Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 9.3e-167 590.1 295 100.0
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 4.7e-78 295.4 281 57.7
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 4.3e-71 272.3 285 57.9
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 2.6e-68 263.1 293 54.9
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.3e-67 260.8 275 55.3
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 9.3e-66 254.6 268 53.0
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 2.1e-65 253.4 268 52.6
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 6.0e-65 251.9 268 53.4
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 2.3e-64 250.0 286 52.4
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 8.7e-64 248.1 276 55.8
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 2.1e-62 243.4 273 54.6
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 1.8e-61 240.4 268 50.7
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 2.0e-60 236.9 293 50.5
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 4.5e-60 235.7 283 52.3
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 1.3e-59 234.2 290 51.0
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 2.9e-59 233.0 273 53.5
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 3.8e-59 232.6 291 50.5
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 8.4e-59 231.5 290 48.6
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 1.9e-58 230.3 287 49.8
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.9e-58 230.3 276 53.3
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 1.9e-58 230.3 275 51.6
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.2e-57 227.6 276 52.5
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 1.2e-57 227.6 276 52.5
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 7.9e-57 224.9 259 51.7
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 3.0e-56 223.0 274 49.6
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 5.1e-56 222.2 276 49.6
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 3.3e-55 219.5 288 46.9
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 3.3e-55 219.5 273 50.2
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.3e-54 217.6 277 46.9
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 2.8e-54 216.5 280 48.6
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 4.8e-54 215.7 280 48.9
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 6.2e-54 215.3 276 47.1
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 1.1e-53 214.5 279 48.0
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 4.0e-53 212.6 273 45.8
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 5.3e-53 212.2 279 48.0
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 1.2e-52 211.1 273 50.5
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 3.8e-51 206.1 265 47.5
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 6.5e-51 205.3 291 47.1
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 6.5e-51 205.3 272 46.7
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 6.5e-51 205.3 258 51.6
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 2.5e-50 203.4 253 49.4
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 5.5e-50 202.2 295 46.8
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 1.2e-49 201.1 292 45.5
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 3.5e-49 199.5 205 56.1
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 3.5e-49 199.5 205 56.1
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 3.5e-49 199.5 274 46.4
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 1.3e-48 197.6 289 47.8
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 3.0e-48 196.4 284 46.1
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 3.9e-48 196.1 278 50.7
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 8.7e-48 194.9 270 45.6
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 2.5e-47 193.4 285 46.7
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 1.6e-46 190.7 245 46.5
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 2.2e-46 190.3 259 48.3
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 4.8e-46 189.1 258 46.5
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 1.8e-45 187.2 268 49.3
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 6.5e-43 178.7 264 44.3
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 7.2e-42 175.3 254 46.9
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 7.2e-42 175.3 208 55.3
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 1.2e-41 174.5 348 40.5
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.6e-41 174.1 337 40.7
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 2.7e-41 173.3 242 46.7
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 4.6e-41 172.6 302 40.7
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 4.6e-41 172.6 302 40.7
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 4.6e-41 172.6 260 44.6
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 6.1e-41 172.2 303 41.3
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 1.0e-40 171.4 240 45.4
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 1.0e-40 171.4 304 39.8
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 1.8e-40 170.6 337 38.3
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 3.0e-40 169.9 279 44.8
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 6.7e-40 168.7 237 47.3
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 6.7e-40 168.7 297 42.1
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 1.5e-39 167.5 231 48.9
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 2.5e-39 166.8 301 40.2
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 2.5e-39 166.8 301 40.2
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 2.5e-39 166.8 353 39.7
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 3.3e-39 166.4 302 42.7
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 3.3e-39 166.4 301 41.9
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 4.3e-39 166.0 278 40.6
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 5.7e-39 165.6 304 41.1
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 2.4e-37 160.2 283 40.6
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 2.6e-36 156.8 281 39.9
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 3.4e-36 156.4 228 49.1
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 1.0e-35 154.8 278 39.6
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 1.1e-34 151.4 204 45.1
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 2.5e-34 150.2 302 37.1
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 5.5e-34 149.1 336 39.0
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.6e-33 147.5 285 41.4
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 2.7e-33 146.7 245 42.0
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 7.9e-33 145.2 269 39.8
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 3.9e-32 142.9 286 40.9
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 5.1e-32 142.5 237 40.5
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 3.3e-31 139.8 227 44.5
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 5.7e-31 139.0 271 38.4
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 7.4e-31 138.7 216 41.7
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 8.2e-30 135.2 221 39.8
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 8.2e-30 135.2 221 39.8
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 3.1e-29 133.3 262 39.7
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 9.7e-23 111.7 227 35.2
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 3.2e-18 96.7 142 42.3
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 4.7e-17 92.8 117 47.9
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.0e-15 87.4 213 33.8
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.8e-13 80.9 91 51.6
BcaC01g06536 Brassica carinata HOM05D007298 ORTHO05D009226 6.1e-09 65.9 96 46.9
C01p22270 Brassica napus HOM05D007298 ORTHO05D009226 1.5e-07 61.2 130 40.0
BcaC09g50700 Brassica carinata HOM05D007298 ORTHO05D009226 4.4e-07 59.7 96 44.8
BolC1t02157H Brassica oleracea HOM05D007298 ORTHO05D009226 4.4e-07 59.7 96 44.8


User provided reference genes

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