Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 6.7e-218 760.4 380 100.0
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 5.5e-188 661.0 379 86.8
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 7.5e-185 650.6 378 84.4
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 1.7e-184 649.4 352 88.6
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 1.7e-184 649.4 352 88.6
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 4.1e-183 644.8 375 85.6
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 4.1e-183 644.8 378 84.1
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 7.0e-183 644.0 375 85.1
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 2.0e-182 642.5 366 85.8
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 3.5e-182 641.7 358 87.2
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 4.5e-182 641.3 371 85.7
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 5.9e-182 641.0 357 87.7
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 7.8e-182 640.6 350 88.9
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 7.8e-182 640.6 380 84.2
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 1.0e-181 640.2 365 85.2
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 2.3e-181 639.0 381 82.7
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 2.9e-181 638.6 374 85.3
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 5.0e-181 637.9 378 82.5
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 1.1e-180 636.7 379 83.1
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 1.1e-180 636.7 354 88.1
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 1.9e-180 636.0 358 87.7
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 1.9e-180 636.0 373 83.9
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 3.3e-180 635.2 350 88.0
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 4.3e-180 634.8 369 84.3
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 4.3e-180 634.8 371 85.7
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 5.6e-180 634.4 371 85.4
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 5.6e-180 634.4 348 87.1
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 5.6e-180 634.4 358 86.0
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 7.3e-180 634.0 377 84.6
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 9.5e-180 633.6 367 84.2
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 1.2e-179 633.3 373 83.4
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 1.2e-179 633.3 369 84.3
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 1.2e-179 633.3 358 86.3
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 1.6e-179 632.9 356 86.2
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 2.1e-179 632.5 369 84.3
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 4.7e-179 631.3 369 83.7
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 8.0e-179 630.6 371 83.8
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 1.0e-178 630.2 373 82.8
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 1.0e-178 630.2 373 82.8
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 1.8e-178 629.4 358 86.0
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 2.3e-178 629.0 356 87.1
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 2.3e-178 629.0 372 83.3
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 3.0e-178 628.6 347 86.7
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 3.0e-178 628.6 373 83.6
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 4.0e-178 628.2 371 83.0
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 4.0e-178 628.2 362 84.8
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 4.0e-178 628.2 378 82.0
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 6.8e-178 627.5 369 82.9
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 8.9e-178 627.1 362 84.3
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 1.2e-177 626.7 350 86.9
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 1.2e-177 626.7 353 86.1
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 1.2e-177 626.7 371 83.6
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 3.4e-177 625.2 368 83.2
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 4.4e-177 624.8 378 81.5
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.3e-176 623.2 363 84.6
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 1.3e-176 623.2 357 86.0
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 1.7e-176 622.9 350 86.3
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 1.7e-176 622.9 357 84.3
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 2.2e-176 622.5 365 84.7
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 2.9e-176 622.1 341 87.4
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 4.9e-176 621.3 357 83.8
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 6.4e-176 620.9 350 86.6
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 1.1e-175 620.2 360 83.9
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 1.4e-175 619.8 341 87.4
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 5.4e-175 617.8 363 83.2
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 5.4e-175 617.8 352 84.9
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 7.0e-175 617.5 380 80.8
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 7.0e-175 617.5 377 80.6
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 1.6e-174 616.3 350 85.1
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 2.0e-174 615.9 346 86.7
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 2.7e-174 615.5 354 85.3
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 2.7e-174 615.5 354 85.3
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 2.7e-174 615.5 365 81.9
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 2.7e-174 615.5 355 83.1
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 3.5e-174 615.1 376 81.4
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 3.5e-174 615.1 372 81.7
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 6.0e-174 614.4 352 84.1
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 6.0e-174 614.4 377 79.6
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 6.0e-174 614.4 377 79.6
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 7.8e-174 614.0 354 85.3
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 3.9e-173 611.7 401 76.8
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 3.9e-173 611.7 377 79.3
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 6.6e-173 610.9 330 88.8
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 8.6e-173 610.5 340 86.2
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 9.5e-172 607.1 358 83.2
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 9.5e-172 607.1 351 85.5
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 1.2e-171 606.7 335 86.0
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 6.2e-171 604.4 341 85.0
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 1.1e-170 603.6 355 82.3
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 8.9e-170 600.5 353 83.6
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 8.9e-170 600.5 356 82.6
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 1.7e-168 596.3 349 84.0
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 1.6e-166 589.7 364 79.1
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 6.6e-165 584.3 378 79.6
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 8.6e-165 583.9 330 86.1
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.1e-162 577.0 357 80.4
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 3.1e-162 575.5 341 81.2
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 8.9e-162 573.9 344 80.2
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 4.9e-160 568.2 396 73.0
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 6.4e-160 567.8 333 80.2
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 1.7e-157 559.7 311 88.4
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 3.1e-154 548.9 377 74.5
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 9.9e-153 543.9 375 73.6
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 2.1e-150 536.2 315 79.4
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 9.3e-143 510.8 339 70.8
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.6e-139 500.0 349 73.4
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 5.1e-133 478.4 262 88.5
Cpa.g.sc71.17 Carica papaya HOM05D005615 ORTHO05D007558 3.3e-132 475.7 269 84.8
HPP92_002777 Vanilla planifolia HOM05D005615 ORTHO05D007558 1.2e-129 467.2 269 84.0
FvH4_4g11460 Fragaria vesca HOM05D005615 ORTHO05D007558 3.2e-127 459.1 248 87.5
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 1.6e-123 446.8 246 89.0
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 7.1e-119 431.4 320 70.3
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 1.5e-108 397.1 317 60.9
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 2.5e-108 396.4 320 61.6
COL.COLO4_14419 Corchorus olitorius HOM05D005615 ORTHO05D007558 6.5e-104 381.7 213 88.3
FAN07G1681 Fragaria x ananassa HOM05D005615 ORTHO05D007558 1.3e-99 367.5 200 84.5
Zm00001eb198320 Zea mays HOM05D005615 ORTHO05D007558 1.4e-98 364.0 221 83.7
Peaxi162Scf00375g00079 Petunia axillaris HOM05D005615 ORTHO05D007558 3.2e-95 352.8 211 83.4
Haze_27367 Corylus avellana HOM05D005615 ORTHO05D007558 1.7e-80 303.9 298 51.3
vmacro00603 Vaccinium macrocarpon HOM05D005615 ORTHO05D007558 7.5e-76 288.5 234 64.1
AL3G36550 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 3.3e-55 219.9 121 87.6
CBR_g54828 Chara braunii HOM05D005615 ORTHO05D007558 7.5e-52 208.8 136 69.1
AL4G42060 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 8.3e-51 205.3 211 55.5
Actinidia27060 Actinidia chinensis HOM05D005615 ORTHO05D007558 4.3e-47 193.0 97 92.8
CBR_g54834 Chara braunii HOM05D005615 ORTHO05D007558 3.3e-39 166.8 104 76.9
Cpa.g.sc71.16 Carica papaya HOM05D005615 ORTHO05D007558 2.7e-33 147.1 98 77.6
CBR_g54836 Chara braunii HOM05D005615 ORTHO05D000002 8.7e-32 142.1 86 79.1
HPP92_002776 Vanilla planifolia HOM05D005615 ORTHO05D007558 2.0e-28 131.0 84 79.8
Psat3g051440 Pisum sativum HOM05D005615 ORTHO05D031631 1.2e-25 121.7 87 71.3
CDE04G1318 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 2.7e-25 120.6 75 80.0
Cpa.g.c45785 Carica papaya HOM05D005615 ORTHO05D007558 1.3e-24 118.2 60 88.3
Eucgr.A00259 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.4e-18 98.2 71 64.8
SalBow8G4084 Salvia bowleyana HOM05D005615 ORTHO05D007558 1.9e-18 97.8 66 71.2
Zm00001eb285620 Zea mays HOM05D001443 ORTHO05D001352 1.9e-18 97.8 75 66.7


User provided reference genes

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