Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 2.1e-160 568.9 275 100.0
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 2.0e-126 456.1 275 77.5
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 2.6e-118 429.1 265 75.5
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 1.7e-117 426.4 248 76.2
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 1.4e-116 423.3 267 72.3
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 2.4e-116 422.5 265 74.7
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 2.0e-115 419.5 264 73.9
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 2.7e-115 419.1 275 70.9
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.5e-115 418.3 245 78.4
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 2.5e-113 412.5 275 70.5
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 5.5e-113 411.4 264 74.2
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 9.4e-113 410.6 270 71.1
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 1.2e-112 410.2 272 69.5
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 8.0e-112 407.5 274 69.3
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 8.0e-112 407.5 275 69.8
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.0e-111 407.1 265 72.8
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 3.0e-111 405.6 260 71.5
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 4.0e-111 405.2 266 69.9
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 4.0e-111 405.2 263 70.3
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 6.8e-111 404.4 265 71.3
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 6.8e-111 404.4 274 69.0
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 6.8e-111 404.4 274 69.0
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 2.6e-110 402.5 275 70.2
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 5.7e-110 401.4 262 70.2
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 9.8e-110 400.6 264 70.8
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 1.3e-109 400.2 275 69.5
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 1.3e-109 400.2 275 68.7
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 2.2e-109 399.4 275 67.3
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 3.7e-109 398.7 269 69.9
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 3.7e-109 398.7 257 71.6
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 1.1e-108 397.1 267 71.2
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 1.1e-108 397.1 266 68.4
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.4e-108 396.7 275 66.2
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.4e-108 396.7 275 66.2
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 4.1e-108 395.2 276 65.6
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 9.1e-108 394.0 264 68.9
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 7.7e-107 391.0 273 66.7
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 1.0e-106 390.6 285 65.6
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 2.3e-106 389.4 267 66.3
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 1.1e-105 387.1 267 67.0
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 1.1e-105 387.1 267 65.9
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 1.9e-105 386.3 266 67.7
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 2.5e-105 386.0 262 66.8
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 3.3e-105 385.6 262 66.4
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 4.2e-105 385.2 264 67.0
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 9.5e-105 384.0 290 63.4
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 1.2e-104 383.6 263 67.7
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 1.6e-104 383.3 269 66.9
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 1.8e-103 379.8 263 66.2
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 4.0e-103 378.6 275 65.1
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 8.9e-103 377.5 268 66.0
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 1.3e-101 373.6 249 67.1
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 2.2e-101 372.9 264 65.5
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 2.9e-101 372.5 272 65.8
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 1.1e-100 370.5 265 62.6
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 1.4e-100 370.2 249 67.1
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 1.4e-100 370.2 276 63.8
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 2.4e-100 369.4 266 65.4
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 3.2e-100 369.0 266 65.8
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 3.2e-100 369.0 275 62.9
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 4.1e-100 368.6 266 66.2
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 5.4e-100 368.2 263 64.6
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 9.2e-100 367.5 248 66.9
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 1.6e-99 366.7 275 64.0
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 1.0e-98 364.0 266 63.2
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 1.1e-97 360.5 265 65.7
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.5e-97 359.4 259 66.4
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 2.5e-97 359.4 256 64.5
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 5.6e-97 358.2 273 61.5
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 8.0e-96 354.4 255 67.1
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 2.3e-95 352.8 254 63.0
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 3.1e-95 352.4 244 69.7
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 1.5e-94 350.1 254 62.2
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 2.0e-94 349.7 222 70.7
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 4.3e-89 332.0 220 70.5
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 4.3e-89 332.0 233 67.4
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 1.8e-87 326.6 245 59.2
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 2.3e-87 326.2 244 63.9
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 4.0e-87 325.5 294 57.8
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 8.9e-87 324.3 244 63.9
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 1.7e-85 320.1 200 72.0
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 7.1e-84 314.7 246 63.4
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 2.1e-83 313.2 217 66.4
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 3.0e-82 309.3 192 74.0
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 4.3e-81 305.4 232 61.2
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 3.4e-78 295.8 172 77.9
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 1.9e-76 290.0 236 54.2
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 2.4e-76 289.7 238 50.4
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 2.7e-75 286.2 175 73.7
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 4.7e-72 275.4 237 50.6
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 1.3e-69 267.3 270 52.2
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 2.5e-65 253.1 185 67.6
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 5.6e-65 251.9 165 75.8
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 5.8e-62 241.9 136 77.9
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 3.1e-55 219.5 158 61.4
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 1.2e-54 217.6 140 72.9
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 9.3e-52 208.0 144 67.4
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.3e-48 197.6 131 72.5
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.3e-48 197.6 131 72.5
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 6.2e-48 195.3 141 68.1
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 4.0e-47 192.6 129 67.4
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 4.5e-46 189.1 148 62.2
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 5.1e-42 175.6 111 69.4
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 4.5e-38 162.5 150 53.3
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 6.7e-34 148.7 240 32.9
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 5.0e-29 132.5 105 57.1
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 5.1e-26 122.5 253 36.0
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 1.5e-25 120.9 169 42.6
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 2.5e-25 120.2 95 60.0
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 1.2e-22 111.3 111 47.7
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 1.5e-22 110.9 62 74.2
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.0e-17 94.0 44 93.2
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.4e-17 92.8 44 93.2
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.4e-17 92.8 44 93.2
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 1.3e-16 91.3 62 64.5
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 7.7e-14 82.0 55 61.8
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 1.1e-12 78.2 161 31.1
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 8.0e-11 72.0 40 82.5
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 8.0e-11 72.0 40 82.5
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 5.2e-10 69.3 41 78.0
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 1.7e-08 64.3 59 52.5
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 2.2e-08 63.9 59 52.5
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.0e-06 57.4 77 42.9
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.0e-06 57.4 77 42.9
HanXRQChr12g0365531 Helianthus annuus HOM05D006283 ORTHO05D007727 3.5e-06 56.6 86 40.7
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 7.7e-06 55.5 36 63.9


User provided reference genes

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