Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G04115 Aquilegia oxysepala HOM05D006262 ORTHO05D007266 3.9e-257 891.0 455 100.0
TAR362G0090 Trochodendron aralioides HOM05D006262 ORTHO05D007266 2.7e-112 409.8 459 53.8
Dinv22693 Davidia involucrata HOM05D006262 ORTHO05D007266 1.6e-104 384.0 418 52.6
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 5.6e-102 375.6 402 55.0
PSO675G4698 Papaver somniferum HOM05D006262 ORTHO05D007266 1.2e-101 374.4 456 49.6
CSS0049911 Camellia sinensis var. sinensis HOM05D006262 ORTHO05D007266 1.4e-100 370.9 418 51.4
Nn1g09825 Nelumbo nucifera HOM05D006262 ORTHO05D007266 1.5e-99 367.5 437 51.5
PSO017G4626 Papaver somniferum HOM05D006262 ORTHO05D007266 9.8e-99 364.8 391 52.9
MBI08_g33651_MAGBIO Magnolia biondii HOM05D006262 ORTHO05D007266 3.2e-97 359.8 400 52.2
HanXRQChr15g0494811 Helianthus annuus HOM05D006262 ORTHO05D007266 3.1e-92 343.2 435 45.7
Cfa015775 Carpinus fangiana HOM05D006262 ORTHO05D007266 3.2e-89 333.2 405 48.9
Ciclev10020134m.g Citrus clementina HOM05D006262 ORTHO05D007266 6.0e-88 328.9 406 48.3
Prupe.1G187900 Prunus persica HOM05D006262 ORTHO05D007266 1.0e-87 328.2 365 52.9
vmacro00601 Vaccinium macrocarpon HOM05D006262 ORTHO05D007266 1.9e-86 323.9 444 45.5
CANSAT78G0581 Cannabis sativa HOM05D006262 ORTHO05D007266 4.3e-86 322.8 375 50.9
PGSC0003DMG400021613 Solanum tuberosum HOM05D006262 ORTHO05D007266 5.6e-86 322.4 433 46.7
Atru.chr3.1601 Acer truncatum HOM05D006262 ORTHO05D007266 7.3e-86 322.0 431 46.4
Atru.chr3.1609 Acer truncatum HOM05D006262 ORTHO05D007266 7.3e-86 322.0 431 46.4
ATR0743G268 Amborella trichopoda HOM05D006262 ORTHO05D007266 2.1e-85 320.5 434 45.9
PGR142G3389 Punica granatum HOM05D006262 ORTHO05D007266 8.1e-85 318.5 458 45.4
Thecc.05G002700 Theobroma cacao HOM05D006262 ORTHO05D007266 8.9e-84 315.1 432 47.5
MD04G1038000 Malus domestica HOM05D006262 ORTHO05D007266 2.0e-83 313.9 367 49.9
RcHm_v2.0_Chr4g0407651 Rosa chinensis HOM05D006262 ORTHO05D007266 3.4e-83 313.2 394 48.2
Sopen09g036450 Solanum pennellii HOM05D006262 ORTHO05D007266 9.9e-83 311.6 410 45.4
Cc03_g13170 Coffea canephora HOM05D006262 ORTHO05D007266 1.3e-82 311.2 401 46.6
ECA238G4140 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.7e-82 310.8 402 44.8
DCAR_023918 Daucus carota HOM05D006262 ORTHO05D007266 3.8e-82 309.7 408 45.1
COL.COLO4_14416 Corchorus olitorius HOM05D006262 ORTHO05D007266 4.9e-82 309.3 412 46.1
Solyc09g098530.4 Solanum lycopersicum HOM05D006262 ORTHO05D007266 4.9e-82 309.3 470 42.1
FvH4_4g11340 Fragaria vesca HOM05D006262 ORTHO05D007266 8.4e-82 308.5 447 43.4
Potri.007G124600 Populus trichocarpa HOM05D006262 ORTHO05D007266 1.1e-81 308.1 453 44.6
Rhsim09G0030700 Rhododendron simsii HOM05D006262 ORTHO05D007266 1.9e-81 307.4 422 46.4
QL10p047365 Quercus lobata HOM05D006262 ORTHO05D007266 1.6e-80 304.3 452 44.2
Lj3A232G38 Lonicera japonica HOM05D006262 ORTHO05D007266 7.8e-80 302.0 401 44.9
Manes.04G048800 Manihot esculenta HOM05D006262 ORTHO05D007266 1.0e-79 301.6 418 44.7
Carub.0004s2570 Capsella rubella HOM05D006262 ORTHO05D007266 6.6e-79 298.9 406 43.1
ClCG07G015820 Citrullus lanatus HOM05D006262 ORTHO05D007266 6.6e-79 298.9 437 44.6
Lsat_1_v5_gn_2_51881 Lactuca sativa HOM05D006262 ORTHO05D007266 6.6e-79 298.9 445 42.7
MELO3C017699.2 Cucumis melo HOM05D006262 ORTHO05D007266 1.1e-78 298.1 443 44.0
Sed0004128 Sechium edule HOM05D006262 ORTHO05D007266 1.5e-78 297.7 443 44.5
AL4G41890 Arabidopsis lyrata HOM05D006262 ORTHO05D007266 1.9e-78 297.4 403 42.9
BcaB01g03403 Brassica carinata HOM05D006262 ORTHO05D007266 2.5e-78 297.0 451 42.1
Lalb_Chr02g0144321 Lupinus albus HOM05D006262 ORTHO05D007266 4.3e-78 296.2 441 42.2
Sc13g0007690 Simmondsia chinensis HOM05D006262 ORTHO05D007266 5.6e-78 295.8 421 45.4
Thhalv10001453m.g Eutrema salsugineum HOM05D006262 ORTHO05D007266 7.3e-78 295.4 424 42.9
Duzib093G0344 Durio zibethinus HOM05D006262 ORTHO05D007266 2.1e-77 293.9 430 44.7
CsaV3_4G003530 Cucumis sativus L. HOM05D006262 ORTHO05D007266 3.6e-77 293.1 439 44.0
AT2G43235 Arabidopsis thaliana HOM05D006262 ORTHO05D007266 1.4e-76 291.2 468 40.4
Aa31LG1G25040 Aethionema arabicum HOM05D006262 ORTHO05D007266 1.8e-76 290.8 472 40.9
BraA03t11623Z Brassica rapa HOM05D006262 ORTHO05D007266 2.4e-76 290.4 453 43.3
A03p24130 Brassica napus HOM05D006262 ORTHO05D007266 9.0e-76 288.5 453 42.4
Eucgr.A00253 Eucalyptus grandis HOM05D006262 ORTHO05D007266 9.0e-76 288.5 333 51.1
HPP92_024424 Vanilla planifolia HOM05D006262 ORTHO05D007266 2.0e-75 287.3 402 43.3
Ah.07g204100 Amaranthus hybridus HOM05D006262 ORTHO05D007266 2.6e-75 287.0 387 43.4
EL10Ac3g06302 Beta vulgaris HOM05D006262 ORTHO05D007266 4.4e-75 286.2 439 41.2
Sabra07G0100700 Salix brachista HOM05D006262 ORTHO05D002297 5.8e-75 285.8 443 42.4
Sp4g25360 Schrenkiella parvula HOM05D006262 ORTHO05D007266 5.8e-75 285.8 457 40.5
C03p28720 Brassica napus HOM05D006262 ORTHO05D007266 7.6e-75 285.4 455 41.3
TWI63G1082 Tripterygium wilfordii HOM05D006262 ORTHO05D007266 9.9e-75 285.0 421 44.4
Glyma.20G245900 Glycine max HOM05D006262 ORTHO05D007266 1.3e-74 284.6 430 42.3
CARHR138310 Cardamine hirsuta HOM05D006262 ORTHO05D007266 2.9e-74 283.5 465 40.0
Gohir.D04G136100 Gossypium hirsutum HOM05D006262 ORTHO05D007266 2.9e-74 283.5 367 46.6
MSTRG.24585 Avicennia marina HOM05D006262 ORTHO05D007266 6.4e-74 282.3 432 44.2
BcaC01g05249 Brassica carinata HOM05D006262 ORTHO05D007266 8.4e-74 282.0 455 41.1
BolC3t15234H Brassica oleracea HOM05D006262 ORTHO05D007266 1.9e-73 280.8 455 41.1
Gohir.A04G096300 Gossypium hirsutum HOM05D006262 ORTHO05D007266 1.9e-73 280.8 367 46.6
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea HOM05D006262 ORTHO05D007266 5.4e-73 279.3 399 43.4
Migut.N03113 Erythranthe guttata HOM05D006262 ORTHO05D007266 2.7e-72 276.9 422 44.8
Gorai.012G119900 Gossypium raimondii HOM05D006262 ORTHO05D007266 2.7e-72 276.9 367 46.0
Hund22599 Selenicereus undatus HOM05D006262 ORTHO05D007266 6.0e-72 275.8 432 41.9
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea HOM05D006262 ORTHO05D007266 1.7e-71 274.2 356 46.1
VMungo0720G2273 Vigna mungo HOM05D006262 ORTHO05D007266 3.9e-71 273.1 468 39.3
Phvul.007G004000 Phaseolus vulgaris HOM05D006262 ORTHO05D007266 1.5e-70 271.2 429 39.4
CDE09G0849 Ceratophyllum demersum HOM05D006262 ORTHO05D007266 9.6e-70 268.5 299 51.8
Medtr1g116540 Medicago truncatula HOM05D006262 ORTHO05D007266 9.6e-70 268.5 436 40.8
Ca_29592_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 1.6e-69 267.7 452 40.7
Lj5g0018354 Lotus japonicus HOM05D006262 ORTHO05D007266 2.1e-69 267.3 403 40.7
GSVIVG01013579001 Vitis vinifera HOM05D006262 ORTHO05D007266 8.1e-69 265.4 229 61.1
TPR.G10421 Trifolium pratense HOM05D006262 ORTHO05D007266 7.6e-67 258.8 450 37.8
Os05g0299200 Oryza sativa ssp. japonica HOM05D006262 ORTHO05D007266 1.2e-64 251.5 370 41.4
Oeu029569.3 Olea europaea HOM05D006262 ORTHO05D007266 6.7e-63 245.7 512 37.3
Haze_00720 Corylus avellana HOM05D006262 ORTHO05D007266 5.6e-62 242.7 505 35.6
SalBow6G1208 Salvia bowleyana HOM05D006262 ORTHO05D007266 5.6e-62 242.7 440 38.4
unitig_27.g25149 Utricularia gibba HOM05D006262 ORTHO05D007266 1.1e-60 238.4 367 41.1
Zm00001eb350760 Zea mays HOM05D006262 ORTHO05D007266 2.4e-60 237.3 370 40.3
Psat6g241480 Pisum sativum HOM05D006262 ORTHO05D007266 2.6e-59 233.8 446 37.4
SEGI_17174 Sequoiadendron giganteum HOM05D006262 ORTHO05D007266 1.7e-58 231.1 421 36.6
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05D006262 ORTHO05D007266 8.2e-53 212.2 405 35.8
Mapoly0004s0159 Marchantia polymorpha HOM05D006262 ORTHO05D007266 2.9e-50 203.8 400 34.5
AUR62030023 Chenopodium quinoa HOM05D006262 ORTHO05D007266 4.6e-48 196.4 388 35.6
AUR62002605 Chenopodium quinoa HOM05D006262 ORTHO05D007266 2.3e-47 194.1 388 35.8
CiPaw.01G102600 Carya illinoinensis HOM05D006262 ORTHO05D007266 5.1e-47 193.0 312 40.4
Ca_11400_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 5.1e-47 193.0 452 36.5
Ca_11403_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 5.1e-47 193.0 451 36.6
Peaxi162Scf00286g00119 Petunia axillaris HOM05D006262 ORTHO05D007266 2.2e-45 187.6 168 58.3
Nitab4.5_0002908g0080 Nicotiana tabacum HOM05D006262 ORTHO05D007266 6.3e-45 186.0 161 60.9
Nitab4.5_0001049g0110 Nicotiana tabacum HOM05D006262 ORTHO05D007266 6.9e-44 182.6 161 59.6
SMO351G0235 Selaginella moellendorffii HOM05D006262 ORTHO05D007266 2.9e-42 177.2 289 39.4
Pp3c12_3930 Physcomitrium patens HOM05D006262 ORTHO05D007266 1.2e-40 171.8 464 32.1
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 6.7e-39 166.0 130 68.5
Pp3c9_3680 Physcomitrium patens HOM05D006262 ORTHO05D007266 8.2e-37 159.1 382 30.6
SGA_v2.0_scaffold31G12573 Striga asiatica HOM05D006262 ORTHO05D007266 8.8e-31 139.0 420 30.0
Hma1.2p1_0597F.1_g186440 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 2.8e-29 134.0 215 42.3
Nitab4.5_0001049g0100 Nicotiana tabacum HOM05D006262 ORTHO05D007266 6.5e-26 122.9 229 38.4
Nitab4.5_0002908g0070 Nicotiana tabacum HOM05D006262 ORTHO05D007266 8.5e-26 122.5 235 36.2
Cpa.g.sc71.28 Carica papaya HOM05D006262 ORTHO05D007266 5.7e-22 109.8 310 30.6
Peaxi162Scf00286g10017 Petunia axillaris HOM05D006262 ORTHO05D007266 1.8e-20 104.8 284 33.1
Cpa.g.sc71.30 Carica papaya HOM05D006262 ORTHO05D007266 1.2e-19 102.1 80 67.5
MCO03G554 Micromonas commoda HOM05D006262 ORTHO05D007266 5.0e-18 96.7 294 29.3
FAN17G0796 Fragaria x ananassa HOM05D006262 ORTHO05D007266 3.2e-17 94.0 81 60.5
Cre01.g049900 Chlamydomonas reinhardtii HOM05D006262 ORTHO05D007266 4.7e-16 90.1 332 26.8
PRCOL_00005486 Prasinoderma coloniale HOM05D006262 ORTHO05D007266 8.8e-15 85.9 280 27.9
QL09p046233 Quercus lobata HOM05D006262 ORTHO05D007266 7.5e-14 82.8 83 59.0
CAN.G688.4 Capsicum annuum HOM05D006262 ORTHO05D007266 4.8e-13 80.1 75 53.3
FvH4_c17g00080 Fragaria vesca HOM05D006262 ORTHO05D007266 1.1e-09 68.9 49 69.4
FAN07G2249 Fragaria x ananassa HOM05D006262 ORTHO05D007266 1.1e-09 68.9 46 71.7
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 2.1e-08 64.7 73 50.7
CAN.G51.2 Capsicum annuum HOM05D006262 ORTHO05D007266 1.0e-07 62.4 75 45.3
GSVIVG01020265001 Vitis vinifera HOM05D006262 ORTHO05D007266 3.0e-07 60.8 116 34.5


User provided reference genes

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