Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G04094 Aquilegia oxysepala HOM05D005923 ORTHO05D007376 0.0e+00 1499.2 745 100.0
TAR365G1048 Trochodendron aralioides HOM05D005923 ORTHO05D007376 1.1e-275 953.4 751 65.5
PSO732G0688 Papaver somniferum HOM05D005923 ORTHO05D007376 1.1e-269 933.3 755 62.0
PSO675G7036 Papaver somniferum HOM05D005923 ORTHO05D007376 7.6e-266 920.6 743 62.3
Haze_04596 Corylus avellana HOM05D005923 ORTHO05D007376 1.8e-254 882.9 713 62.6
Cfa006234 Carpinus fangiana HOM05D005923 ORTHO05D007376 4.8e-252 874.8 713 61.9
CiPaw.07G083600 Carya illinoinensis HOM05D005923 ORTHO05D007376 1.1e-251 873.6 712 61.9
CSS0002064 Camellia sinensis var. sinensis HOM05D005923 ORTHO05D007376 1.2e-250 870.2 694 62.5
RcHm_v2.0_Chr3g0447491 Rosa chinensis HOM05D005923 ORTHO05D007376 8.7e-246 854.0 708 61.3
Ciclev10011172m.g Citrus clementina HOM05D005923 ORTHO05D007376 1.9e-245 852.8 712 60.1
QL10p015972 Quercus lobata HOM05D005923 ORTHO05D007376 2.2e-244 849.4 695 60.9
Actinidia03247 Actinidia chinensis HOM05D005923 ORTHO05D007376 6.3e-244 847.8 744 58.5
Duzib128G1624 Durio zibethinus HOM05D005923 ORTHO05D007376 3.1e-243 845.5 707 60.1
Atru.chr12.1669 Acer truncatum HOM05D005923 ORTHO05D007376 2.0e-242 842.8 752 57.3
MBI08_g20603_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 5.9e-242 841.3 751 58.3
Manes.12G002100 Manihot esculenta HOM05D005923 ORTHO05D007376 1.3e-241 840.1 752 56.5
Potri.008G077000 Populus trichocarpa HOM05D005923 ORTHO05D007376 2.9e-241 839.0 752 56.9
TWI18G0568 Tripterygium wilfordii HOM05D005923 ORTHO05D007376 3.8e-241 838.6 745 57.4
TPR.G31231 Trifolium pratense HOM05D005923 ORTHO05D007376 6.5e-241 837.8 710 59.4
Potri.010G180800 Populus trichocarpa HOM05D005923 ORTHO05D007376 2.5e-240 835.9 757 56.8
CANSAT21G0310 Cannabis sativa HOM05D005923 ORTHO05D007376 1.2e-239 833.6 752 56.4
GSVIVG01003759001 Vitis vinifera HOM05D005923 ORTHO05D007376 6.1e-239 831.2 740 58.6
Ca_08014_v3 Cicer arietinum L. HOM05D005923 ORTHO05D007376 7.9e-239 830.9 693 60.0
FvH4_6g00140 Fragaria vesca HOM05D005923 ORTHO05D007376 1.4e-238 830.1 692 60.0
ClCG11G012400 Citrullus lanatus HOM05D005923 ORTHO05D007376 1.8e-238 829.7 714 58.3
CsaV3_2G010290 Cucumis sativus L. HOM05D005923 ORTHO05D007376 1.8e-238 829.7 760 56.2
Gorai.003G088600 Gossypium raimondii HOM05D005923 ORTHO05D007376 5.1e-238 828.2 744 57.8
Sed0021637 Sechium edule HOM05D005923 ORTHO05D007376 5.1e-238 828.2 747 57.3
Gohir.D03G071400 Gossypium hirsutum HOM05D005923 ORTHO05D007376 6.7e-238 827.8 744 57.8
Sabra08G0057400 Salix brachista HOM05D005923 ORTHO05D007376 8.8e-238 827.4 751 56.6
Glyma.18G244700 Glycine max HOM05D005923 ORTHO05D007376 1.5e-237 826.6 689 60.8
COL.COLO4_36605 Corchorus olitorius HOM05D005923 ORTHO05D007376 5.7e-237 824.7 747 58.1
PGR031G2609 Punica granatum HOM05D005923 ORTHO05D007376 7.4e-237 824.3 709 58.5
Psat3g105160 Pisum sativum HOM05D005923 ORTHO05D007376 3.7e-236 822.0 696 59.6
Cpa.g.sc99.42 Carica papaya HOM05D005923 ORTHO05D007376 8.2e-236 820.8 704 59.2
Medtr7g080490 Medicago truncatula HOM05D005923 ORTHO05D007376 1.1e-235 820.5 711 59.2
Lj1g0007040 Lotus japonicus HOM05D005923 ORTHO05D007376 1.4e-235 820.1 708 58.6
MD12G1262500 Malus domestica HOM05D005923 ORTHO05D007376 2.4e-235 819.3 695 58.4
THA.LOC104827232 Tarenaya hassleriana HOM05D005923 ORTHO05D007376 2.4e-235 819.3 748 55.7
Rhsim05G0165000 Rhododendron simsii HOM05D005923 ORTHO05D007376 4.5e-234 815.1 747 55.7
Glyma.09G248100 Glycine max HOM05D005923 ORTHO05D007376 3.8e-233 812.0 688 59.7
Phvul.008G051900 Phaseolus vulgaris HOM05D005923 ORTHO05D007376 3.2e-232 808.9 693 59.2
Lalb_Chr03g0038141 Lupinus albus HOM05D005923 ORTHO05D007376 4.2e-232 808.5 709 58.7
Prupe.6G364500 Prunus persica HOM05D005923 ORTHO05D007376 1.2e-231 807.0 710 57.7
Actinidia06787 Actinidia chinensis HOM05D005923 ORTHO05D007376 1.5e-229 800.0 751 56.3
arahy.Tifrunner.gnm1.ann1.VQ08NH Arachis hypogaea HOM05D005923 ORTHO05D007376 3.7e-228 795.4 757 55.2
VMungo1383G0851 Vigna mungo HOM05D005923 ORTHO05D007376 4.8e-228 795.0 692 58.7
Sc16g0010600 Simmondsia chinensis HOM05D005923 ORTHO05D007376 8.2e-228 794.3 744 56.6
Thhalv10020144m.g Eutrema salsugineum HOM05D005923 ORTHO05D007376 9.1e-227 790.8 743 54.8
Aa31LG5G13800 Aethionema arabicum HOM05D005923 ORTHO05D000304 3.5e-226 788.9 671 58.0
AUR62014468 Chenopodium quinoa HOM05D005923 ORTHO05D007376 3.5e-226 788.9 748 55.3
Sabra10G0138600 Salix brachista HOM05D005923 ORTHO05D007376 3.5e-226 788.9 718 56.4
AT3G03305 Arabidopsis thaliana HOM05D005923 ORTHO05D007376 1.7e-225 786.6 748 54.7
Sp3g02330 Schrenkiella parvula HOM05D005923 ORTHO05D007376 2.2e-225 786.2 690 56.8
Nitab4.5_0001003g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 2.9e-225 785.8 728 56.0
EL10Ac4g10017 Beta vulgaris HOM05D005923 ORTHO05D007376 6.5e-225 784.6 716 57.1
Hund21927 Selenicereus undatus HOM05D005923 ORTHO05D007376 1.9e-224 783.1 711 56.4
Ah.04g159240 Amaranthus hybridus HOM05D005923 ORTHO05D007376 2.5e-224 782.7 736 55.2
Carub.0003s0247 Capsella rubella HOM05D005923 ORTHO05D007376 7.2e-224 781.2 690 57.0
A05p43880 Brassica napus HOM05D005923 ORTHO05D007376 1.2e-223 780.4 687 56.5
BraA05t23125Z Brassica rapa HOM05D005923 ORTHO05D007376 2.1e-223 779.6 687 56.2
CARHR077340 Cardamine hirsuta HOM05D005923 ORTHO05D007376 2.6e-221 772.7 745 53.3
Dinv21358 Davidia involucrata HOM05D005923 ORTHO05D007376 2.6e-221 772.7 621 62.5
Peaxi162Scf00296g01112 Petunia axillaris HOM05D005923 ORTHO05D007376 3.3e-221 772.3 706 56.7
AL3G12930 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 4.4e-221 771.9 691 56.0
C05p63470 Brassica napus HOM05D005923 ORTHO05D007376 7.5e-221 771.2 732 53.6
BolC5t35012H Brassica oleracea HOM05D005923 ORTHO05D007376 3.7e-220 768.8 741 53.2
AUR62034530 Chenopodium quinoa HOM05D005923 ORTHO05D007376 8.2e-220 767.7 741 53.8
Eucgr.B01459 Eucalyptus grandis HOM05D005923 ORTHO05D007376 8.2e-220 767.7 719 55.5
MSTRG.27409 Avicennia marina HOM05D005923 ORTHO05D007376 7.0e-219 764.6 705 55.9
arahy.Tifrunner.gnm1.ann1.51VLQD Arachis hypogaea HOM05D005923 ORTHO05D007376 1.6e-218 763.5 740 54.5
CAN.G321.22 Capsicum annuum HOM05D005923 ORTHO05D007376 2.7e-218 762.7 707 56.3
HPP92_013562 Vanilla planifolia HOM05D005923 ORTHO05D007376 8.5e-217 757.7 752 54.0
Sopen11g004360 Solanum pennellii HOM05D005923 ORTHO05D007376 4.2e-216 755.4 707 55.9
Os01g0894000 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 2.7e-215 752.7 751 51.5
SalBow1G7804 Salvia bowleyana HOM05D005923 ORTHO05D007376 1.8e-214 750.0 690 56.4
Zm00001eb144980 Zea mays HOM05D005923 ORTHO05D007376 6.8e-214 748.0 757 51.1
Cc09_g04040 Coffea canephora HOM05D005923 ORTHO05D007376 6.3e-212 741.5 715 54.8
Oeu034703.2 Olea europaea HOM05D005923 ORTHO05D007376 1.7e-209 733.4 748 51.9
Thecc.05G188500 Theobroma cacao HOM05D005923 ORTHO05D007376 2.9e-209 732.6 624 59.3
Migut.F02096 Erythranthe guttata HOM05D005923 ORTHO05D007376 2.8e-207 726.1 713 53.9
ATR0824G241 Amborella trichopoda HOM05D005923 ORTHO05D007376 4.4e-205 718.8 699 53.2
DCAR_031594 Daucus carota HOM05D005923 ORTHO05D007376 1.3e-204 717.2 650 57.1
SalBow1G1244 Salvia bowleyana HOM05D005923 ORTHO05D007376 1.4e-203 713.8 655 56.6
Lsat_1_v5_gn_0_14641 Lactuca sativa HOM05D005923 ORTHO05D007376 2.4e-203 713.0 742 50.4
ECA232G3428 Erigeron canadensis HOM05D005923 ORTHO05D007376 3.5e-202 709.1 675 54.5
SGA_v2.0_scaffold62G21491 Striga asiatica HOM05D005923 ORTHO05D007376 5.0e-201 705.3 727 52.8
Solyc11g008570.2 Solanum lycopersicum HOM05D005923 ORTHO05D007376 6.6e-201 704.9 739 52.0
Os07g0274100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 4.4e-197 692.2 711 49.9
HanXRQChr10g0283011 Helianthus annuus HOM05D005923 ORTHO05D007376 5.7e-197 691.8 694 53.2
PGSC0003DMG400016251 Solanum tuberosum HOM05D005923 ORTHO05D007376 4.0e-190 669.1 634 54.7
BcaC05g30305 Brassica carinata HOM05D000399 ORTHO05D000304 2.5e-184 649.8 744 48.5
CDE09G0389 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 1.6e-178 630.6 501 62.5
Gohir.A02G106500 Gossypium hirsutum HOM05D005923 ORTHO05D007376 5.1e-177 625.5 549 58.1
Lj8A198T52 Lonicera japonica HOM05D005923 ORTHO05D007376 2.1e-167 593.6 642 52.5
unitig_46.g18570 Utricularia gibba HOM05D005923 ORTHO05D007376 1.8e-166 590.5 695 45.9
Nitab4.5_0009631g0020 Nicotiana tabacum HOM05D005923 ORTHO05D007376 5.2e-166 589.0 727 46.6
Ah.06g195310 Amaranthus hybridus HOM05D005923 ORTHO05D007376 9.9e-165 584.7 589 53.3
MELO3C008611.2 Cucumis melo HOM05D005923 ORTHO05D007376 3.1e-134 483.4 414 59.2
arahy.Tifrunner.gnm1.ann1.25XALN Arachis hypogaea HOM05D005923 ORTHO05D007376 1.0e-132 478.4 535 49.5
MBI12_g21502_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 2.2e-127 460.7 734 36.6
Mapoly0048s0028 Marchantia polymorpha HOM05D005923 ORTHO05D007376 1.2e-125 454.9 783 36.7
SMO228G0200 Selaginella moellendorffii HOM05D005923 ORTHO05D007376 5.5e-123 446.0 664 39.2
ATR0564G177 Amborella trichopoda HOM05D005923 ORTHO05D007376 7.9e-122 442.2 688 39.0
AagrBONN_evm.TU.Sc2ySwM_344.5471 Anthoceros agrestis HOM05D005923 ORTHO05D007376 1.0e-121 441.8 641 40.4
HPP92_028167 Vanilla planifolia HOM05D005923 ORTHO05D007376 3.0e-121 440.3 749 35.5
Pp3c8_13610 Physcomitrium patens HOM05D005923 ORTHO05D007376 9.1e-118 428.7 812 34.7
Atru.chr12.1657 Acer truncatum HOM05D005923 ORTHO05D007376 1.1e-112 411.8 421 51.3
Pp3c23_21040 Physcomitrium patens HOM05D005923 ORTHO05D007376 1.0e-108 398.7 746 34.7
vmacro19542 Vaccinium macrocarpon HOM05D005923 ORTHO05D007376 1.4e-102 378.3 365 52.1
Nn013s41460 Nelumbo nucifera HOM05D005923 ORTHO05D007376 3.1e-102 377.1 335 56.1
MD04G1248100 Malus domestica HOM05D005923 ORTHO05D007376 3.1e-73 280.8 338 47.0
Actinidia06786 Actinidia chinensis HOM05D005923 ORTHO05D007376 2.1e-69 268.1 288 52.1
Zm00001eb398210 Zea mays HOM05D005923 ORTHO05D007376 2.0e-64 251.5 561 31.4
Nn1g09626 Nelumbo nucifera HOM05D005923 ORTHO05D007376 6.8e-57 226.5 181 64.6
Atru.chr12.1696 Acer truncatum HOM05D005923 ORTHO05D007376 4.4e-56 223.8 190 57.4
CDE06G0114 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 1.3e-55 222.2 356 38.2
Atru.chr12.1663 Acer truncatum HOM05D005923 ORTHO05D007376 5.1e-52 210.3 142 72.5
MD04G1248200 Malus domestica HOM05D005923 ORTHO05D007376 7.1e-46 189.9 167 55.1
Atru.chr12.1695 Acer truncatum HOM05D005923 ORTHO05D007376 3.3e-43 181.0 179 54.2
Pp3c20_18430 Physcomitrium patens HOM05D005923 ORTHO05D007376 9.9e-40 169.5 483 28.8
Os03g0260100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 8.4e-31 139.8 180 40.0
CDE02G4030 Ceratophyllum demersum HOM05D005923 ORTHO05D000203 2.8e-26 124.8 103 54.4
Atru.chr12.1656 Acer truncatum HOM05D005923 ORTHO05D007376 2.4e-25 121.7 123 52.8
AL3G13260 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 4.6e-21 107.5 76 63.2
Cre11.g478456 Chlamydomonas reinhardtii HOM05D005923 ORTHO05D007376 4.2e-14 84.3 412 24.3
Nitab4.5_0001853g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.3e-10 72.8 79 50.6
Nitab4.5_0001853g0060 Nicotiana tabacum HOM05D005923 ORTHO05D007376 4.8e-10 70.9 79 48.1
MD04G1248000 Malus domestica HOM05D005923 ORTHO05D007376 9.1e-09 66.6 81 42.0
Ciclev10013254m.g Citrus clementina HOM05D005923 ORTHO05D007376 4.5e-08 64.3 102 41.2
TAR636G0452 Trochodendron aralioides HOM05D000809 ORTHO05D007735 1.0e-07 63.2 86 47.7
CDE07G1406 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 1.3e-07 62.8 76 50.0
SMO335G0023 Selaginella moellendorffii HOM05D047118 ORTHO05D007376 2.9e-07 61.6 174 30.5


User provided reference genes

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