848 4.6e-132 474.9 304 75.3
Lalb_Chr16g0384361 Lupinus albus HOM05D005513 ORTHO05D006848 1.0e-131 473.8 303 75.6
PSO675G7310 Papaver somniferum HOM05D005513 ORTHO05D006848 1.3e-131 473.4 304 76.0
Duzib151G0764 Durio zibethinus HOM05D005513 ORTHO05D006848 2.3e-131 472.6 300 76.0
GSVIVG01038190001 Vitis vinifera HOM05D005513 ORTHO05D006848 3.0e-131 472.2 300 76.7
CANSAT56G3287 Cannabis sativa HOM05D005513 ORTHO05D006848 3.9e-131 471.9 309 74.4
Cfa015273 Carpinus fangiana HOM05D005513 ORTHO05D006848 3.9e-131 471.9 300 76.0
Nitab4.5_0008882g0020 Nicotiana tabacum HOM05D005513 ORTHO05D006848 8.6e-131 470.7 305 74.4
Sabra19G0110200 Salix brachista HOM05D005513 ORTHO05D006848 1.9e-130 469.5 309 73.8
CSS0036954 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 2.5e-130 469.2 300 75.7
Phvul.003G059600 Phaseolus vulgaris HOM05D005513 ORTHO05D006848 3.3e-130 468.8 303 75.2
TPR.G23516 Trifolium pratense HOM05D005513 ORTHO05D006848 3.3e-130 468.8 303 75.6
FAN26G1480 Fragaria x ananassa HOM05D005513 ORTHO05D006848 9.6e-130 467.2 306 73.9
Migut.F01838 Erythranthe guttata HOM05D005513 ORTHO05D006848 1.2e-129 466.8 301 74.4
Ca_18624_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 1.6e-129 466.5 303 74.3
TWI38G0850 Tripterygium wilfordii HOM05D005513 ORTHO05D006848 2.1e-129 466.1 303 73.9
Actinidia11441 Actinidia chinensis HOM05D005513 ORTHO05D006848 2.8e-129 465.7 312 74.0
Potri.019G099100 Populus trichocarpa HOM05D005513 ORTHO05D006848 2.8e-129 465.7 309 73.5
CiPaw.01G170000 Carya illinoinensis HOM05D005513 ORTHO05D006848 4.7e-129 464.9 300 73.3
Prupe.7G267200 Prunus persica HOM05D005513 ORTHO05D006848 4.7e-129 464.9 300 74.7
Peaxi162Scf00544g00118 Petunia axillaris HOM05D005513 ORTHO05D006848 6.2e-129 464.5 305 74.1
SalBow3G2273 Salvia bowleyana HOM05D005513 ORTHO05D006848 6.2e-129 464.5 311 73.3
VMungo0251G3259 Vigna mungo HOM05D005513 ORTHO05D006848 6.2e-129 464.5 303 74.6
FAN23G0174 Fragaria x ananassa HOM05D005513 ORTHO05D006848 1.1e-128 463.8 306 73.2
FvH4_1g00490 Fragaria vesca HOM05D005513 ORTHO05D006848 1.8e-128 463.0 306 72.2
Oeu057533.3 Olea europaea HOM05D005513 ORTHO05D006848 1.8e-128 463.0 340 67.9
PGSC0003DMG400004444 Solanum tuberosum HOM05D005513 ORTHO05D006848 1.8e-128 463.0 306 73.9
Thecc.04G162400 Theobroma cacao HOM05D005513 ORTHO05D006848 1.8e-128 463.0 300 76.3
Glyma.07G206300 Glycine max HOM05D005513 ORTHO05D006848 2.4e-128 462.6 302 73.8
RcHm_v2.0_Chr2g0085091 Rosa chinensis HOM05D005513 ORTHO05D006848 3.1e-128 462.2 300 75.0
Lj4g0013603 Lotus japonicus HOM05D005513 ORTHO05D006848 4.0e-128 461.8 304 73.7
Sopen12g019010 Solanum pennellii HOM05D005513 ORTHO05D006848 4.0e-128 461.8 308 73.4
PSO541G5416 Papaver somniferum HOM05D005513 ORTHO05D006848 6.8e-128 461.1 304 74.3
CAN.G575.118 Capsicum annuum HOM05D005513 ORTHO05D006848 8.9e-128 460.7 307 73.9
Cc09_g04220 Coffea canephora HOM05D005513 ORTHO05D006848 8.9e-128 460.7 300 74.0
Gohir.D10G121000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 8.9e-128 460.7 300 75.0
Gorai.011G132900 Gossypium raimondii HOM05D005513 ORTHO05D006848 8.9e-128 460.7 300 75.0
Medtr4g087590 Medicago truncatula HOM05D005513 ORTHO05D006848 8.9e-128 460.7 304 73.0
MSTRG.8188 Avicennia marina HOM05D005513 ORTHO05D006848 1.2e-127 460.3 300 74.0
Glyma.02G138700 Glycine max HOM05D005513 ORTHO05D006848 1.5e-127 459.9 303 73.6
Atru.chr4.1511 Acer truncatum HOM05D005587 ORTHO05D007287 2.0e-127 459.5 295 75.6
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea HOM05D005513 ORTHO05D006848 2.0e-127 459.5 305 72.8
vmacro15699 Vaccinium macrocarpon HOM05D005513 ORTHO05D006848 2.0e-127 459.5 311 72.7
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea HOM05D005513 ORTHO05D006848 4.4e-127 458.4 305 73.1
COL.COLO4_08197 Corchorus olitorius HOM05D005513 ORTHO05D006848 5.8e-127 458.0 310 73.9
PGR042G2305 Punica granatum HOM05D005513 ORTHO05D006848 5.8e-127 458.0 308 71.8
Gohir.A10G146000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 7.6e-127 457.6 300 74.3
Cpa.g.sc343.3 Carica papaya HOM05D005513 ORTHO05D006848 1.7e-126 456.4 300 74.3
QL10p057731 Quercus lobata HOM05D005513 ORTHO05D006848 2.2e-126 456.1 299 73.2
Sed0010820 Sechium edule HOM05D005513 ORTHO05D006848 2.9e-126 455.7 308 71.4
CAN.G1579.15 Capsicum annuum HOM05D005513 ORTHO05D006848 3.8e-126 455.3 307 73.3
CAN.G2177.12 Capsicum annuum HOM05D005513 ORTHO05D006848 3.8e-126 455.3 304 74.0
Psat7g119320 Pisum sativum HOM05D005513 ORTHO05D006848 3.8e-126 455.3 303 73.3
FAN28G1408 Fragaria x ananassa HOM05D005513 ORTHO05D006848 8.4e-126 454.1 326 68.1
Peaxi162Scf00544g00117 Petunia axillaris HOM05D005513 ORTHO05D006848 1.9e-125 453.0 304 72.0
Atru.BG.100.p Acer truncatum HOM05D005513 ORTHO05D006848 7.1e-125 451.1 283 77.0
AUR62002417 Chenopodium quinoa HOM05D005513 ORTHO05D006848 7.1e-125 451.1 308 70.5
CSS0028849 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 4.6e-124 448.4 282 77.3
AUR62023772 Chenopodium quinoa HOM05D005513 ORTHO05D006848 4.6e-124 448.4 308 70.5
EL10Ac3g06111 Beta vulgaris HOM05D005513 ORTHO05D006848 6.0e-124 448.0 300 72.3
Eucgr.L00024 Eucalyptus grandis HOM05D005513 ORTHO05D006848 6.0e-124 448.0 299 72.6
HanXRQChr10g0285921 Helianthus annuus HOM05D005513 ORTHO05D006848 2.3e-123 446.0 299 72.6
Sed0015185 Sechium edule HOM05D005513 ORTHO05D006848 6.6e-123 444.5 306 69.0
RhsimUnG0015400 Rhododendron simsii HOM05D005513 ORTHO05D006848 1.1e-122 443.7 334 67.7
ATR0743G005 Amborella trichopoda HOM05D005513 ORTHO05D006848 2.5e-122 442.6 300 71.0
MD15G1148400 Malus domestica HOM05D005513 ORTHO05D006848 2.5e-122 442.6 282 76.2
Ca_18630_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 3.3e-122 442.2 283 75.6
Lsat_1_v5_gn_2_40261 Lactuca sativa HOM05D005513 ORTHO05D006848 3.3e-122 442.2 335 66.3
CAN.G575.103 Capsicum annuum HOM05D005513 ORTHO05D006848 1.3e-121 440.3 306 71.2
QL10p057421 Quercus lobata HOM05D005513 ORTHO05D006848 2.1e-121 439.5 283 74.6
CsaV3_6G032350 Cucumis sativus L. HOM05D005513 ORTHO05D006848 1.5e-119 433.3 306 70.3
Zm00001eb037350 Zea mays HOM05D005513 ORTHO05D006848 2.6e-119 432.6 306 67.0
Rhsim02G0085900 Rhododendron simsii HOM05D005513 ORTHO05D006848 3.4e-119 432.2 352 64.2
Hund12358 Selenicereus undatus HOM05D005513 ORTHO05D006848 2.2e-118 429.5 317 65.9
Os08g0542600 Oryza sativa ssp. japonica HOM05D005513 ORTHO05D006848 6.4e-118 427.9 309 65.0
THA.LOC104801693 Tarenaya hassleriana HOM05D005513 ORTHO05D006848 1.4e-117 426.8 300 67.3
CAN.G2107.3 Capsicum annuum HOM05D005513 ORTHO05D006848 1.9e-117 426.4 279 76.3
ECA238G0802 Erigeron canadensis HOM05D005513 ORTHO05D006848 2.4e-117 426.0 288 71.5
Eucgr.G01603 Eucalyptus grandis HOM05D005513 ORTHO05D006848 2.4e-117 426.0 299 70.6
Lj6A199G41 Lonicera japonica HOM05D005513 ORTHO05D006848 1.6e-116 423.3 286 74.1
AL6G20970 Arabidopsis lyrata HOM05D005513 ORTHO05D006848 2.7e-116 422.5 299 67.9
HPP92_011686 Vanilla planifolia HOM05D005513 ORTHO05D006848 2.7e-116 422.5 300 68.0
Aa31LG3G16700 Aethionema arabicum HOM05D005513 ORTHO05D006848 3.5e-116 422.2 299 67.6
Sp6g32980 Schrenkiella parvula HOM05D005513 ORTHO05D006848 4.6e-116 421.8 304 66.1
Thhalv10014198m.g Eutrema salsugineum HOM05D005513 ORTHO05D006848 1.0e-115 420.6 304 66.4
HPP92_011691 Vanilla planifolia HOM05D005513 ORTHO05D006848 1.0e-115 420.6 300 67.7
Carub.0006s0894 Capsella rubella HOM05D005513 ORTHO05D006848 1.1e-114 417.2 300 67.0
AT5G10460 Arabidopsis thaliana HOM05D005513 ORTHO05D006848 1.5e-114 416.8 299 67.2
BcaB05g21485 Brassica carinata HOM05D005513 ORTHO05D006848 7.3e-114 414.5 305 65.6
C02p04480 Brassica napus HOM05D005513 ORTHO05D006848 7.3e-114 414.5 305 65.6
BraA02t05034Z Brassica rapa HOM05D005513 ORTHO05D006848 7.3e-114 414.5 305 65.6
A02p00500 Brassica napus HOM05D005513 ORTHO05D006848 1.3e-113 413.7 305 65.9
CARHR202830 Cardamine hirsuta HOM05D005513 ORTHO05D006848 1.3e-113 413.7 300 67.0
SEGI_26385 Sequoiadendron giganteum HOM05D005513 ORTHO05D006848 3.6e-113 412.1 309 61.2
BolC2t06408H Brassica oleracea HOM05D005513 ORTHO05D006848 1.4e-112 410.2 305 64.9
BcaC03g13313 Brassica carinata HOM05D005513 ORTHO05D006848 1.7e-110 403.3 305 64.6
Dinv33223 Davidia involucrata HOM05D005513 ORTHO05D006848 6.4e-110 401.4 250 78.8
MELO3C011447.2 Cucumis melo HOM05D005513 ORTHO05D006848 4.2e-109 398.7 345 60.3
Nitab4.5_0002604g0050 Nicotiana tabacum HOM05D005513 ORTHO05D006848 3.0e-107 392.5 298 67.1
Solyc12g038820.1 Solanum lycopersicum HOM05D005513 ORTHO05D006848 4.8e-105 385.2 251 75.7
Sc19g0006410 Simmondsia chinensis HOM05D005513 ORTHO05D006848 2.0e-103 379.8 250 72.4
SGA_v2.0_scaffold122G33215 Striga asiatica HOM05D005513 ORTHO05D006848 1.3e-102 377.1 338 58.9
CAN.G2075.11 Capsicum annuum HOM05D005513 ORTHO05D006848 1.1e-101 374.0 303 63.7
CAN.G575.78 Capsicum annuum HOM05D005513 ORTHO05D006848 5.5e-101 371.7 250 74.0
ClCG08G010170 Citrullus lanatus HOM05D005513 ORTHO05D006848 5.5e-101 371.7 308 61.7
Nitab4.5_0000241g0250 Nicotiana tabacum HOM05D005513 ORTHO05D006848 6.0e-100 368.2 259 70.7
SMO119G0305 Selaginella moellendorffii HOM05D005513 ORTHO05D006848 1.7e-94 350.1 301 55.5
Haze_01354 Corylus avellana HOM05D005513 ORTHO05D006848 5.0e-86 322.0 206 74.8
DCAR_005450 Daucus carota HOM05D005513 ORTHO05D006848 8.8e-83 311.2 209 72.7
Lj6A58T47 Lonicera japonica HOM05D005513 ORTHO05D006848 1.2e-79 300.8 202 74.3
CAN.G2075.13 Capsicum annuum HOM05D005513 ORTHO05D006848 3.4e-79 299.3 235 66.4
CAN.G181.20 Capsicum annuum HOM05D005513 ORTHO05D006848 3.3e-74 282.7 191 72.3
Medtr4g087600 Medicago truncatula HOM05D005513 ORTHO05D006848 9.7e-74 281.2 208 66.3
AUR62021707 Chenopodium quinoa HOM05D005513 ORTHO05D006848 9.1e-72 274.6 186 70.4
MCO04G248 Micromonas commoda HOM05D005513 ORTHO05D006848 9.1e-72 274.6 342 44.4
PRCOL_00005454 Prasinoderma coloniale HOM05D005513 ORTHO05D006848 1.8e-59 233.8 303 44.6
CAN.G1565.3 Capsicum annuum HOM05D005513 ORTHO05D006848 1.7e-54 217.2 307 42.0
Lj6A193T36 Lonicera japonica HOM05D005513 ORTHO05D006848 7.2e-53 211.8 174 66.1
Gorai.004G148900 Gossypium raimondii HOM05D005513 ORTHO05D006848 2.0e-50 203.8 150 68.7
CAN.G1703.16 Capsicum annuum HOM05D005513 ORTHO05D006848 4.1e-48 196.1 142 71.1
Cre14.g609300 Chlamydomonas reinhardtii HOM05D005513 ORTHO05D006848 1.2e-47 194.5 390 33.6
SHI25989 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-44 184.5 216 45.8
Lj6A58T48 Lonicera japonica HOM05D005513 ORTHO05D006848 3.2e-40 169.9 112 75.9
Cc00_g04390 Coffea canephora HOM05D005513 ORTHO05D006848 3.9e-38 162.9 117 65.0
Lj6A203T27 Lonicera japonica HOM05D005513 ORTHO05D006848 2.6e-34 150.2 100 72.0
CAN.G1703.15 Capsicum annuum HOM05D005513 ORTHO05D006848 1.3e-30 137.9 91 75.8
Lj6A203G20 Lonicera japonica HOM05D005513 ORTHO05D006848 3.4e-26 123.2 175 42.9
CAN.G12630.1 Capsicum annuum HOM05D005513 ORTHO05D006848 8.3e-25 118.6 79 73.4
Lj6C203G2 Lonicera japonica HOM05D005513 ORTHO05D006848 1.5e-21 107.8 77 72.7
EL10Ac7g16782 Beta vulgaris HOM05D005513 ORTHO05D006848 7.3e-21 105.5 67 71.6
RcHm_v2.0_Chr2g0085051 Rosa chinensis HOM05D005513 ORTHO05D343180 1.2e-20 104.8 85 63.5
Lj6A192T18 Lonicera japonica HOM05D005513 ORTHO05D006848 1.6e-12 77.8 56 66.1
Lj6A230T44 Lonicera japonica HOM05D005513 ORTHO05D006848 4.0e-11 73.2 52 73.1
SHI25987 Sapria himalayana HOM05D005513 ORTHO05D006848 1.3e-09 68.2 46 65.2
SHI25988 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-09 67.8 81 45.7


User provided reference genes

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