Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G04113 Aquilegia oxysepala HOM05D005971 ORTHO05D007459 0.0e+00 2124.0 1042 100.0
TAR626G0017 Trochodendron aralioides HOM05D005971 ORTHO05D007459 0.0e+00 1179.9 1031 57.9
PSO675G3107 Papaver somniferum HOM05D005971 ORTHO05D007459 2.1e-306 1055.8 1017 53.0
PSO017G5934 Papaver somniferum HOM05D005971 ORTHO05D007459 7.1e-302 1040.8 1024 51.8
Dinv19623 Davidia involucrata HOM05D005971 ORTHO05D007459 1.1e-299 1033.5 1024 53.1
CSS0033662 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 4.8e-282 974.9 995 51.5
Actinidia35435 Actinidia chinensis HOM05D005971 ORTHO05D007459 2.1e-277 959.5 1027 50.1
Potri.001G457550 Populus trichocarpa HOM05D005971 ORTHO05D007459 1.0e-276 957.2 1021 49.1
CSS0049989 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 1.6e-274 949.9 995 50.6
Sabra16G0310100 Salix brachista HOM05D005971 ORTHO05D007459 4.6e-269 931.8 1030 48.8
Cfa019419 Carpinus fangiana HOM05D005971 ORTHO05D007459 1.6e-266 923.3 1003 50.0
Lj1C905G3 Lonicera japonica HOM05D005971 ORTHO05D007459 3.1e-265 919.1 1027 48.6
QL04p073974 Quercus lobata HOM05D005971 ORTHO05D007459 5.5e-262 908.3 1050 47.9
Atru.chr12.2184 Acer truncatum HOM05D005971 ORTHO05D007459 2.8e-258 896.0 1015 47.2
Ciclev10018677m.g Citrus clementina HOM05D005971 ORTHO05D007459 2.8e-258 896.0 1013 45.2
CANSAT80G2256 Cannabis sativa HOM05D005971 ORTHO05D007459 1.2e-256 890.6 1023 46.4
RcHm_v2.0_Chr5g0026671 Rosa chinensis HOM05D005971 ORTHO05D007459 2.9e-255 885.9 1020 46.1
FvH4_3g15860 Fragaria vesca HOM05D005971 ORTHO05D007459 3.9e-252 875.5 1023 45.4
FAN11G3334 Fragaria x ananassa HOM05D005971 ORTHO05D007459 8.7e-252 874.4 1006 45.8
MD05G1219300 Malus domestica HOM05D005971 ORTHO05D007459 7.4e-251 871.3 1013 46.4
FAN16G0465 Fragaria x ananassa HOM05D005971 ORTHO05D007459 4.8e-250 868.6 1006 46.0
Duzib268G0338 Durio zibethinus HOM05D005971 ORTHO05D007459 5.0e-247 858.6 1013 45.6
Sopen10g001570 Solanum pennellii HOM05D005971 ORTHO05D007459 4.2e-246 855.5 1024 45.8
PGR031G0315 Punica granatum HOM05D005971 ORTHO05D007459 6.3e-242 841.6 1032 44.2
Migut.M01561 Erythranthe guttata HOM05D005971 ORTHO05D007459 1.8e-241 840.1 1017 45.6
Peaxi162Scf00267g01016 Petunia axillaris HOM05D005971 ORTHO05D007459 3.1e-241 839.3 1015 45.3
CAN.G492.69 Capsicum annuum HOM05D005971 ORTHO05D007459 3.3e-235 819.3 1025 43.7
TWI39G0032 Tripterygium wilfordii HOM05D005971 ORTHO05D007459 2.2e-234 816.6 1013 44.5
Gorai.013G178300 Gossypium raimondii HOM05D005971 ORTHO05D007459 1.3e-231 807.4 1015 43.7
THA.LOC104822751 Tarenaya hassleriana HOM05D005971 ORTHO05D007459 1.3e-231 807.4 1015 43.3
Nitab4.5_0000611g0060 Nicotiana tabacum HOM05D005971 ORTHO05D007459 1.6e-229 800.4 995 44.3
Cc05_g16010 Coffea canephora HOM05D005971 ORTHO05D007459 4.0e-228 795.8 1029 43.4
GSVIVG01020430001 Vitis vinifera HOM05D005971 ORTHO05D007459 6.3e-226 788.5 939 45.6
AT1G04390 Arabidopsis thaliana HOM05D005971 ORTHO05D007459 1.8e-225 786.9 1023 42.6
Carub.0001s0356 Capsella rubella HOM05D005971 ORTHO05D007459 4.1e-225 785.8 1024 42.5
ClCG11G016380 Citrullus lanatus HOM05D005971 ORTHO05D007459 5.3e-225 785.4 1020 42.0
arahy.Tifrunner.gnm1.ann1.MUD8D6 Arachis hypogaea HOM05D005971 ORTHO05D007459 7.0e-225 785.0 1031 41.5
Glyma.15G255000 Glycine max HOM05D005971 ORTHO05D007459 1.2e-224 784.3 1034 41.3
Aa31LG1G20480 Aethionema arabicum HOM05D005971 ORTHO05D007459 4.5e-224 782.3 1021 41.3
Solyc10g005600.4 Solanum lycopersicum HOM05D005971 ORTHO05D007459 2.2e-223 780.0 1034 42.4
Oeu052011.1 Olea europaea HOM05D005971 ORTHO05D007459 3.8e-223 779.2 1018 42.9
AL1G14000 Arabidopsis lyrata HOM05D005971 ORTHO05D007459 8.5e-223 778.1 1023 42.3
EL10Ac2g03354 Beta vulgaris HOM05D005971 ORTHO05D007459 8.5e-223 778.1 1026 41.4
Lalb_Chr25g0285011 Lupinus albus HOM05D005971 ORTHO05D007459 8.5e-223 778.1 1024 41.9
Phvul.005G056400 Phaseolus vulgaris HOM05D005971 ORTHO05D007459 2.5e-222 776.5 1018 41.5
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 9.4e-222 774.6 1014 41.6
Manes.14G015836 Manihot esculenta HOM05D005971 ORTHO05D007459 1.8e-220 770.4 848 46.0
TPR.G9756 Trifolium pratense HOM05D005971 ORTHO05D007459 2.3e-220 770.0 1033 40.6
Ah.06g185720 Amaranthus hybridus HOM05D005971 ORTHO05D007459 4.0e-220 769.2 1036 40.6
Nn7g37820 Nelumbo nucifera HOM05D005971 ORTHO05D007459 8.8e-220 768.1 833 50.1
Ca_03684_v3 Cicer arietinum L. HOM05D005971 ORTHO05D007459 1.5e-219 767.3 1032 40.8
MBI02_g40085_MAGBIO Magnolia biondii HOM05D005971 ORTHO05D007459 2.2e-218 763.5 862 48.0
SGA_v2.0_scaffold7G03577 Striga asiatica HOM05D005971 ORTHO05D007459 8.3e-218 761.5 1012 42.7
Lj3g0007743 Lotus japonicus HOM05D005971 ORTHO05D007459 1.1e-217 761.1 1029 40.6
Medtr2g069560 Medicago truncatula HOM05D005971 ORTHO05D007459 7.7e-216 755.0 1049 40.0
Psat1g011400 Pisum sativum HOM05D005971 ORTHO05D007459 8.6e-215 751.5 1045 39.8
BolC5t29039H Brassica oleracea HOM05D005971 ORTHO05D007459 1.5e-214 750.7 1024 40.6
Nitab4.5_0004488g0030 Nicotiana tabacum HOM05D005971 ORTHO05D007459 4.2e-214 749.2 1016 42.0
vmacro09786 Vaccinium macrocarpon HOM05D005971 ORTHO05D007459 7.2e-214 748.4 1024 42.6
A10p02830 Brassica napus HOM05D005971 ORTHO05D007459 4.7e-213 745.7 1024 40.8
C05p02580 Brassica napus HOM05D005971 ORTHO05D007459 1.8e-212 743.8 1024 40.5
Rhsim04G0005800 Rhododendron simsii HOM05D005971 ORTHO05D007459 2.6e-211 740.0 1147 39.7
Prupe.4G140600 Prunus persica HOM05D005971 ORTHO05D007459 9.8e-211 738.0 965 43.6
ECA240G1928 Erigeron canadensis HOM05D005971 ORTHO05D007459 1.3e-210 737.6 1005 40.9
HanXRQChr05g0160991 Helianthus annuus HOM05D005971 ORTHO05D007459 1.6e-205 720.7 1024 40.7
SalBow8G3201 Salvia bowleyana HOM05D005971 ORTHO05D007459 8.0e-205 718.4 1014 41.5
Lsat_1_v5_gn_7_71401 Lactuca sativa HOM05D005971 ORTHO05D007459 5.2e-204 715.7 1035 40.3
GSVIVG01020427001 Vitis vinifera HOM05D005971 ORTHO05D007459 2.3e-199 700.3 942 41.8
DCAR_009638 Daucus carota HOM05D005971 ORTHO05D007459 3.3e-198 696.4 952 41.9
Sed0013026 Sechium edule HOM05D005971 ORTHO05D007459 2.8e-197 693.3 938 41.7
Atru.chr12.2179 Acer truncatum HOM05D005971 ORTHO05D007459 2.2e-194 683.7 761 47.3
BraA10t42550Z Brassica rapa HOM05D005971 ORTHO05D007459 3.7e-186 656.4 1011 37.1
AUR62038398 Chenopodium quinoa HOM05D005971 ORTHO05D007459 8.6e-183 645.2 1030 36.5
Thecc.07G154200 Theobroma cacao HOM05D005971 ORTHO05D007459 2.5e-182 643.7 820 43.8
Eucgr.F03182 Eucalyptus grandis HOM05D005971 ORTHO05D007459 4.9e-178 629.4 755 45.4
ATR0165G004 Amborella trichopoda HOM05D005971 ORTHO05D007459 8.4e-178 628.6 1015 37.5
FAN21G1476 Fragaria x ananassa HOM05D005971 ORTHO05D007459 1.1e-177 628.2 1005 37.3
Sc06g0001560 Simmondsia chinensis HOM05D005971 ORTHO05D007459 2.3e-175 620.5 761 44.0
Thhalv10006788m.g Eutrema salsugineum HOM05D005971 ORTHO05D007459 5.6e-174 615.9 1017 36.8
Hund12466 Selenicereus undatus HOM05D005971 ORTHO05D007459 1.6e-173 614.4 878 38.7
Hma1.2p1_0637F.1_g193590 Hydrangea macrophylla HOM05D005971 ORTHO05D007459 3.2e-161 573.5 1077 36.9
MELO3C010564.2 Cucumis melo HOM05D005971 ORTHO05D007459 6.4e-154 549.3 1008 34.2
VMungo1080G0173 Vigna mungo HOM05D005971 ORTHO05D007459 2.7e-152 543.9 842 37.8
Sp1g03210 Schrenkiella parvula HOM05D005971 ORTHO05D007459 8.7e-151 538.9 725 40.4
CARHR003720 Cardamine hirsuta HOM05D005971 ORTHO05D007459 2.8e-149 533.9 723 40.7
Cpa.g.sc10.37 Carica papaya HOM05D005971 ORTHO05D007459 5.7e-142 509.6 804 38.6
CDE12G0091 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 3.9e-135 486.9 761 36.9
PGSC0003DMG402011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 5.0e-130 469.9 587 44.8
Gohir.D13G157500 Gossypium hirsutum HOM05D005971 ORTHO05D007459 4.1e-124 450.3 569 43.4
Zm00001eb273960 Zea mays HOM05D005971 ORTHO05D007459 2.3e-119 434.5 884 32.1
PGSC0003DMG401011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 3.8e-106 390.6 436 46.3
Gohir.A13G153066 Gossypium hirsutum HOM05D005971 ORTHO05D007459 1.9e-105 388.3 432 46.5
Mapoly0060s0028 Marchantia polymorpha HOM05D005971 ORTHO05D007459 2.5e-97 361.3 991 28.4
Pp3c6_21780 Physcomitrium patens HOM05D005971 ORTHO05D007459 1.6e-91 342.0 1050 27.2
Gohir.A13G153099 Gossypium hirsutum HOM05D005971 ORTHO05D007459 2.4e-84 318.2 483 39.8
FAN25G3291 Fragaria x ananassa HOM05D005971 ORTHO05D007459 3.3e-81 307.8 367 45.5
unitig_26.g10082 Utricularia gibba HOM05D005971 ORTHO05D007459 1.7e-74 285.4 1002 25.1
HPP92_026349 Vanilla planifolia HOM05D005971 ORTHO05D007459 2.3e-74 285.0 501 36.1
HPP92_026348 Vanilla planifolia HOM05D005971 ORTHO05D007459 4.6e-67 260.8 318 40.6
Nn7g37821 Nelumbo nucifera HOM05D005971 ORTHO05D007459 7.8e-67 260.0 196 62.8
Os06g0674800 Oryza sativa ssp. japonica HOM05D005971 ORTHO05D007459 1.4e-63 249.2 424 33.7
Cpa.g.sc10.38 Carica papaya HOM05D005971 ORTHO05D007459 1.9e-60 238.8 195 56.4
Peaxi162Scf00095g00013 Petunia axillaris HOM05D005971 ORTHO05D007459 7.1e-60 236.9 260 48.5
Peaxi162Scf01123g00008 Petunia axillaris HOM05D005971 ORTHO05D007459 2.4e-47 195.3 235 45.5
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 5.4e-44 184.1 141 63.1
CARHR003730 Cardamine hirsuta HOM05D005971 ORTHO05D007459 6.0e-43 180.6 234 42.7
GSVIVG01020426001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.0e-42 179.9 178 49.4
Peaxi162Scf01123g00003 Petunia axillaris HOM05D005971 ORTHO05D007459 1.8e-42 179.1 453 30.7
Atru.chr12.2180 Acer truncatum HOM05D005971 ORTHO05D007459 4.3e-41 174.5 221 44.3
arahy.Tifrunner.gnm1.ann1.Q40ZT9 Arachis hypogaea HOM05D005971 ORTHO05D007459 9.0e-39 166.8 188 44.7
VMungo1080G1570 Vigna mungo HOM05D005971 ORTHO05D007459 8.4e-37 160.2 138 52.2
Gohir.D13G157600 Gossypium hirsutum HOM05D005971 ORTHO05D007459 6.0e-35 154.1 194 44.3
GSVIVG01020425001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.1e-31 143.3 155 51.6
CDE12G0613 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 6.3e-24 117.5 103 51.5
Glyma.08G171633 Glycine max HOM05D005971 ORTHO05D007459 1.4e-20 106.3 78 59.0
Glyma.13G098800 Glycine max HOM05D005971 ORTHO05D007459 2.5e-20 105.5 152 40.8
Glyma.13G358366 Glycine max HOM05D005971 ORTHO05D007459 9.4e-20 103.6 152 40.1
COL.COLO4_20820 Corchorus olitorius HOM05D005971 ORTHO05D007459 1.6e-19 102.8 112 46.4
C03p00610 Brassica napus HOM05D005971 ORTHO05D040551 6.1e-19 100.9 158 38.0
Sc06g0001570 Simmondsia chinensis HOM05D005971 ORTHO05D007459 1.3e-16 93.2 90 48.9
Glyma.13G052600 Glycine max HOM05D005971 ORTHO05D007459 5.5e-12 77.8 126 34.9
Glyma.13G358300 Glycine max HOM05D005971 ORTHO05D007459 1.8e-10 72.8 175 30.9
GSVIVG01020432001 Vitis vinifera HOM05D005971 ORTHO05D007459 9.7e-09 67.0 63 49.2
BolC3t12626H Brassica oleracea HOM05D005971 ORTHO05D040551 2.8e-08 65.5 158 31.0
CBR_g36330 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-08 65.1 89 41.6
CAN.G1199.4 Capsicum annuum HOM05D002053 ORTHO05D007459 2.0e-06 59.3 47 57.4


User provided reference genes

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